RNA–Protein interactions for RNA: ENST00000367818.3

XCL1-201, Transcript of X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCL1, Length 1,367 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1-201ENST00000367818 AEBP2Q6ZN18 517 aaPredicted RBP29.01■■■□□ 2.24
XCL1-201ENST00000367818 CHIC1Q5VXU3 224 aa27.16■■□□□ 1.94
XCL1-201ENST00000367818 SENP3Q9H4L4 574 aaPredicted RBP24.9■■□□□ 1.58
XCL1-201ENST00000367818 PHF23Q9BUL5 403 aaPredicted RBP24.44■■□□□ 1.5
XCL1-201ENST00000367818 FOXD1Q16676 465 aa23.23■■□□□ 1.31
XCL1-201ENST00000367818 POTEDQ86YR6 584 aa22.49■■□□□ 1.19
XCL1-201ENST00000367818 MSH5O43196 834 aa22.02■■□□□ 1.12
XCL1-201ENST00000367818 PIAS4Q8N2W9 510 aaPredicted RBP21.6■■□□□ 1.05
XCL1-201ENST00000367818 PLPPR3Q6T4P5 718 aa21.31■■□□□ 1
XCL1-201ENST00000367818 PPP6R1Q9UPN7 881 aa21.23■□□□□ 0.99
XCL1-201ENST00000367818 ADRA2BP18089 450 aa21.14■□□□□ 0.98
XCL1-201ENST00000367818 DMRT2Q9Y5R5 561 aa19.64■□□□□ 0.73
XCL1-201ENST00000367818 MAPK8IP2Q13387 824 aaPredicted RBP19.57■□□□□ 0.72
XCL1-201ENST00000367818 SCAF1Q9H7N4 1312 aaKnown RBP19.38■□□□□ 0.69
XCL1-201ENST00000367818 CACNB1Q02641 598 aaPredicted RBP19.24■□□□□ 0.67
XCL1-201ENST00000367818 DCAF8L1A6NGE4 600 aa18.85■□□□□ 0.61
XCL1-201ENST00000367818 RNF39Q9H2S5 420 aa18.71■□□□□ 0.59
XCL1-201ENST00000367818 HOXD11P31277 338 aaPredicted RBP18.67■□□□□ 0.58
XCL1-201ENST00000367818 PPP4R3CPQ6ZMV5 832 aa18.57■□□□□ 0.56
XCL1-201ENST00000367818 C1QBPQ07021 282 aaKnown RBP18.42■□□□□ 0.54
XCL1-201ENST00000367818 CNKSR2Q8WXI2 1034 aa18.39■□□□□ 0.53
XCL1-201ENST00000367818 RNF216Q9NWF9 866 aaPredicted RBP18.38■□□□□ 0.53
XCL1-201ENST00000367818 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
XCL1-201ENST00000367818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.79■□□□□ 0.44
XCL1-201ENST00000367818 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
XCL1-201ENST00000367818 POTEHQ6S545 545 aa17.51■□□□□ 0.39
XCL1-201ENST00000367818 NPM3O75607 178 aaKnown RBP17.43■□□□□ 0.38
XCL1-201ENST00000367818 U3KPZ7 1027 aaPredicted RBP17.36■□□□□ 0.37
XCL1-201ENST00000367818 DSG3P32926 999 aa17.31■□□□□ 0.36
XCL1-201ENST00000367818 CAPN15O75808 1086 aa17.28■□□□□ 0.36
XCL1-201ENST00000367818 SPINK5Q9NQ38 1064 aaPredicted RBP17.27■□□□□ 0.35
XCL1-201ENST00000367818 TRHP20396 242 aaPredicted RBP16.86■□□□□ 0.29
XCL1-201ENST00000367818 APLP2Q06481 763 aa16.85■□□□□ 0.29
XCL1-201ENST00000367818 ZNF219Q9P2Y4 722 aaPredicted RBP16.84■□□□□ 0.29
XCL1-201ENST00000367818 ABCB7O75027 752 aa16.82■□□□□ 0.28
XCL1-201ENST00000367818 SLC4A2P04920 1241 aa16.79■□□□□ 0.28
XCL1-201ENST00000367818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.67■□□□□ 0.26
XCL1-201ENST00000367818 HNRNPUL2Q1KMD3 747 aaKnown RBP16.67■□□□□ 0.26
XCL1-201ENST00000367818 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
XCL1-201ENST00000367818 KCNA4P22459 653 aa16.56■□□□□ 0.24
XCL1-201ENST00000367818 SAMD1Q6SPF0 538 aaPredicted RBP16.54■□□□□ 0.24
XCL1-201ENST00000367818 CHRDL2Q6WN34 429 aa16.43■□□□□ 0.22
XCL1-201ENST00000367818 POLA2Q14181 598 aa16.25■□□□□ 0.19
XCL1-201ENST00000367818 MYCNP04198 464 aaPredicted RBP16.18■□□□□ 0.18
XCL1-201ENST00000367818 SP7Q8TDD2 431 aaPredicted RBP16.14■□□□□ 0.17
XCL1-201ENST00000367818 AKT1S1Q96B36 256 aa16.05■□□□□ 0.16
XCL1-201ENST00000367818 ZBTB12Q9Y330 459 aaPredicted RBP15.94■□□□□ 0.14
XCL1-201ENST00000367818 PIP4P2Q8N4L2 257 aa15.89■□□□□ 0.13
XCL1-201ENST00000367818 REM2Q8IYK8 340 aaPredicted RBP15.87■□□□□ 0.13
XCL1-201ENST00000367818 OSCARQ8IYS5 282 aa15.8■□□□□ 0.12
XCL1-201ENST00000367818 ATF5Q9Y2D1 282 aaPredicted RBP15.79■□□□□ 0.12
XCL1-201ENST00000367818 HAX1O00165 279 aa15.76■□□□□ 0.11
XCL1-201ENST00000367818 PITPNM1O00562 1244 aa15.74■□□□□ 0.11
XCL1-201ENST00000367818 FXR2P51116 673 aaKnown RBP eCLIP15.7■□□□□ 0.1
XCL1-201ENST00000367818 FOXD4L1Q9NU39 408 aa15.67■□□□□ 0.1
XCL1-201ENST00000367818 SLC4A1APQ9BWU0 796 aaKnown RBP15.52■□□□□ 0.08
XCL1-201ENST00000367818 EVX2Q03828 476 aa15.49■□□□□ 0.07
XCL1-201ENST00000367818 SPDYE2BA6NHP3 402 aa15.36■□□□□ 0.05
XCL1-201ENST00000367818 SPDYE6P0CI01 402 aa15.36■□□□□ 0.05
XCL1-201ENST00000367818 SPDYE2Q495Y8 402 aa15.36■□□□□ 0.05
XCL1-201ENST00000367818 PRKAR2AP13861 404 aaKnown RBP15.31■□□□□ 0.04
XCL1-201ENST00000367818 FBLN2P98095 1184 aa15.27■□□□□ 0.04
XCL1-201ENST00000367818 SPDYE1Q8NFV5 336 aaPredicted RBP15.25■□□□□ 0.03
XCL1-201ENST00000367818 ATXN8OSP0DMR3 200 aa15.24■□□□□ 0.03
XCL1-201ENST00000367818 C19orf67A6NJJ6 358 aa15.24■□□□□ 0.03
XCL1-201ENST00000367818 CLEC11AQ9Y240 323 aa15.24■□□□□ 0.03
XCL1-201ENST00000367818 ZBTB22O15209 634 aa15.21■□□□□ 0.02
XCL1-201ENST00000367818 GABBR2O75899 941 aa15.14■□□□□ 0.01
XCL1-201ENST00000367818 LHX8Q68G74 356 aa15.11■□□□□ 0.01
XCL1-201ENST00000367818 SSUH2Q9Y2M2 353 aa15.1■□□□□ 0.01
XCL1-201ENST00000367818 ZNF692Q9BU19 519 aaPredicted RBP15.06■□□□□ 0
XCL1-201ENST00000367818 MKRN4PQ13434 485 aaPredicted RBP15.05■□□□□ -0
XCL1-201ENST00000367818 CHADLQ6NUI6 762 aa14.99□□□□□ -0.01
XCL1-201ENST00000367818 PRR29P0C7W0 189 aa14.89□□□□□ -0.03
XCL1-201ENST00000367818 PABPN1Q86U42 306 aaKnown RBP eCLIP14.83□□□□□ -0.04
XCL1-201ENST00000367818 POTEIP0CG38 1075 aa14.81□□□□□ -0.04
XCL1-201ENST00000367818 CD44P16070 742 aaKnown RBP14.8□□□□□ -0.04
XCL1-201ENST00000367818 CLCN6P51797 869 aa14.73□□□□□ -0.05
XCL1-201ENST00000367818 FARP1Q9Y4F1 1045 aaPredicted RBP14.73□□□□□ -0.05
XCL1-201ENST00000367818 PLSCR2Q9NRY7 297 aa14.65□□□□□ -0.06
XCL1-201ENST00000367818 DCBLD2Q96PD2 775 aa14.63□□□□□ -0.07
XCL1-201ENST00000367818 ZNF579Q8NAF0 562 aaKnown RBP14.57□□□□□ -0.08
XCL1-201ENST00000367818 ZRANB1Q9UGI0 708 aa14.48□□□□□ -0.09
XCL1-201ENST00000367818 GALR2O43603 387 aaPredicted RBP14.4□□□□□ -0.1
XCL1-201ENST00000367818 OTUD5Q96G74 571 aa14.38□□□□□ -0.11
XCL1-201ENST00000367818 CREBZFQ9NS37 354 aa14.38□□□□□ -0.11
XCL1-201ENST00000367818 STAG3Q9UJ98 1225 aa14.31□□□□□ -0.12
XCL1-201ENST00000367818 POTEB2H3BUK9 544 aa14.29□□□□□ -0.12
XCL1-201ENST00000367818 PAK3O75914 559 aaPredicted RBP14.28□□□□□ -0.12
XCL1-201ENST00000367818 POTEMA6NI47 508 aa14.27□□□□□ -0.12
XCL1-201ENST00000367818 PHF12Q96QT6 1004 aa14.24□□□□□ -0.13
XCL1-201ENST00000367818 POTEGQ6S5H5 508 aa14.21□□□□□ -0.14
XCL1-201ENST00000367818 PELP1Q8IZL8 1130 aaKnown RBP14.15□□□□□ -0.14
XCL1-201ENST00000367818 NPM1P06748 294 aaKnown RBP eCLIP14.12□□□□□ -0.15
XCL1-201ENST00000367818 METRNQ9UJH8 293 aa14.09□□□□□ -0.15
XCL1-201ENST00000367818 ASTLQ6HA08 431 aaPredicted RBP14.07□□□□□ -0.16
XCL1-201ENST00000367818 PCDH10Q9P2E7 1040 aa14.07□□□□□ -0.16
XCL1-201ENST00000367818 MNX1P50219 401 aaPredicted RBP14.05□□□□□ -0.16
XCL1-201ENST00000367818 SLC39A7Q92504 469 aa14.05□□□□□ -0.16
XCL1-201ENST00000367818 SPDYE4A6NLX3 237 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms