RNA–Protein interactions for RNA: ENST00000364951.1

RNU4-9P-201, Transcript of RNA, U4 small nuclear 9, pseudogene, humanhuman

BASIC

Gene RNU4-9P, Length 139 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-9P-201ENST00000364951 AEBP2Q6ZN18 517 aaPredicted RBP14.32□□□□□ -0.12
RNU4-9P-201ENST00000364951 CHIC1Q5VXU3 224 aa13.89□□□□□ -0.19
RNU4-9P-201ENST00000364951 PHF23Q9BUL5 403 aaPredicted RBP12.26□□□□□ -0.45
RNU4-9P-201ENST00000364951 SENP3Q9H4L4 574 aaPredicted RBP12.07□□□□□ -0.48
RNU4-9P-201ENST00000364951 FOXD1Q16676 465 aa11.27□□□□□ -0.61
RNU4-9P-201ENST00000364951 PLPPR3Q6T4P5 718 aa11.22□□□□□ -0.61
RNU4-9P-201ENST00000364951 PPP6R1Q9UPN7 881 aa10.83□□□□□ -0.68
RNU4-9P-201ENST00000364951 ADRA2BP18089 450 aa10.8□□□□□ -0.68
RNU4-9P-201ENST00000364951 PIAS4Q8N2W9 510 aaPredicted RBP10.57□□□□□ -0.72
RNU4-9P-201ENST00000364951 MSH5O43196 834 aa10.34□□□□□ -0.75
RNU4-9P-201ENST00000364951 PPP4R3CPQ6ZMV5 832 aa9.9□□□□□ -0.82
RNU4-9P-201ENST00000364951 MAPK8IP2Q13387 824 aaPredicted RBP9.83□□□□□ -0.84
RNU4-9P-201ENST00000364951 SCAF1Q9H7N4 1312 aaKnown RBP9.79□□□□□ -0.84
RNU4-9P-201ENST00000364951 KCNA4P22459 653 aa9.66□□□□□ -0.86
RNU4-9P-201ENST00000364951 DMRT2Q9Y5R5 561 aa9.65□□□□□ -0.86
RNU4-9P-201ENST00000364951 CNKSR2Q8WXI2 1034 aa9.61□□□□□ -0.87
RNU4-9P-201ENST00000364951 NCBP3Q53F19 620 aaKnown RBP9.57□□□□□ -0.88
RNU4-9P-201ENST00000364951 POTEDQ86YR6 584 aa9.55□□□□□ -0.88
RNU4-9P-201ENST00000364951 NPM3O75607 178 aaKnown RBP9.51□□□□□ -0.89
RNU4-9P-201ENST00000364951 RNF216Q9NWF9 866 aaPredicted RBP9.45□□□□□ -0.9
RNU4-9P-201ENST00000364951 HOXD11P31277 338 aaPredicted RBP9.44□□□□□ -0.9
RNU4-9P-201ENST00000364951 DNAJC5BQ9UF47 199 aa9.23□□□□□ -0.93
RNU4-9P-201ENST00000364951 DCAF8L1A6NGE4 600 aa9.2□□□□□ -0.94
RNU4-9P-201ENST00000364951 SLC4A1APQ9BWU0 796 aaKnown RBP9.14□□□□□ -0.95
RNU4-9P-201ENST00000364951 SLC4A2P04920 1241 aa9.02□□□□□ -0.97
RNU4-9P-201ENST00000364951 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.95□□□□□ -0.98
RNU4-9P-201ENST00000364951 ZBTB22O15209 634 aa8.92□□□□□ -0.98
RNU4-9P-201ENST00000364951 RNF39Q9H2S5 420 aa8.9□□□□□ -0.98
RNU4-9P-201ENST00000364951 U3KPZ7 1027 aaPredicted RBP8.87□□□□□ -0.99
RNU4-9P-201ENST00000364951 EHMT2Q96KQ7 1210 aa8.86□□□□□ -0.99
RNU4-9P-201ENST00000364951 FOXD4L1Q9NU39 408 aa8.86□□□□□ -0.99
RNU4-9P-201ENST00000364951 CSRNP3Q8WYN3 585 aa8.81□□□□□ -1
RNU4-9P-201ENST00000364951 MYCNP04198 464 aaPredicted RBP8.75□□□□□ -1.01
RNU4-9P-201ENST00000364951 C1QBPQ07021 282 aaKnown RBP8.75□□□□□ -1.01
RNU4-9P-201ENST00000364951 CACNB1Q02641 598 aaPredicted RBP8.66□□□□□ -1.02
RNU4-9P-201ENST00000364951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.65□□□□□ -1.02
RNU4-9P-201ENST00000364951 HNRNPUL2Q1KMD3 747 aaKnown RBP8.65□□□□□ -1.02
RNU4-9P-201ENST00000364951 SAMD1Q6SPF0 538 aaPredicted RBP8.64□□□□□ -1.03
RNU4-9P-201ENST00000364951 SPINK5Q9NQ38 1064 aaPredicted RBP8.64□□□□□ -1.03
RNU4-9P-201ENST00000364951 ATF5Q9Y2D1 282 aaPredicted RBP8.59□□□□□ -1.03
RNU4-9P-201ENST00000364951 CAPN15O75808 1086 aa8.55□□□□□ -1.04
RNU4-9P-201ENST00000364951 ATXN8OSP0DMR3 200 aa8.53□□□□□ -1.04
RNU4-9P-201ENST00000364951 APLP2Q06481 763 aa8.53□□□□□ -1.04
RNU4-9P-201ENST00000364951 TRHP20396 242 aaPredicted RBP8.51□□□□□ -1.05
RNU4-9P-201ENST00000364951 ZNF219Q9P2Y4 722 aaPredicted RBP8.48□□□□□ -1.05
RNU4-9P-201ENST00000364951 DSG3P32926 999 aa8.46□□□□□ -1.06
RNU4-9P-201ENST00000364951 ABCB7O75027 752 aa8.41□□□□□ -1.06
RNU4-9P-201ENST00000364951 POLA2Q14181 598 aa8.37□□□□□ -1.07
RNU4-9P-201ENST00000364951 MKRN4PQ13434 485 aaPredicted RBP8.21□□□□□ -1.1
RNU4-9P-201ENST00000364951 ZBTB12Q9Y330 459 aaPredicted RBP8.17□□□□□ -1.1
RNU4-9P-201ENST00000364951 FBLN2P98095 1184 aa8.13□□□□□ -1.11
RNU4-9P-201ENST00000364951 OSCARQ8IYS5 282 aa8.1□□□□□ -1.11
RNU4-9P-201ENST00000364951 RBM42Q9BTD8 480 aaKnown RBP7.99□□□□□ -1.13
RNU4-9P-201ENST00000364951 SPDYE2BA6NHP3 402 aa7.98□□□□□ -1.13
RNU4-9P-201ENST00000364951 SPDYE6P0CI01 402 aa7.98□□□□□ -1.13
RNU4-9P-201ENST00000364951 SPDYE2Q495Y8 402 aa7.98□□□□□ -1.13
RNU4-9P-201ENST00000364951 SPDYE4A6NLX3 237 aa7.95□□□□□ -1.14
RNU4-9P-201ENST00000364951 SSUH2Q9Y2M2 353 aa7.95□□□□□ -1.14
RNU4-9P-201ENST00000364951 ZNF692Q9BU19 519 aaPredicted RBP7.94□□□□□ -1.14
RNU4-9P-201ENST00000364951 FKBP8Q14318 412 aa7.93□□□□□ -1.14
RNU4-9P-201ENST00000364951 AKT1S1Q96B36 256 aa7.91□□□□□ -1.14
RNU4-9P-201ENST00000364951 PABPN1Q86U42 306 aaKnown RBP eCLIP7.86□□□□□ -1.15
RNU4-9P-201ENST00000364951 REM2Q8IYK8 340 aaPredicted RBP7.86□□□□□ -1.15
RNU4-9P-201ENST00000364951 PROM2Q8N271 834 aa7.85□□□□□ -1.15
RNU4-9P-201ENST00000364951 PITPNM1O00562 1244 aa7.78□□□□□ -1.16
RNU4-9P-201ENST00000364951 SPDYE1Q8NFV5 336 aaPredicted RBP7.75□□□□□ -1.17
RNU4-9P-201ENST00000364951 CHRDL2Q6WN34 429 aa7.72□□□□□ -1.17
RNU4-9P-201ENST00000364951 CLEC11AQ9Y240 323 aa7.72□□□□□ -1.17
RNU4-9P-201ENST00000364951 STAG3Q9UJ98 1225 aa7.66□□□□□ -1.18
RNU4-9P-201ENST00000364951 PRR29P0C7W0 189 aa7.64□□□□□ -1.19
RNU4-9P-201ENST00000364951 FXR2P51116 673 aaKnown RBP eCLIP7.64□□□□□ -1.19
RNU4-9P-201ENST00000364951 PIP4P2Q8N4L2 257 aa7.63□□□□□ -1.19
RNU4-9P-201ENST00000364951 FBXO3Q9UK99 471 aa7.59□□□□□ -1.19
RNU4-9P-201ENST00000364951 CHADLQ6NUI6 762 aa7.58□□□□□ -1.2
RNU4-9P-201ENST00000364951 CREBZFQ9NS37 354 aa7.58□□□□□ -1.2
RNU4-9P-201ENST00000364951 PRKAR2AP13861 404 aaKnown RBP7.57□□□□□ -1.2
RNU4-9P-201ENST00000364951 VASPP50552 380 aaPredicted RBP7.55□□□□□ -1.2
RNU4-9P-201ENST00000364951 POTEHQ6S545 545 aa7.53□□□□□ -1.2
RNU4-9P-201ENST00000364951 MNX1P50219 401 aaPredicted RBP7.52□□□□□ -1.21
RNU4-9P-201ENST00000364951 MIER1Q8N108 512 aa7.52□□□□□ -1.21
RNU4-9P-201ENST00000364951 PLCD3Q8N3E9 789 aa7.49□□□□□ -1.21
RNU4-9P-201ENST00000364951 IFNLR1Q8IU57 520 aaPredicted RBP7.48□□□□□ -1.21
RNU4-9P-201ENST00000364951 FARP1Q9Y4F1 1045 aaPredicted RBP7.48□□□□□ -1.21
RNU4-9P-201ENST00000364951 PLEKHG5O94827 1062 aa7.42□□□□□ -1.22
RNU4-9P-201ENST00000364951 NUBP1P53384 320 aa7.39□□□□□ -1.23
RNU4-9P-201ENST00000364951 KLHL34Q8N239 644 aa7.39□□□□□ -1.23
RNU4-9P-201ENST00000364951 C19orf67A6NJJ6 358 aa7.38□□□□□ -1.23
RNU4-9P-201ENST00000364951 NPM1P06748 294 aaKnown RBP eCLIP7.38□□□□□ -1.23
RNU4-9P-201ENST00000364951 EVX2Q03828 476 aa7.38□□□□□ -1.23
RNU4-9P-201ENST00000364951 ZBTB47Q9UFB7 747 aaPredicted RBP7.38□□□□□ -1.23
RNU4-9P-201ENST00000364951 RASEFQ8IZ41 740 aa7.37□□□□□ -1.23
RNU4-9P-201ENST00000364951 HAX1O00165 279 aa7.36□□□□□ -1.23
RNU4-9P-201ENST00000364951 SPOCK2Q92563 424 aa7.35□□□□□ -1.23
RNU4-9P-201ENST00000364951 CD44P16070 742 aaKnown RBP7.34□□□□□ -1.23
RNU4-9P-201ENST00000364951 TSPYL2Q9H2G4 693 aaPredicted RBP7.3□□□□□ -1.24
RNU4-9P-201ENST00000364951 ZRANB1Q9UGI0 708 aa7.29□□□□□ -1.24
RNU4-9P-201ENST00000364951 CCDC61Q9Y6R9 512 aa7.28□□□□□ -1.24
RNU4-9P-201ENST00000364951 FAM212AQ96EL1 285 aa7.27□□□□□ -1.25
RNU4-9P-201ENST00000364951 PAK3O75914 559 aaPredicted RBP7.25□□□□□ -1.25
RNU4-9P-201ENST00000364951 DCAF8Q5TAQ9 597 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms