RNA–Protein interactions for RNA: ENST00000365287.1

RNU4-11P-201, Transcript of RNA, U4 small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4-11P, Length 132 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-11P-201ENST00000365287 AEBP2Q6ZN18 517 aaPredicted RBP15.57■□□□□ 0.08
RNU4-11P-201ENST00000365287 CHIC1Q5VXU3 224 aa14.62□□□□□ -0.07
RNU4-11P-201ENST00000365287 SENP3Q9H4L4 574 aaPredicted RBP13.4□□□□□ -0.26
RNU4-11P-201ENST00000365287 PHF23Q9BUL5 403 aaPredicted RBP13.13□□□□□ -0.31
RNU4-11P-201ENST00000365287 FOXD1Q16676 465 aa12.47□□□□□ -0.41
RNU4-11P-201ENST00000365287 POTEDQ86YR6 584 aa12.03□□□□□ -0.48
RNU4-11P-201ENST00000365287 MSH5O43196 834 aa11.85□□□□□ -0.51
RNU4-11P-201ENST00000365287 PIAS4Q8N2W9 510 aaPredicted RBP11.6□□□□□ -0.55
RNU4-11P-201ENST00000365287 PLPPR3Q6T4P5 718 aa11.5□□□□□ -0.57
RNU4-11P-201ENST00000365287 PPP6R1Q9UPN7 881 aa11.39□□□□□ -0.59
RNU4-11P-201ENST00000365287 ADRA2BP18089 450 aa11.34□□□□□ -0.59
RNU4-11P-201ENST00000365287 DMRT2Q9Y5R5 561 aa10.56□□□□□ -0.72
RNU4-11P-201ENST00000365287 MAPK8IP2Q13387 824 aaPredicted RBP10.48□□□□□ -0.73
RNU4-11P-201ENST00000365287 SCAF1Q9H7N4 1312 aaKnown RBP10.47□□□□□ -0.73
RNU4-11P-201ENST00000365287 CACNB1Q02641 598 aaPredicted RBP10.32□□□□□ -0.76
RNU4-11P-201ENST00000365287 DCAF8L1A6NGE4 600 aa10.1□□□□□ -0.79
RNU4-11P-201ENST00000365287 HOXD11P31277 338 aaPredicted RBP10.06□□□□□ -0.8
RNU4-11P-201ENST00000365287 RNF39Q9H2S5 420 aa10.06□□□□□ -0.8
RNU4-11P-201ENST00000365287 PPP4R3CPQ6ZMV5 832 aa10□□□□□ -0.81
RNU4-11P-201ENST00000365287 C1QBPQ07021 282 aaKnown RBP9.92□□□□□ -0.82
RNU4-11P-201ENST00000365287 CNKSR2Q8WXI2 1034 aa9.92□□□□□ -0.82
RNU4-11P-201ENST00000365287 RNF216Q9NWF9 866 aaPredicted RBP9.91□□□□□ -0.82
RNU4-11P-201ENST00000365287 DNAJC5BQ9UF47 199 aa9.84□□□□□ -0.83
RNU4-11P-201ENST00000365287 NCBP3Q53F19 620 aaKnown RBP9.58□□□□□ -0.88
RNU4-11P-201ENST00000365287 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.56□□□□□ -0.88
RNU4-11P-201ENST00000365287 NPM3O75607 178 aaKnown RBP9.38□□□□□ -0.91
RNU4-11P-201ENST00000365287 POTEHQ6S545 545 aa9.38□□□□□ -0.91
RNU4-11P-201ENST00000365287 U3KPZ7 1027 aaPredicted RBP9.33□□□□□ -0.92
RNU4-11P-201ENST00000365287 DSG3P32926 999 aa9.3□□□□□ -0.92
RNU4-11P-201ENST00000365287 CAPN15O75808 1086 aa9.27□□□□□ -0.93
RNU4-11P-201ENST00000365287 SPINK5Q9NQ38 1064 aaPredicted RBP9.25□□□□□ -0.93
RNU4-11P-201ENST00000365287 APLP2Q06481 763 aa9.13□□□□□ -0.95
RNU4-11P-201ENST00000365287 ZNF219Q9P2Y4 722 aaPredicted RBP9.09□□□□□ -0.95
RNU4-11P-201ENST00000365287 TRHP20396 242 aaPredicted RBP9.04□□□□□ -0.96
RNU4-11P-201ENST00000365287 SLC4A2P04920 1241 aa9.03□□□□□ -0.96
RNU4-11P-201ENST00000365287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.02□□□□□ -0.97
RNU4-11P-201ENST00000365287 HNRNPUL2Q1KMD3 747 aaKnown RBP9.02□□□□□ -0.97
RNU4-11P-201ENST00000365287 ABCB7O75027 752 aa9.01□□□□□ -0.97
RNU4-11P-201ENST00000365287 SAMD1Q6SPF0 538 aaPredicted RBP8.94□□□□□ -0.98
RNU4-11P-201ENST00000365287 RBM42Q9BTD8 480 aaKnown RBP8.94□□□□□ -0.98
RNU4-11P-201ENST00000365287 KCNA4P22459 653 aa8.91□□□□□ -0.98
RNU4-11P-201ENST00000365287 CHRDL2Q6WN34 429 aa8.82□□□□□ -1
RNU4-11P-201ENST00000365287 MYCNP04198 464 aaPredicted RBP8.73□□□□□ -1.01
RNU4-11P-201ENST00000365287 POLA2Q14181 598 aa8.73□□□□□ -1.01
RNU4-11P-201ENST00000365287 SP7Q8TDD2 431 aaPredicted RBP8.66□□□□□ -1.02
RNU4-11P-201ENST00000365287 AKT1S1Q96B36 256 aa8.64□□□□□ -1.03
RNU4-11P-201ENST00000365287 ZBTB12Q9Y330 459 aaPredicted RBP8.62□□□□□ -1.03
RNU4-11P-201ENST00000365287 REM2Q8IYK8 340 aaPredicted RBP8.54□□□□□ -1.04
RNU4-11P-201ENST00000365287 PIP4P2Q8N4L2 257 aa8.54□□□□□ -1.04
RNU4-11P-201ENST00000365287 OSCARQ8IYS5 282 aa8.48□□□□□ -1.05
RNU4-11P-201ENST00000365287 ATF5Q9Y2D1 282 aaPredicted RBP8.47□□□□□ -1.05
RNU4-11P-201ENST00000365287 HAX1O00165 279 aa8.46□□□□□ -1.06
RNU4-11P-201ENST00000365287 FOXD4L1Q9NU39 408 aa8.46□□□□□ -1.06
RNU4-11P-201ENST00000365287 PITPNM1O00562 1244 aa8.45□□□□□ -1.06
RNU4-11P-201ENST00000365287 FXR2P51116 673 aaKnown RBP eCLIP8.45□□□□□ -1.06
RNU4-11P-201ENST00000365287 SLC4A1APQ9BWU0 796 aaKnown RBP8.38□□□□□ -1.07
RNU4-11P-201ENST00000365287 SPDYE2BA6NHP3 402 aa8.3□□□□□ -1.08
RNU4-11P-201ENST00000365287 SPDYE6P0CI01 402 aa8.3□□□□□ -1.08
RNU4-11P-201ENST00000365287 SPDYE2Q495Y8 402 aa8.3□□□□□ -1.08
RNU4-11P-201ENST00000365287 EVX2Q03828 476 aa8.28□□□□□ -1.08
RNU4-11P-201ENST00000365287 ATXN8OSP0DMR3 200 aa8.27□□□□□ -1.09
RNU4-11P-201ENST00000365287 FBLN2P98095 1184 aa8.24□□□□□ -1.09
RNU4-11P-201ENST00000365287 PRKAR2AP13861 404 aaKnown RBP8.22□□□□□ -1.09
RNU4-11P-201ENST00000365287 SPDYE1Q8NFV5 336 aaPredicted RBP8.22□□□□□ -1.09
RNU4-11P-201ENST00000365287 C19orf67A6NJJ6 358 aa8.19□□□□□ -1.1
RNU4-11P-201ENST00000365287 ZBTB22O15209 634 aa8.17□□□□□ -1.1
RNU4-11P-201ENST00000365287 CLEC11AQ9Y240 323 aa8.17□□□□□ -1.1
RNU4-11P-201ENST00000365287 SSUH2Q9Y2M2 353 aa8.14□□□□□ -1.11
RNU4-11P-201ENST00000365287 GABBR2O75899 941 aa8.13□□□□□ -1.11
RNU4-11P-201ENST00000365287 ZNF692Q9BU19 519 aaPredicted RBP8.11□□□□□ -1.11
RNU4-11P-201ENST00000365287 LHX8Q68G74 356 aa8.1□□□□□ -1.11
RNU4-11P-201ENST00000365287 MKRN4PQ13434 485 aaPredicted RBP8.09□□□□□ -1.11
RNU4-11P-201ENST00000365287 CHADLQ6NUI6 762 aa8.03□□□□□ -1.12
RNU4-11P-201ENST00000365287 PRR29P0C7W0 189 aa8.01□□□□□ -1.13
RNU4-11P-201ENST00000365287 CLCN6P51797 869 aa7.98□□□□□ -1.13
RNU4-11P-201ENST00000365287 PABPN1Q86U42 306 aaKnown RBP eCLIP7.97□□□□□ -1.13
RNU4-11P-201ENST00000365287 CD44P16070 742 aaKnown RBP7.95□□□□□ -1.14
RNU4-11P-201ENST00000365287 POTEIP0CG38 1075 aa7.93□□□□□ -1.14
RNU4-11P-201ENST00000365287 FARP1Q9Y4F1 1045 aaPredicted RBP7.92□□□□□ -1.14
RNU4-11P-201ENST00000365287 DCBLD2Q96PD2 775 aa7.86□□□□□ -1.15
RNU4-11P-201ENST00000365287 ZNF579Q8NAF0 562 aaKnown RBP7.84□□□□□ -1.15
RNU4-11P-201ENST00000365287 PLSCR2Q9NRY7 297 aa7.82□□□□□ -1.16
RNU4-11P-201ENST00000365287 ZRANB1Q9UGI0 708 aa7.78□□□□□ -1.16
RNU4-11P-201ENST00000365287 STAG3Q9UJ98 1225 aa7.75□□□□□ -1.17
RNU4-11P-201ENST00000365287 CREBZFQ9NS37 354 aa7.73□□□□□ -1.17
RNU4-11P-201ENST00000365287 GALR2O43603 387 aaPredicted RBP7.71□□□□□ -1.18
RNU4-11P-201ENST00000365287 OTUD5Q96G74 571 aa7.71□□□□□ -1.18
RNU4-11P-201ENST00000365287 PAK3O75914 559 aaPredicted RBP7.7□□□□□ -1.18
RNU4-11P-201ENST00000365287 POTEMA6NI47 508 aa7.64□□□□□ -1.19
RNU4-11P-201ENST00000365287 POTEB2H3BUK9 544 aa7.64□□□□□ -1.19
RNU4-11P-201ENST00000365287 PHF12Q96QT6 1004 aa7.63□□□□□ -1.19
RNU4-11P-201ENST00000365287 NPM1P06748 294 aaKnown RBP eCLIP7.62□□□□□ -1.19
RNU4-11P-201ENST00000365287 POTEGQ6S5H5 508 aa7.62□□□□□ -1.19
RNU4-11P-201ENST00000365287 PCDH10Q9P2E7 1040 aa7.6□□□□□ -1.19
RNU4-11P-201ENST00000365287 ASTLQ6HA08 431 aaPredicted RBP7.58□□□□□ -1.2
RNU4-11P-201ENST00000365287 PELP1Q8IZL8 1130 aaKnown RBP7.58□□□□□ -1.2
RNU4-11P-201ENST00000365287 SPDYE4A6NLX3 237 aa7.57□□□□□ -1.2
RNU4-11P-201ENST00000365287 MNX1P50219 401 aaPredicted RBP7.57□□□□□ -1.2
RNU4-11P-201ENST00000365287 METRNQ9UJH8 293 aa7.57□□□□□ -1.2
RNU4-11P-201ENST00000365287 C7P10643 843 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms