RNA–Protein interactions for RNA: ENST00000365369.1

RNU6-396P-201, Transcript of RNA, U6 small nuclear 396, pseudogene, humanhuman

BASIC

Gene RNU6-396P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-396P-201ENST00000365369 AEBP2Q6ZN18 517 aaPredicted RBP7.11□□□□□ -1.27
RNU6-396P-201ENST00000365369 CHIC1Q5VXU3 224 aa6.86□□□□□ -1.31
RNU6-396P-201ENST00000365369 PHF23Q9BUL5 403 aaPredicted RBP6.07□□□□□ -1.44
RNU6-396P-201ENST00000365369 SENP3Q9H4L4 574 aaPredicted RBP5.98□□□□□ -1.45
RNU6-396P-201ENST00000365369 FOXD1Q16676 465 aa5.6□□□□□ -1.51
RNU6-396P-201ENST00000365369 PLPPR3Q6T4P5 718 aa5.52□□□□□ -1.53
RNU6-396P-201ENST00000365369 PPP6R1Q9UPN7 881 aa5.38□□□□□ -1.55
RNU6-396P-201ENST00000365369 ADRA2BP18089 450 aa5.34□□□□□ -1.55
RNU6-396P-201ENST00000365369 PIAS4Q8N2W9 510 aaPredicted RBP5.21□□□□□ -1.58
RNU6-396P-201ENST00000365369 MSH5O43196 834 aa5.13□□□□□ -1.59
RNU6-396P-201ENST00000365369 MAPK8IP2Q13387 824 aaPredicted RBP4.87□□□□□ -1.63
RNU6-396P-201ENST00000365369 PPP4R3CPQ6ZMV5 832 aa4.87□□□□□ -1.63
RNU6-396P-201ENST00000365369 SCAF1Q9H7N4 1312 aaKnown RBP4.82□□□□□ -1.64
RNU6-396P-201ENST00000365369 POTEDQ86YR6 584 aa4.8□□□□□ -1.64
RNU6-396P-201ENST00000365369 DMRT2Q9Y5R5 561 aa4.79□□□□□ -1.64
RNU6-396P-201ENST00000365369 CNKSR2Q8WXI2 1034 aa4.74□□□□□ -1.65
RNU6-396P-201ENST00000365369 KCNA4P22459 653 aa4.71□□□□□ -1.66
RNU6-396P-201ENST00000365369 NCBP3Q53F19 620 aaKnown RBP4.69□□□□□ -1.66
RNU6-396P-201ENST00000365369 NPM3O75607 178 aaKnown RBP4.68□□□□□ -1.66
RNU6-396P-201ENST00000365369 HOXD11P31277 338 aaPredicted RBP4.68□□□□□ -1.66
RNU6-396P-201ENST00000365369 RNF216Q9NWF9 866 aaPredicted RBP4.67□□□□□ -1.66
RNU6-396P-201ENST00000365369 DNAJC5BQ9UF47 199 aa4.58□□□□□ -1.68
RNU6-396P-201ENST00000365369 DCAF8L1A6NGE4 600 aa4.52□□□□□ -1.69
RNU6-396P-201ENST00000365369 SLC4A2P04920 1241 aa4.45□□□□□ -1.7
RNU6-396P-201ENST00000365369 SLC4A1APQ9BWU0 796 aaKnown RBP4.44□□□□□ -1.7
RNU6-396P-201ENST00000365369 RNF39Q9H2S5 420 aa4.43□□□□□ -1.7
RNU6-396P-201ENST00000365369 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.4□□□□□ -1.71
RNU6-396P-201ENST00000365369 U3KPZ7 1027 aaPredicted RBP4.37□□□□□ -1.71
RNU6-396P-201ENST00000365369 ZBTB22O15209 634 aa4.36□□□□□ -1.71
RNU6-396P-201ENST00000365369 C1QBPQ07021 282 aaKnown RBP4.35□□□□□ -1.71
RNU6-396P-201ENST00000365369 FOXD4L1Q9NU39 408 aa4.33□□□□□ -1.72
RNU6-396P-201ENST00000365369 CACNB1Q02641 598 aaPredicted RBP4.3□□□□□ -1.72
RNU6-396P-201ENST00000365369 CSRNP3Q8WYN3 585 aa4.29□□□□□ -1.72
RNU6-396P-201ENST00000365369 MYCNP04198 464 aaPredicted RBP4.28□□□□□ -1.72
RNU6-396P-201ENST00000365369 SPINK5Q9NQ38 1064 aaPredicted RBP4.27□□□□□ -1.73
RNU6-396P-201ENST00000365369 EHMT2Q96KQ7 1210 aa4.25□□□□□ -1.73
RNU6-396P-201ENST00000365369 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.24□□□□□ -1.73
RNU6-396P-201ENST00000365369 HNRNPUL2Q1KMD3 747 aaKnown RBP4.24□□□□□ -1.73
RNU6-396P-201ENST00000365369 SAMD1Q6SPF0 538 aaPredicted RBP4.24□□□□□ -1.73
RNU6-396P-201ENST00000365369 ATF5Q9Y2D1 282 aaPredicted RBP4.23□□□□□ -1.73
RNU6-396P-201ENST00000365369 CAPN15O75808 1086 aa4.21□□□□□ -1.74
RNU6-396P-201ENST00000365369 DSG3P32926 999 aa4.2□□□□□ -1.74
RNU6-396P-201ENST00000365369 ATXN8OSP0DMR3 200 aa4.19□□□□□ -1.74
RNU6-396P-201ENST00000365369 APLP2Q06481 763 aa4.19□□□□□ -1.74
RNU6-396P-201ENST00000365369 TRHP20396 242 aaPredicted RBP4.18□□□□□ -1.74
RNU6-396P-201ENST00000365369 ZNF219Q9P2Y4 722 aaPredicted RBP4.17□□□□□ -1.74
RNU6-396P-201ENST00000365369 ABCB7O75027 752 aa4.13□□□□□ -1.75
RNU6-396P-201ENST00000365369 POLA2Q14181 598 aa4.13□□□□□ -1.75
RNU6-396P-201ENST00000365369 MKRN4PQ13434 485 aaPredicted RBP4.04□□□□□ -1.76
RNU6-396P-201ENST00000365369 ZBTB12Q9Y330 459 aaPredicted RBP4.01□□□□□ -1.77
RNU6-396P-201ENST00000365369 OSCARQ8IYS5 282 aa3.98□□□□□ -1.77
RNU6-396P-201ENST00000365369 FBLN2P98095 1184 aa3.97□□□□□ -1.77
RNU6-396P-201ENST00000365369 RBM42Q9BTD8 480 aaKnown RBP3.94□□□□□ -1.78
RNU6-396P-201ENST00000365369 SPDYE2BA6NHP3 402 aa3.93□□□□□ -1.78
RNU6-396P-201ENST00000365369 SPDYE6P0CI01 402 aa3.93□□□□□ -1.78
RNU6-396P-201ENST00000365369 SPDYE2Q495Y8 402 aa3.93□□□□□ -1.78
RNU6-396P-201ENST00000365369 AKT1S1Q96B36 256 aa3.92□□□□□ -1.78
RNU6-396P-201ENST00000365369 SSUH2Q9Y2M2 353 aa3.92□□□□□ -1.78
RNU6-396P-201ENST00000365369 ZNF692Q9BU19 519 aaPredicted RBP3.9□□□□□ -1.79
RNU6-396P-201ENST00000365369 REM2Q8IYK8 340 aaPredicted RBP3.89□□□□□ -1.79
RNU6-396P-201ENST00000365369 SPDYE4A6NLX3 237 aa3.88□□□□□ -1.79
RNU6-396P-201ENST00000365369 PROM2Q8N271 834 aa3.86□□□□□ -1.79
RNU6-396P-201ENST00000365369 PABPN1Q86U42 306 aaKnown RBP eCLIP3.85□□□□□ -1.79
RNU6-396P-201ENST00000365369 PITPNM1O00562 1244 aa3.84□□□□□ -1.79
RNU6-396P-201ENST00000365369 FKBP8Q14318 412 aa3.83□□□□□ -1.8
RNU6-396P-201ENST00000365369 CHRDL2Q6WN34 429 aa3.83□□□□□ -1.8
RNU6-396P-201ENST00000365369 SPDYE1Q8NFV5 336 aaPredicted RBP3.81□□□□□ -1.8
RNU6-396P-201ENST00000365369 FXR2P51116 673 aaKnown RBP eCLIP3.8□□□□□ -1.8
RNU6-396P-201ENST00000365369 CLEC11AQ9Y240 323 aa3.79□□□□□ -1.8
RNU6-396P-201ENST00000365369 POTEHQ6S545 545 aa3.78□□□□□ -1.8
RNU6-396P-201ENST00000365369 PIP4P2Q8N4L2 257 aa3.78□□□□□ -1.8
RNU6-396P-201ENST00000365369 PRR29P0C7W0 189 aa3.76□□□□□ -1.81
RNU6-396P-201ENST00000365369 STAG3Q9UJ98 1225 aa3.76□□□□□ -1.81
RNU6-396P-201ENST00000365369 CREBZFQ9NS37 354 aa3.74□□□□□ -1.81
RNU6-396P-201ENST00000365369 PRKAR2AP13861 404 aaKnown RBP3.73□□□□□ -1.81
RNU6-396P-201ENST00000365369 CHADLQ6NUI6 762 aa3.73□□□□□ -1.81
RNU6-396P-201ENST00000365369 MNX1P50219 401 aaPredicted RBP3.72□□□□□ -1.81
RNU6-396P-201ENST00000365369 FARP1Q9Y4F1 1045 aaPredicted RBP3.7□□□□□ -1.82
RNU6-396P-201ENST00000365369 FBXO3Q9UK99 471 aa3.69□□□□□ -1.82
RNU6-396P-201ENST00000365369 EVX2Q03828 476 aa3.68□□□□□ -1.82
RNU6-396P-201ENST00000365369 C19orf67A6NJJ6 358 aa3.67□□□□□ -1.82
RNU6-396P-201ENST00000365369 MIER1Q8N108 512 aa3.67□□□□□ -1.82
RNU6-396P-201ENST00000365369 VASPP50552 380 aaPredicted RBP3.66□□□□□ -1.82
RNU6-396P-201ENST00000365369 HAX1O00165 279 aa3.64□□□□□ -1.83
RNU6-396P-201ENST00000365369 IFNLR1Q8IU57 520 aaPredicted RBP3.64□□□□□ -1.83
RNU6-396P-201ENST00000365369 PLCD3Q8N3E9 789 aa3.64□□□□□ -1.83
RNU6-396P-201ENST00000365369 NUBP1P53384 320 aa3.63□□□□□ -1.83
RNU6-396P-201ENST00000365369 NPM1P06748 294 aaKnown RBP eCLIP3.62□□□□□ -1.83
RNU6-396P-201ENST00000365369 PLEKHG5O94827 1062 aa3.61□□□□□ -1.83
RNU6-396P-201ENST00000365369 CD44P16070 742 aaKnown RBP3.61□□□□□ -1.83
RNU6-396P-201ENST00000365369 RASEFQ8IZ41 740 aa3.61□□□□□ -1.83
RNU6-396P-201ENST00000365369 SP7Q8TDD2 431 aaPredicted RBP3.6□□□□□ -1.83
RNU6-396P-201ENST00000365369 ZBTB47Q9UFB7 747 aaPredicted RBP3.6□□□□□ -1.83
RNU6-396P-201ENST00000365369 ZNF579Q8NAF0 562 aaKnown RBP3.59□□□□□ -1.83
RNU6-396P-201ENST00000365369 CCDC61Q9Y6R9 512 aa3.59□□□□□ -1.83
RNU6-396P-201ENST00000365369 TSPYL2Q9H2G4 693 aaPredicted RBP3.58□□□□□ -1.84
RNU6-396P-201ENST00000365369 ZRANB1Q9UGI0 708 aa3.58□□□□□ -1.84
RNU6-396P-201ENST00000365369 GABBR2O75899 941 aa3.57□□□□□ -1.84
RNU6-396P-201ENST00000365369 KLHL34Q8N239 644 aa3.57□□□□□ -1.84
RNU6-396P-201ENST00000365369 SPOCK2Q92563 424 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms