RNA–Protein interactions for RNA: ENST00000364328.1

RNU6-879P-201, Transcript of RNA, U6 small nuclear 879, pseudogene, humanhuman

BASIC

Gene RNU6-879P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-879P-201ENST00000364328 AEBP2Q6ZN18 517 aaPredicted RBP14.53□□□□□ -0.08
RNU6-879P-201ENST00000364328 CHIC1Q5VXU3 224 aa14.08□□□□□ -0.16
RNU6-879P-201ENST00000364328 SENP3Q9H4L4 574 aaPredicted RBP12.41□□□□□ -0.42
RNU6-879P-201ENST00000364328 PHF23Q9BUL5 403 aaPredicted RBP12.33□□□□□ -0.44
RNU6-879P-201ENST00000364328 FOXD1Q16676 465 aa11.49□□□□□ -0.57
RNU6-879P-201ENST00000364328 PLPPR3Q6T4P5 718 aa11.37□□□□□ -0.59
RNU6-879P-201ENST00000364328 PPP6R1Q9UPN7 881 aa10.9□□□□□ -0.66
RNU6-879P-201ENST00000364328 ADRA2BP18089 450 aa10.86□□□□□ -0.67
RNU6-879P-201ENST00000364328 PIAS4Q8N2W9 510 aaPredicted RBP10.78□□□□□ -0.68
RNU6-879P-201ENST00000364328 MSH5O43196 834 aa10.72□□□□□ -0.69
RNU6-879P-201ENST00000364328 SCAF1Q9H7N4 1312 aaKnown RBP10.05□□□□□ -0.8
RNU6-879P-201ENST00000364328 POTEDQ86YR6 584 aa9.98□□□□□ -0.81
RNU6-879P-201ENST00000364328 PPP4R3CPQ6ZMV5 832 aa9.97□□□□□ -0.81
RNU6-879P-201ENST00000364328 MAPK8IP2Q13387 824 aaPredicted RBP9.89□□□□□ -0.83
RNU6-879P-201ENST00000364328 DMRT2Q9Y5R5 561 aa9.88□□□□□ -0.83
RNU6-879P-201ENST00000364328 CNKSR2Q8WXI2 1034 aa9.76□□□□□ -0.85
RNU6-879P-201ENST00000364328 NCBP3Q53F19 620 aaKnown RBP9.7□□□□□ -0.86
RNU6-879P-201ENST00000364328 HOXD11P31277 338 aaPredicted RBP9.64□□□□□ -0.87
RNU6-879P-201ENST00000364328 RNF216Q9NWF9 866 aaPredicted RBP9.63□□□□□ -0.87
RNU6-879P-201ENST00000364328 NPM3O75607 178 aaKnown RBP9.52□□□□□ -0.89
RNU6-879P-201ENST00000364328 KCNA4P22459 653 aa9.52□□□□□ -0.89
RNU6-879P-201ENST00000364328 DNAJC5BQ9UF47 199 aa9.43□□□□□ -0.9
RNU6-879P-201ENST00000364328 DCAF8L1A6NGE4 600 aa9.33□□□□□ -0.92
RNU6-879P-201ENST00000364328 RNF39Q9H2S5 420 aa9.15□□□□□ -0.94
RNU6-879P-201ENST00000364328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.1□□□□□ -0.95
RNU6-879P-201ENST00000364328 C1QBPQ07021 282 aaKnown RBP9.06□□□□□ -0.96
RNU6-879P-201ENST00000364328 SLC4A1APQ9BWU0 796 aaKnown RBP9.05□□□□□ -0.96
RNU6-879P-201ENST00000364328 SLC4A2P04920 1241 aa9.03□□□□□ -0.96
RNU6-879P-201ENST00000364328 CACNB1Q02641 598 aaPredicted RBP8.97□□□□□ -0.97
RNU6-879P-201ENST00000364328 U3KPZ7 1027 aaPredicted RBP8.96□□□□□ -0.98
RNU6-879P-201ENST00000364328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.86□□□□□ -0.99
RNU6-879P-201ENST00000364328 HNRNPUL2Q1KMD3 747 aaKnown RBP8.86□□□□□ -0.99
RNU6-879P-201ENST00000364328 FOXD4L1Q9NU39 408 aa8.86□□□□□ -0.99
RNU6-879P-201ENST00000364328 MYCNP04198 464 aaPredicted RBP8.83□□□□□ -1
RNU6-879P-201ENST00000364328 APLP2Q06481 763 aa8.81□□□□□ -1
RNU6-879P-201ENST00000364328 SAMD1Q6SPF0 538 aaPredicted RBP8.8□□□□□ -1
RNU6-879P-201ENST00000364328 ZBTB22O15209 634 aa8.76□□□□□ -1.01
RNU6-879P-201ENST00000364328 SPINK5Q9NQ38 1064 aaPredicted RBP8.71□□□□□ -1.02
RNU6-879P-201ENST00000364328 CAPN15O75808 1086 aa8.68□□□□□ -1.02
RNU6-879P-201ENST00000364328 ZNF219Q9P2Y4 722 aaPredicted RBP8.68□□□□□ -1.02
RNU6-879P-201ENST00000364328 ATXN8OSP0DMR3 200 aa8.63□□□□□ -1.03
RNU6-879P-201ENST00000364328 DSG3P32926 999 aa8.63□□□□□ -1.03
RNU6-879P-201ENST00000364328 TRHP20396 242 aaPredicted RBP8.59□□□□□ -1.03
RNU6-879P-201ENST00000364328 CSRNP3Q8WYN3 585 aa8.59□□□□□ -1.03
RNU6-879P-201ENST00000364328 EHMT2Q96KQ7 1210 aa8.53□□□□□ -1.04
RNU6-879P-201ENST00000364328 ATF5Q9Y2D1 282 aaPredicted RBP8.53□□□□□ -1.04
RNU6-879P-201ENST00000364328 ABCB7O75027 752 aa8.48□□□□□ -1.05
RNU6-879P-201ENST00000364328 POLA2Q14181 598 aa8.46□□□□□ -1.06
RNU6-879P-201ENST00000364328 ZBTB12Q9Y330 459 aaPredicted RBP8.39□□□□□ -1.07
RNU6-879P-201ENST00000364328 RBM42Q9BTD8 480 aaKnown RBP8.28□□□□□ -1.08
RNU6-879P-201ENST00000364328 FBLN2P98095 1184 aa8.24□□□□□ -1.09
RNU6-879P-201ENST00000364328 MKRN4PQ13434 485 aaPredicted RBP8.18□□□□□ -1.1
RNU6-879P-201ENST00000364328 OSCARQ8IYS5 282 aa8.16□□□□□ -1.1
RNU6-879P-201ENST00000364328 SPDYE2BA6NHP3 402 aa8.13□□□□□ -1.11
RNU6-879P-201ENST00000364328 SPDYE6P0CI01 402 aa8.13□□□□□ -1.11
RNU6-879P-201ENST00000364328 SPDYE2Q495Y8 402 aa8.13□□□□□ -1.11
RNU6-879P-201ENST00000364328 AKT1S1Q96B36 256 aa8.13□□□□□ -1.11
RNU6-879P-201ENST00000364328 SSUH2Q9Y2M2 353 aa8.05□□□□□ -1.12
RNU6-879P-201ENST00000364328 REM2Q8IYK8 340 aaPredicted RBP8.01□□□□□ -1.13
RNU6-879P-201ENST00000364328 ZNF692Q9BU19 519 aaPredicted RBP8.01□□□□□ -1.13
RNU6-879P-201ENST00000364328 CHRDL2Q6WN34 429 aa7.94□□□□□ -1.14
RNU6-879P-201ENST00000364328 SPDYE4A6NLX3 237 aa7.92□□□□□ -1.14
RNU6-879P-201ENST00000364328 PITPNM1O00562 1244 aa7.91□□□□□ -1.14
RNU6-879P-201ENST00000364328 SPDYE1Q8NFV5 336 aaPredicted RBP7.91□□□□□ -1.14
RNU6-879P-201ENST00000364328 PABPN1Q86U42 306 aaKnown RBP eCLIP7.89□□□□□ -1.15
RNU6-879P-201ENST00000364328 POTEHQ6S545 545 aa7.87□□□□□ -1.15
RNU6-879P-201ENST00000364328 PROM2Q8N271 834 aa7.86□□□□□ -1.15
RNU6-879P-201ENST00000364328 FXR2P51116 673 aaKnown RBP eCLIP7.84□□□□□ -1.15
RNU6-879P-201ENST00000364328 STAG3Q9UJ98 1225 aa7.81□□□□□ -1.16
RNU6-879P-201ENST00000364328 PIP4P2Q8N4L2 257 aa7.8□□□□□ -1.16
RNU6-879P-201ENST00000364328 CLEC11AQ9Y240 323 aa7.79□□□□□ -1.16
RNU6-879P-201ENST00000364328 PRR29P0C7W0 189 aa7.75□□□□□ -1.17
RNU6-879P-201ENST00000364328 FKBP8Q14318 412 aa7.74□□□□□ -1.17
RNU6-879P-201ENST00000364328 PRKAR2AP13861 404 aaKnown RBP7.69□□□□□ -1.18
RNU6-879P-201ENST00000364328 CREBZFQ9NS37 354 aa7.63□□□□□ -1.19
RNU6-879P-201ENST00000364328 CHADLQ6NUI6 762 aa7.61□□□□□ -1.19
RNU6-879P-201ENST00000364328 FBXO3Q9UK99 471 aa7.6□□□□□ -1.19
RNU6-879P-201ENST00000364328 FARP1Q9Y4F1 1045 aaPredicted RBP7.6□□□□□ -1.19
RNU6-879P-201ENST00000364328 C19orf67A6NJJ6 358 aa7.58□□□□□ -1.2
RNU6-879P-201ENST00000364328 HAX1O00165 279 aa7.56□□□□□ -1.2
RNU6-879P-201ENST00000364328 MNX1P50219 401 aaPredicted RBP7.55□□□□□ -1.2
RNU6-879P-201ENST00000364328 PLEKHG5O94827 1062 aa7.53□□□□□ -1.2
RNU6-879P-201ENST00000364328 NPM1P06748 294 aaKnown RBP eCLIP7.52□□□□□ -1.21
RNU6-879P-201ENST00000364328 SP7Q8TDD2 431 aaPredicted RBP7.51□□□□□ -1.21
RNU6-879P-201ENST00000364328 MIER1Q8N108 512 aa7.5□□□□□ -1.21
RNU6-879P-201ENST00000364328 ZBTB47Q9UFB7 747 aaPredicted RBP7.49□□□□□ -1.21
RNU6-879P-201ENST00000364328 PLCD3Q8N3E9 789 aa7.48□□□□□ -1.21
RNU6-879P-201ENST00000364328 CD44P16070 742 aaKnown RBP7.47□□□□□ -1.21
RNU6-879P-201ENST00000364328 EVX2Q03828 476 aa7.47□□□□□ -1.21
RNU6-879P-201ENST00000364328 VASPP50552 380 aaPredicted RBP7.46□□□□□ -1.22
RNU6-879P-201ENST00000364328 CLCN6P51797 869 aa7.46□□□□□ -1.22
RNU6-879P-201ENST00000364328 PAK3O75914 559 aaPredicted RBP7.42□□□□□ -1.22
RNU6-879P-201ENST00000364328 ZNF579Q8NAF0 562 aaKnown RBP7.42□□□□□ -1.22
RNU6-879P-201ENST00000364328 ZRANB1Q9UGI0 708 aa7.39□□□□□ -1.23
RNU6-879P-201ENST00000364328 NUBP1P53384 320 aa7.37□□□□□ -1.23
RNU6-879P-201ENST00000364328 GABBR2O75899 941 aa7.36□□□□□ -1.23
RNU6-879P-201ENST00000364328 RASEFQ8IZ41 740 aa7.35□□□□□ -1.23
RNU6-879P-201ENST00000364328 CCDC61Q9Y6R9 512 aa7.34□□□□□ -1.23
RNU6-879P-201ENST00000364328 IFNLR1Q8IU57 520 aaPredicted RBP7.33□□□□□ -1.24
RNU6-879P-201ENST00000364328 KLHL34Q8N239 644 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms