RNA–Protein interactions for RNA: ENST00000365280.1

RNU6-407P-201, Transcript of RNA, U6 small nuclear 407, pseudogene, humanhuman

BASIC

Gene RNU6-407P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-407P-201ENST00000365280 AEBP2Q6ZN18 517 aaPredicted RBP14.32□□□□□ -0.12
RNU6-407P-201ENST00000365280 CHIC1Q5VXU3 224 aa13.47□□□□□ -0.25
RNU6-407P-201ENST00000365280 SENP3Q9H4L4 574 aaPredicted RBP12.33□□□□□ -0.44
RNU6-407P-201ENST00000365280 PHF23Q9BUL5 403 aaPredicted RBP12.09□□□□□ -0.47
RNU6-407P-201ENST00000365280 FOXD1Q16676 465 aa11.45□□□□□ -0.58
RNU6-407P-201ENST00000365280 MSH5O43196 834 aa10.86□□□□□ -0.67
RNU6-407P-201ENST00000365280 POTEDQ86YR6 584 aa10.85□□□□□ -0.67
RNU6-407P-201ENST00000365280 PLPPR3Q6T4P5 718 aa10.71□□□□□ -0.69
RNU6-407P-201ENST00000365280 PIAS4Q8N2W9 510 aaPredicted RBP10.68□□□□□ -0.7
RNU6-407P-201ENST00000365280 PPP6R1Q9UPN7 881 aa10.53□□□□□ -0.72
RNU6-407P-201ENST00000365280 ADRA2BP18089 450 aa10.49□□□□□ -0.73
RNU6-407P-201ENST00000365280 DMRT2Q9Y5R5 561 aa9.73□□□□□ -0.85
RNU6-407P-201ENST00000365280 SCAF1Q9H7N4 1312 aaKnown RBP9.7□□□□□ -0.86
RNU6-407P-201ENST00000365280 MAPK8IP2Q13387 824 aaPredicted RBP9.68□□□□□ -0.86
RNU6-407P-201ENST00000365280 CACNB1Q02641 598 aaPredicted RBP9.39□□□□□ -0.91
RNU6-407P-201ENST00000365280 DCAF8L1A6NGE4 600 aa9.32□□□□□ -0.92
RNU6-407P-201ENST00000365280 PPP4R3CPQ6ZMV5 832 aa9.32□□□□□ -0.92
RNU6-407P-201ENST00000365280 HOXD11P31277 338 aaPredicted RBP9.3□□□□□ -0.92
RNU6-407P-201ENST00000365280 CNKSR2Q8WXI2 1034 aa9.22□□□□□ -0.93
RNU6-407P-201ENST00000365280 RNF39Q9H2S5 420 aa9.21□□□□□ -0.94
RNU6-407P-201ENST00000365280 RNF216Q9NWF9 866 aaPredicted RBP9.19□□□□□ -0.94
RNU6-407P-201ENST00000365280 C1QBPQ07021 282 aaKnown RBP9.1□□□□□ -0.95
RNU6-407P-201ENST00000365280 DNAJC5BQ9UF47 199 aa9.07□□□□□ -0.96
RNU6-407P-201ENST00000365280 NCBP3Q53F19 620 aaKnown RBP8.97□□□□□ -0.97
RNU6-407P-201ENST00000365280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.86□□□□□ -0.99
RNU6-407P-201ENST00000365280 NPM3O75607 178 aaKnown RBP8.78□□□□□ -1
RNU6-407P-201ENST00000365280 U3KPZ7 1027 aaPredicted RBP8.63□□□□□ -1.03
RNU6-407P-201ENST00000365280 CAPN15O75808 1086 aa8.57□□□□□ -1.04
RNU6-407P-201ENST00000365280 DSG3P32926 999 aa8.55□□□□□ -1.04
RNU6-407P-201ENST00000365280 SPINK5Q9NQ38 1064 aaPredicted RBP8.54□□□□□ -1.04
RNU6-407P-201ENST00000365280 POTEHQ6S545 545 aa8.48□□□□□ -1.05
RNU6-407P-201ENST00000365280 APLP2Q06481 763 aa8.47□□□□□ -1.05
RNU6-407P-201ENST00000365280 KCNA4P22459 653 aa8.43□□□□□ -1.06
RNU6-407P-201ENST00000365280 SLC4A2P04920 1241 aa8.41□□□□□ -1.06
RNU6-407P-201ENST00000365280 ZNF219Q9P2Y4 722 aaPredicted RBP8.41□□□□□ -1.06
RNU6-407P-201ENST00000365280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.4□□□□□ -1.06
RNU6-407P-201ENST00000365280 HNRNPUL2Q1KMD3 747 aaKnown RBP8.4□□□□□ -1.06
RNU6-407P-201ENST00000365280 TRHP20396 242 aaPredicted RBP8.37□□□□□ -1.07
RNU6-407P-201ENST00000365280 SAMD1Q6SPF0 538 aaPredicted RBP8.33□□□□□ -1.08
RNU6-407P-201ENST00000365280 ABCB7O75027 752 aa8.32□□□□□ -1.08
RNU6-407P-201ENST00000365280 RBM42Q9BTD8 480 aaKnown RBP8.23□□□□□ -1.09
RNU6-407P-201ENST00000365280 MYCNP04198 464 aaPredicted RBP8.17□□□□□ -1.1
RNU6-407P-201ENST00000365280 POLA2Q14181 598 aa8.11□□□□□ -1.11
RNU6-407P-201ENST00000365280 CHRDL2Q6WN34 429 aa8.08□□□□□ -1.12
RNU6-407P-201ENST00000365280 ZBTB12Q9Y330 459 aaPredicted RBP8.01□□□□□ -1.13
RNU6-407P-201ENST00000365280 AKT1S1Q96B36 256 aa7.98□□□□□ -1.13
RNU6-407P-201ENST00000365280 FOXD4L1Q9NU39 408 aa7.97□□□□□ -1.13
RNU6-407P-201ENST00000365280 SLC4A1APQ9BWU0 796 aaKnown RBP7.95□□□□□ -1.14
RNU6-407P-201ENST00000365280 ATF5Q9Y2D1 282 aaPredicted RBP7.91□□□□□ -1.14
RNU6-407P-201ENST00000365280 REM2Q8IYK8 340 aaPredicted RBP7.87□□□□□ -1.15
RNU6-407P-201ENST00000365280 SP7Q8TDD2 431 aaPredicted RBP7.87□□□□□ -1.15
RNU6-407P-201ENST00000365280 OSCARQ8IYS5 282 aa7.86□□□□□ -1.15
RNU6-407P-201ENST00000365280 PIP4P2Q8N4L2 257 aa7.83□□□□□ -1.16
RNU6-407P-201ENST00000365280 PITPNM1O00562 1244 aa7.79□□□□□ -1.16
RNU6-407P-201ENST00000365280 ATXN8OSP0DMR3 200 aa7.77□□□□□ -1.17
RNU6-407P-201ENST00000365280 FXR2P51116 673 aaKnown RBP eCLIP7.76□□□□□ -1.17
RNU6-407P-201ENST00000365280 HAX1O00165 279 aa7.74□□□□□ -1.17
RNU6-407P-201ENST00000365280 ZBTB22O15209 634 aa7.73□□□□□ -1.17
RNU6-407P-201ENST00000365280 SPDYE2BA6NHP3 402 aa7.71□□□□□ -1.18
RNU6-407P-201ENST00000365280 SPDYE6P0CI01 402 aa7.71□□□□□ -1.18
RNU6-407P-201ENST00000365280 FBLN2P98095 1184 aa7.71□□□□□ -1.18
RNU6-407P-201ENST00000365280 SPDYE2Q495Y8 402 aa7.71□□□□□ -1.18
RNU6-407P-201ENST00000365280 SPDYE1Q8NFV5 336 aaPredicted RBP7.63□□□□□ -1.19
RNU6-407P-201ENST00000365280 PRKAR2AP13861 404 aaKnown RBP7.59□□□□□ -1.19
RNU6-407P-201ENST00000365280 CLEC11AQ9Y240 323 aa7.58□□□□□ -1.2
RNU6-407P-201ENST00000365280 EVX2Q03828 476 aa7.57□□□□□ -1.2
RNU6-407P-201ENST00000365280 SSUH2Q9Y2M2 353 aa7.57□□□□□ -1.2
RNU6-407P-201ENST00000365280 MKRN4PQ13434 485 aaPredicted RBP7.56□□□□□ -1.2
RNU6-407P-201ENST00000365280 ZNF692Q9BU19 519 aaPredicted RBP7.56□□□□□ -1.2
RNU6-407P-201ENST00000365280 C19orf67A6NJJ6 358 aa7.52□□□□□ -1.21
RNU6-407P-201ENST00000365280 PRR29P0C7W0 189 aa7.45□□□□□ -1.22
RNU6-407P-201ENST00000365280 GABBR2O75899 941 aa7.44□□□□□ -1.22
RNU6-407P-201ENST00000365280 PABPN1Q86U42 306 aaKnown RBP eCLIP7.44□□□□□ -1.22
RNU6-407P-201ENST00000365280 CHADLQ6NUI6 762 aa7.42□□□□□ -1.22
RNU6-407P-201ENST00000365280 LHX8Q68G74 356 aa7.37□□□□□ -1.23
RNU6-407P-201ENST00000365280 CLCN6P51797 869 aa7.35□□□□□ -1.23
RNU6-407P-201ENST00000365280 CD44P16070 742 aaKnown RBP7.34□□□□□ -1.23
RNU6-407P-201ENST00000365280 FARP1Q9Y4F1 1045 aaPredicted RBP7.34□□□□□ -1.23
RNU6-407P-201ENST00000365280 POTEIP0CG38 1075 aa7.25□□□□□ -1.25
RNU6-407P-201ENST00000365280 STAG3Q9UJ98 1225 aa7.25□□□□□ -1.25
RNU6-407P-201ENST00000365280 ZNF579Q8NAF0 562 aaKnown RBP7.24□□□□□ -1.25
RNU6-407P-201ENST00000365280 DCBLD2Q96PD2 775 aa7.23□□□□□ -1.25
RNU6-407P-201ENST00000365280 CSRNP3Q8WYN3 585 aa7.21□□□□□ -1.26
RNU6-407P-201ENST00000365280 ZRANB1Q9UGI0 708 aa7.2□□□□□ -1.26
RNU6-407P-201ENST00000365280 CREBZFQ9NS37 354 aa7.19□□□□□ -1.26
RNU6-407P-201ENST00000365280 PAK3O75914 559 aaPredicted RBP7.16□□□□□ -1.26
RNU6-407P-201ENST00000365280 SPDYE4A6NLX3 237 aa7.14□□□□□ -1.27
RNU6-407P-201ENST00000365280 GALR2O43603 387 aaPredicted RBP7.12□□□□□ -1.27
RNU6-407P-201ENST00000365280 NPM1P06748 294 aaKnown RBP eCLIP7.11□□□□□ -1.27
RNU6-407P-201ENST00000365280 PHF12Q96QT6 1004 aa7.07□□□□□ -1.28
RNU6-407P-201ENST00000365280 MNX1P50219 401 aaPredicted RBP7.05□□□□□ -1.28
RNU6-407P-201ENST00000365280 OTUD5Q96G74 571 aa7.04□□□□□ -1.28
RNU6-407P-201ENST00000365280 EHMT2Q96KQ7 1210 aa7.03□□□□□ -1.28
RNU6-407P-201ENST00000365280 PLSCR2Q9NRY7 297 aa7.03□□□□□ -1.28
RNU6-407P-201ENST00000365280 POTEB2H3BUK9 544 aa7□□□□□ -1.29
RNU6-407P-201ENST00000365280 ASTLQ6HA08 431 aaPredicted RBP6.99□□□□□ -1.29
RNU6-407P-201ENST00000365280 SLC39A7Q92504 469 aa6.98□□□□□ -1.29
RNU6-407P-201ENST00000365280 MS4A3Q96HJ5 214 aa6.98□□□□□ -1.29
RNU6-407P-201ENST00000365280 C7P10643 843 aa6.97□□□□□ -1.29
RNU6-407P-201ENST00000365280 PELP1Q8IZL8 1130 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms