RNA–Protein interactions for RNA: ENST00000367321.7

MTHFD1L-203, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MTHFD1L, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1L-203ENST00000367321 NISCHQ9Y2I1 1504 aa31.76■■■□□ 2.67
MTHFD1L-203ENST00000367321 SHROOM4Q9ULL8 1493 aa28.44■■■□□ 2.14
MTHFD1L-203ENST00000367321 SUPT5HO00267 1087 aaKnown RBP28.05■■■□□ 2.08
MTHFD1L-203ENST00000367321 DCAF8L2P0C7V8 631 aa27.89■■■□□ 2.06
MTHFD1L-203ENST00000367321 ZCCHC6Q5VYS8 1495 aaKnown RBP26.77■■□□□ 1.88
MTHFD1L-203ENST00000367321 CHIC1Q5VXU3 224 aa26.76■■□□□ 1.87
MTHFD1L-203ENST00000367321 PCGF6Q9BYE7 350 aa26.61■■□□□ 1.85
MTHFD1L-203ENST00000367321 MYO15BQ96JP2 1530 aa26.55■■□□□ 1.84
MTHFD1L-203ENST00000367321 LOC105371045A0A1W2PR82 267 aa26.43■■□□□ 1.82
MTHFD1L-203ENST00000367321 CCDC180Q9P1Z9 1646 aa26.36■■□□□ 1.81
MTHFD1L-203ENST00000367321 EHMT2Q96KQ7 1210 aa26.33■■□□□ 1.81
MTHFD1L-203ENST00000367321 HRCP23327 699 aa26.22■■□□□ 1.79
MTHFD1L-203ENST00000367321 PPARGC1BQ86YN6 1023 aaKnown RBP26.2■■□□□ 1.79
MTHFD1L-203ENST00000367321 FAM9AQ8IZU1 332 aaPredicted RBP26.11■■□□□ 1.77
MTHFD1L-203ENST00000367321 TRIM41Q8WV44 630 aa25.79■■□□□ 1.72
MTHFD1L-203ENST00000367321 SCRIBQ14160 1630 aa25.62■■□□□ 1.69
MTHFD1L-203ENST00000367321 TRIM26Q12899 539 aaPredicted RBP25.57■■□□□ 1.68
MTHFD1L-203ENST00000367321 DCAF1Q9Y4B6 1507 aa25.51■■□□□ 1.67
MTHFD1L-203ENST00000367321 ABCC9O60706 1549 aa25.48■■□□□ 1.67
MTHFD1L-203ENST00000367321 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
MTHFD1L-203ENST00000367321 TTBK1Q5TCY1 1321 aaPredicted RBP25.42■■□□□ 1.66
MTHFD1L-203ENST00000367321 RB1CC1Q8TDY2 1594 aa25.19■■□□□ 1.62
MTHFD1L-203ENST00000367321 CECR2Q9BXF3 1484 aa25.16■■□□□ 1.62
MTHFD1L-203ENST00000367321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.99■■□□□ 1.59
MTHFD1L-203ENST00000367321 MROH2BQ7Z745 1585 aa24.92■■□□□ 1.58
MTHFD1L-203ENST00000367321 ZEB1P37275 1124 aaPredicted RBP24.91■■□□□ 1.58
MTHFD1L-203ENST00000367321 CCER1Q8TC90 406 aaPredicted RBP24.89■■□□□ 1.57
MTHFD1L-203ENST00000367321 PABPN1Q86U42 306 aaKnown RBP eCLIP24.8■■□□□ 1.56
MTHFD1L-203ENST00000367321 RANGAP1P46060 587 aaPredicted RBP24.78■■□□□ 1.56
MTHFD1L-203ENST00000367321 WIZO95785 1651 aa24.76■■□□□ 1.55
MTHFD1L-203ENST00000367321 UBTFP17480 764 aaKnown RBP24.75■■□□□ 1.55
MTHFD1L-203ENST00000367321 NACADO15069 1562 aa24.63■■□□□ 1.53
MTHFD1L-203ENST00000367321 ABCC8Q09428 1581 aa24.53■■□□□ 1.52
MTHFD1L-203ENST00000367321 CCDC88BA6NC98 1476 aa24.45■■□□□ 1.5
MTHFD1L-203ENST00000367321 SCAF1Q9H7N4 1312 aaKnown RBP24.45■■□□□ 1.5
MTHFD1L-203ENST00000367321 SOGA1O94964 1423 aa24.41■■□□□ 1.5
MTHFD1L-203ENST00000367321 HNRNPUL2Q1KMD3 747 aaKnown RBP24.41■■□□□ 1.5
MTHFD1L-203ENST00000367321 CSRNP3Q8WYN3 585 aa24.36■■□□□ 1.49
MTHFD1L-203ENST00000367321 BAZ1AQ9NRL2 1556 aaPredicted RBP24.34■■□□□ 1.49
MTHFD1L-203ENST00000367321 DIEXFQ68CQ4 756 aaKnown RBP24.31■■□□□ 1.48
MTHFD1L-203ENST00000367321 YTHDC1Q96MU7 727 aaKnown RBP24.29■■□□□ 1.48
MTHFD1L-203ENST00000367321 CEP162Q5TB80 1403 aa24.28■■□□□ 1.48
MTHFD1L-203ENST00000367321 RUSC2Q8N2Y8 1516 aa24.28■■□□□ 1.48
MTHFD1L-203ENST00000367321 NEUROD1Q13562 356 aa24.2■■□□□ 1.46
MTHFD1L-203ENST00000367321 APLP2Q06481 763 aa24.18■■□□□ 1.46
MTHFD1L-203ENST00000367321 TOP2AP11388 1531 aaKnown RBP24.1■■□□□ 1.45
MTHFD1L-203ENST00000367321 SMARCA4P51532 1647 aa24.09■■□□□ 1.45
MTHFD1L-203ENST00000367321 GTF3C3Q9Y5Q9 886 aa24.06■■□□□ 1.44
MTHFD1L-203ENST00000367321 ACIN1Q9UKV3 1341 aaKnown RBP24.06■■□□□ 1.44
MTHFD1L-203ENST00000367321 SMARCA2P51531 1590 aa24.05■■□□□ 1.44
MTHFD1L-203ENST00000367321 TNIKQ9UKE5 1360 aa24.03■■□□□ 1.44
MTHFD1L-203ENST00000367321 CENPBP07199 599 aaPredicted RBP24.01■■□□□ 1.43
MTHFD1L-203ENST00000367321 WRNQ14191 1432 aaPredicted RBP eCLIP24■■□□□ 1.43
MTHFD1L-203ENST00000367321 EIF4G1Q04637 1599 aaKnown RBP23.93■■□□□ 1.42
MTHFD1L-203ENST00000367321 ZNF316A6NFI3 1004 aaPredicted RBP23.92■■□□□ 1.42
MTHFD1L-203ENST00000367321 ITGAEP38570 1179 aa23.92■■□□□ 1.42
MTHFD1L-203ENST00000367321 GOLGA3Q08378 1498 aa23.88■■□□□ 1.41
MTHFD1L-203ENST00000367321 CLIP1P30622 1438 aa23.85■■□□□ 1.41
MTHFD1L-203ENST00000367321 MIER1Q8N108 512 aa23.79■■□□□ 1.4
MTHFD1L-203ENST00000367321 UNC13AQ9UPW8 1703 aa23.78■■□□□ 1.4
MTHFD1L-203ENST00000367321 EEA1Q15075 1411 aa23.78■■□□□ 1.4
MTHFD1L-203ENST00000367321 PELP1Q8IZL8 1130 aaKnown RBP23.71■■□□□ 1.39
MTHFD1L-203ENST00000367321 BAZ1BQ9UIG0 1483 aaKnown RBP23.71■■□□□ 1.39
MTHFD1L-203ENST00000367321 RAPGEF2Q9Y4G8 1499 aa23.7■■□□□ 1.38
MTHFD1L-203ENST00000367321 ATP1B4Q9UN42 357 aaPredicted RBP23.7■■□□□ 1.38
MTHFD1L-203ENST00000367321 CEP164Q9UPV0 1460 aa23.69■■□□□ 1.38
MTHFD1L-203ENST00000367321 SYNJ1O43426 1573 aa23.67■■□□□ 1.38
MTHFD1L-203ENST00000367321 BICRAQ9NZM4 1560 aa23.62■■□□□ 1.37
MTHFD1L-203ENST00000367321 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
MTHFD1L-203ENST00000367321 KANK4Q5T7N3 995 aaPredicted RBP23.61■■□□□ 1.37
MTHFD1L-203ENST00000367321 VPS8Q8N3P4 1428 aa23.56■■□□□ 1.36
MTHFD1L-203ENST00000367321 P3H3Q8IVL6 736 aa23.52■■□□□ 1.36
MTHFD1L-203ENST00000367321 FAM50AQ14320 339 aaKnown RBP23.37■■□□□ 1.33
MTHFD1L-203ENST00000367321 KIF21BO75037 1637 aa23.36■■□□□ 1.33
MTHFD1L-203ENST00000367321 HIRIP3Q9BW71 556 aaPredicted RBP23.27■■□□□ 1.32
MTHFD1L-203ENST00000367321 DHX57Q6P158 1386 aaKnown RBP23.23■■□□□ 1.31
MTHFD1L-203ENST00000367321 KIF27Q86VH2 1401 aa23.22■■□□□ 1.31
MTHFD1L-203ENST00000367321 PEG3Q9GZU2 1588 aa23.22■■□□□ 1.31
MTHFD1L-203ENST00000367321 ARAP1Q96P48 1450 aa23.22■■□□□ 1.31
MTHFD1L-203ENST00000367321 KCNH8Q96L42 1107 aa23.16■■□□□ 1.3
MTHFD1L-203ENST00000367321 SIN3AQ96ST3 1273 aa23.16■■□□□ 1.3
MTHFD1L-203ENST00000367321 TOP2BQ02880 1626 aa23.14■■□□□ 1.29
MTHFD1L-203ENST00000367321 CCNB3Q8WWL7 1395 aa23.12■■□□□ 1.29
MTHFD1L-203ENST00000367321 BCANQ96GW7 911 aa23.12■■□□□ 1.29
MTHFD1L-203ENST00000367321 CUX2O14529 1486 aa23.12■■□□□ 1.29
MTHFD1L-203ENST00000367321 CUX1P39880 1505 aa23.11■■□□□ 1.29
MTHFD1L-203ENST00000367321 PRXQ9BXM0 1461 aa23.11■■□□□ 1.29
MTHFD1L-203ENST00000367321 DDX10Q13206 875 aaKnown RBP23.1■■□□□ 1.29
MTHFD1L-203ENST00000367321 RAB3GAP2Q9H2M9 1393 aa23.02■■□□□ 1.28
MTHFD1L-203ENST00000367321 ARID3CA6NKF2 412 aa23.01■■□□□ 1.27
MTHFD1L-203ENST00000367321 ARHGAP35Q9NRY4 1499 aa23■■□□□ 1.27
MTHFD1L-203ENST00000367321 CARMIL1Q5VZK9 1371 aa23■■□□□ 1.27
MTHFD1L-203ENST00000367321 IGF1RP08069 1367 aa22.97■■□□□ 1.27
MTHFD1L-203ENST00000367321 NCAPD3P42695 1498 aa22.95■■□□□ 1.26
MTHFD1L-203ENST00000367321 CLSPNQ9HAW4 1339 aa22.94■■□□□ 1.26
MTHFD1L-203ENST00000367321 SUPT16HQ9Y5B9 1047 aaKnown RBP22.93■■□□□ 1.26
MTHFD1L-203ENST00000367321 ERICH3Q5RHP9 1530 aa22.91■■□□□ 1.26
MTHFD1L-203ENST00000367321 CFTRP13569 1480 aa22.89■■□□□ 1.25
MTHFD1L-203ENST00000367321 TRIM52Q96A61 297 aa22.89■■□□□ 1.25
MTHFD1L-203ENST00000367321 PHLDB1Q86UU1 1377 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms