RNA–Protein interactions for RNA: ENST00000364383.1

RNU4-10P-201, Transcript of RNA, U4 small nuclear 10, pseudogene, humanhuman

BASIC

Gene RNU4-10P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-10P-201ENST00000364383 AEBP2Q6ZN18 517 aaPredicted RBP13.73□□□□□ -0.21
RNU4-10P-201ENST00000364383 CHIC1Q5VXU3 224 aa13.14□□□□□ -0.31
RNU4-10P-201ENST00000364383 SENP3Q9H4L4 574 aaPredicted RBP11.95□□□□□ -0.5
RNU4-10P-201ENST00000364383 PHF23Q9BUL5 403 aaPredicted RBP11.69□□□□□ -0.54
RNU4-10P-201ENST00000364383 FOXD1Q16676 465 aa10.99□□□□□ -0.65
RNU4-10P-201ENST00000364383 PLPPR3Q6T4P5 718 aa10.57□□□□□ -0.72
RNU4-10P-201ENST00000364383 MSH5O43196 834 aa10.5□□□□□ -0.73
RNU4-10P-201ENST00000364383 PIAS4Q8N2W9 510 aaPredicted RBP10.34□□□□□ -0.75
RNU4-10P-201ENST00000364383 ADRA2BP18089 450 aa10.16□□□□□ -0.78
RNU4-10P-201ENST00000364383 PPP6R1Q9UPN7 881 aa10.16□□□□□ -0.78
RNU4-10P-201ENST00000364383 POTEDQ86YR6 584 aa10.15□□□□□ -0.78
RNU4-10P-201ENST00000364383 SCAF1Q9H7N4 1312 aaKnown RBP9.57□□□□□ -0.88
RNU4-10P-201ENST00000364383 DMRT2Q9Y5R5 561 aa9.41□□□□□ -0.9
RNU4-10P-201ENST00000364383 MAPK8IP2Q13387 824 aaPredicted RBP9.31□□□□□ -0.92
RNU4-10P-201ENST00000364383 PPP4R3CPQ6ZMV5 832 aa9.18□□□□□ -0.94
RNU4-10P-201ENST00000364383 CNKSR2Q8WXI2 1034 aa9.09□□□□□ -0.95
RNU4-10P-201ENST00000364383 HOXD11P31277 338 aaPredicted RBP9.05□□□□□ -0.96
RNU4-10P-201ENST00000364383 DCAF8L1A6NGE4 600 aa9.04□□□□□ -0.96
RNU4-10P-201ENST00000364383 RNF216Q9NWF9 866 aaPredicted RBP9.01□□□□□ -0.97
RNU4-10P-201ENST00000364383 CACNB1Q02641 598 aaPredicted RBP8.97□□□□□ -0.97
RNU4-10P-201ENST00000364383 NCBP3Q53F19 620 aaKnown RBP8.96□□□□□ -0.98
RNU4-10P-201ENST00000364383 DNAJC5BQ9UF47 199 aa8.88□□□□□ -0.99
RNU4-10P-201ENST00000364383 RNF39Q9H2S5 420 aa8.84□□□□□ -0.99
RNU4-10P-201ENST00000364383 C1QBPQ07021 282 aaKnown RBP8.81□□□□□ -1
RNU4-10P-201ENST00000364383 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.67□□□□□ -1.02
RNU4-10P-201ENST00000364383 NPM3O75607 178 aaKnown RBP8.65□□□□□ -1.02
RNU4-10P-201ENST00000364383 APLP2Q06481 763 aa8.43□□□□□ -1.06
RNU4-10P-201ENST00000364383 KCNA4P22459 653 aa8.4□□□□□ -1.06
RNU4-10P-201ENST00000364383 U3KPZ7 1027 aaPredicted RBP8.38□□□□□ -1.07
RNU4-10P-201ENST00000364383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.36□□□□□ -1.07
RNU4-10P-201ENST00000364383 HNRNPUL2Q1KMD3 747 aaKnown RBP8.36□□□□□ -1.07
RNU4-10P-201ENST00000364383 CAPN15O75808 1086 aa8.34□□□□□ -1.07
RNU4-10P-201ENST00000364383 ZNF219Q9P2Y4 722 aaPredicted RBP8.26□□□□□ -1.09
RNU4-10P-201ENST00000364383 SAMD1Q6SPF0 538 aaPredicted RBP8.25□□□□□ -1.09
RNU4-10P-201ENST00000364383 DSG3P32926 999 aa8.24□□□□□ -1.09
RNU4-10P-201ENST00000364383 SPINK5Q9NQ38 1064 aaPredicted RBP8.23□□□□□ -1.09
RNU4-10P-201ENST00000364383 SLC4A2P04920 1241 aa8.22□□□□□ -1.09
RNU4-10P-201ENST00000364383 TRHP20396 242 aaPredicted RBP8.17□□□□□ -1.1
RNU4-10P-201ENST00000364383 MYCNP04198 464 aaPredicted RBP8.11□□□□□ -1.11
RNU4-10P-201ENST00000364383 ABCB7O75027 752 aa8.06□□□□□ -1.12
RNU4-10P-201ENST00000364383 RBM42Q9BTD8 480 aaKnown RBP8.05□□□□□ -1.12
RNU4-10P-201ENST00000364383 SLC4A1APQ9BWU0 796 aaKnown RBP8.01□□□□□ -1.13
RNU4-10P-201ENST00000364383 POTEHQ6S545 545 aa8□□□□□ -1.13
RNU4-10P-201ENST00000364383 FOXD4L1Q9NU39 408 aa7.97□□□□□ -1.13
RNU4-10P-201ENST00000364383 POLA2Q14181 598 aa7.94□□□□□ -1.14
RNU4-10P-201ENST00000364383 ZBTB12Q9Y330 459 aaPredicted RBP7.94□□□□□ -1.14
RNU4-10P-201ENST00000364383 ATXN8OSP0DMR3 200 aa7.81□□□□□ -1.16
RNU4-10P-201ENST00000364383 AKT1S1Q96B36 256 aa7.78□□□□□ -1.16
RNU4-10P-201ENST00000364383 CHRDL2Q6WN34 429 aa7.76□□□□□ -1.17
RNU4-10P-201ENST00000364383 ATF5Q9Y2D1 282 aaPredicted RBP7.71□□□□□ -1.18
RNU4-10P-201ENST00000364383 FBLN2P98095 1184 aa7.68□□□□□ -1.18
RNU4-10P-201ENST00000364383 ZBTB22O15209 634 aa7.64□□□□□ -1.19
RNU4-10P-201ENST00000364383 OSCARQ8IYS5 282 aa7.64□□□□□ -1.19
RNU4-10P-201ENST00000364383 SPDYE2BA6NHP3 402 aa7.62□□□□□ -1.19
RNU4-10P-201ENST00000364383 SPDYE6P0CI01 402 aa7.62□□□□□ -1.19
RNU4-10P-201ENST00000364383 SPDYE2Q495Y8 402 aa7.62□□□□□ -1.19
RNU4-10P-201ENST00000364383 REM2Q8IYK8 340 aaPredicted RBP7.62□□□□□ -1.19
RNU4-10P-201ENST00000364383 PITPNM1O00562 1244 aa7.52□□□□□ -1.21
RNU4-10P-201ENST00000364383 PIP4P2Q8N4L2 257 aa7.52□□□□□ -1.21
RNU4-10P-201ENST00000364383 SPDYE1Q8NFV5 336 aaPredicted RBP7.51□□□□□ -1.21
RNU4-10P-201ENST00000364383 FXR2P51116 673 aaKnown RBP eCLIP7.5□□□□□ -1.21
RNU4-10P-201ENST00000364383 SP7Q8TDD2 431 aaPredicted RBP7.49□□□□□ -1.21
RNU4-10P-201ENST00000364383 ZNF692Q9BU19 519 aaPredicted RBP7.48□□□□□ -1.21
RNU4-10P-201ENST00000364383 HAX1O00165 279 aa7.45□□□□□ -1.22
RNU4-10P-201ENST00000364383 CLEC11AQ9Y240 323 aa7.42□□□□□ -1.22
RNU4-10P-201ENST00000364383 SSUH2Q9Y2M2 353 aa7.42□□□□□ -1.22
RNU4-10P-201ENST00000364383 MKRN4PQ13434 485 aaPredicted RBP7.39□□□□□ -1.23
RNU4-10P-201ENST00000364383 PRKAR2AP13861 404 aaKnown RBP7.37□□□□□ -1.23
RNU4-10P-201ENST00000364383 PRR29P0C7W0 189 aa7.34□□□□□ -1.23
RNU4-10P-201ENST00000364383 PABPN1Q86U42 306 aaKnown RBP eCLIP7.32□□□□□ -1.24
RNU4-10P-201ENST00000364383 CSRNP3Q8WYN3 585 aa7.31□□□□□ -1.24
RNU4-10P-201ENST00000364383 STAG3Q9UJ98 1225 aa7.27□□□□□ -1.25
RNU4-10P-201ENST00000364383 C19orf67A6NJJ6 358 aa7.26□□□□□ -1.25
RNU4-10P-201ENST00000364383 CLCN6P51797 869 aa7.26□□□□□ -1.25
RNU4-10P-201ENST00000364383 EHMT2Q96KQ7 1210 aa7.21□□□□□ -1.26
RNU4-10P-201ENST00000364383 CHADLQ6NUI6 762 aa7.19□□□□□ -1.26
RNU4-10P-201ENST00000364383 EVX2Q03828 476 aa7.17□□□□□ -1.26
RNU4-10P-201ENST00000364383 FARP1Q9Y4F1 1045 aaPredicted RBP7.16□□□□□ -1.26
RNU4-10P-201ENST00000364383 SPDYE4A6NLX3 237 aa7.14□□□□□ -1.27
RNU4-10P-201ENST00000364383 GABBR2O75899 941 aa7.14□□□□□ -1.27
RNU4-10P-201ENST00000364383 CD44P16070 742 aaKnown RBP7.14□□□□□ -1.27
RNU4-10P-201ENST00000364383 PAK3O75914 559 aaPredicted RBP7.11□□□□□ -1.27
RNU4-10P-201ENST00000364383 NPM1P06748 294 aaKnown RBP eCLIP7.09□□□□□ -1.27
RNU4-10P-201ENST00000364383 DCBLD2Q96PD2 775 aa7.05□□□□□ -1.28
RNU4-10P-201ENST00000364383 ZNF579Q8NAF0 562 aaKnown RBP7.04□□□□□ -1.28
RNU4-10P-201ENST00000364383 PLEKHG5O94827 1062 aa7.03□□□□□ -1.28
RNU4-10P-201ENST00000364383 CREBZFQ9NS37 354 aa7.03□□□□□ -1.28
RNU4-10P-201ENST00000364383 ZRANB1Q9UGI0 708 aa7.03□□□□□ -1.28
RNU4-10P-201ENST00000364383 LHX8Q68G74 356 aa7.02□□□□□ -1.29
RNU4-10P-201ENST00000364383 PROM2Q8N271 834 aa6.92□□□□□ -1.3
RNU4-10P-201ENST00000364383 ZBTB47Q9UFB7 747 aaPredicted RBP6.9□□□□□ -1.3
RNU4-10P-201ENST00000364383 POTEIP0CG38 1075 aa6.89□□□□□ -1.31
RNU4-10P-201ENST00000364383 MNX1P50219 401 aaPredicted RBP6.88□□□□□ -1.31
RNU4-10P-201ENST00000364383 GALR2O43603 387 aaPredicted RBP6.87□□□□□ -1.31
RNU4-10P-201ENST00000364383 MIER1Q8N108 512 aa6.86□□□□□ -1.31
RNU4-10P-201ENST00000364383 PHF12Q96QT6 1004 aa6.84□□□□□ -1.31
RNU4-10P-201ENST00000364383 SLC39A7Q92504 469 aa6.83□□□□□ -1.32
RNU4-10P-201ENST00000364383 PLCD3Q8N3E9 789 aa6.82□□□□□ -1.32
RNU4-10P-201ENST00000364383 C7P10643 843 aa6.81□□□□□ -1.32
RNU4-10P-201ENST00000364383 TSPYL2Q9H2G4 693 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms