RNA–Protein interactions for RNA: ENST00000364266.1

RNU6-353P-201, Transcript of RNA, U6 small nuclear 353, pseudogene, humanhuman

BASIC

Gene RNU6-353P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-353P-201ENST00000364266 AEBP2Q6ZN18 517 aaPredicted RBP20.12■□□□□ 0.81
RNU6-353P-201ENST00000364266 CHIC1Q5VXU3 224 aa20.07■□□□□ 0.8
RNU6-353P-201ENST00000364266 PHF23Q9BUL5 403 aaPredicted RBP17.66■□□□□ 0.42
RNU6-353P-201ENST00000364266 SENP3Q9H4L4 574 aaPredicted RBP17.1■□□□□ 0.33
RNU6-353P-201ENST00000364266 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.24
RNU6-353P-201ENST00000364266 FOXD1Q16676 465 aa15.77■□□□□ 0.12
RNU6-353P-201ENST00000364266 ADRA2BP18089 450 aa15.5■□□□□ 0.07
RNU6-353P-201ENST00000364266 PPP6R1Q9UPN7 881 aa15.45■□□□□ 0.06
RNU6-353P-201ENST00000364266 PIAS4Q8N2W9 510 aaPredicted RBP15.02■□□□□ -0
RNU6-353P-201ENST00000364266 KCNA4P22459 653 aa14.66□□□□□ -0.06
RNU6-353P-201ENST00000364266 PPP4R3CPQ6ZMV5 832 aa14.59□□□□□ -0.07
RNU6-353P-201ENST00000364266 MSH5O43196 834 aa14.45□□□□□ -0.1
RNU6-353P-201ENST00000364266 NCBP3Q53F19 620 aaKnown RBP14.38□□□□□ -0.11
RNU6-353P-201ENST00000364266 SCAF1Q9H7N4 1312 aaKnown RBP14.26□□□□□ -0.13
RNU6-353P-201ENST00000364266 EHMT2Q96KQ7 1210 aa14.14□□□□□ -0.15
RNU6-353P-201ENST00000364266 CNKSR2Q8WXI2 1034 aa14.1□□□□□ -0.15
RNU6-353P-201ENST00000364266 NPM3O75607 178 aaKnown RBP14.09□□□□□ -0.15
RNU6-353P-201ENST00000364266 SLC4A1APQ9BWU0 796 aaKnown RBP14.09□□□□□ -0.15
RNU6-353P-201ENST00000364266 MAPK8IP2Q13387 824 aaPredicted RBP13.94□□□□□ -0.18
RNU6-353P-201ENST00000364266 CSRNP3Q8WYN3 585 aa13.73□□□□□ -0.21
RNU6-353P-201ENST00000364266 RNF216Q9NWF9 866 aaPredicted RBP13.72□□□□□ -0.21
RNU6-353P-201ENST00000364266 DMRT2Q9Y5R5 561 aa13.68□□□□□ -0.22
RNU6-353P-201ENST00000364266 DNAJC5BQ9UF47 199 aa13.57□□□□□ -0.24
RNU6-353P-201ENST00000364266 HOXD11P31277 338 aaPredicted RBP13.54□□□□□ -0.24
RNU6-353P-201ENST00000364266 ZBTB22O15209 634 aa13.46□□□□□ -0.25
RNU6-353P-201ENST00000364266 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
RNU6-353P-201ENST00000364266 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
RNU6-353P-201ENST00000364266 DCAF8L1A6NGE4 600 aa13.16□□□□□ -0.3
RNU6-353P-201ENST00000364266 MYCNP04198 464 aaPredicted RBP13.04□□□□□ -0.32
RNU6-353P-201ENST00000364266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.98□□□□□ -0.33
RNU6-353P-201ENST00000364266 ATXN8OSP0DMR3 200 aa12.91□□□□□ -0.34
RNU6-353P-201ENST00000364266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.8□□□□□ -0.36
RNU6-353P-201ENST00000364266 HNRNPUL2Q1KMD3 747 aaKnown RBP12.8□□□□□ -0.36
RNU6-353P-201ENST00000364266 SAMD1Q6SPF0 538 aaPredicted RBP12.75□□□□□ -0.37
RNU6-353P-201ENST00000364266 U3KPZ7 1027 aaPredicted RBP12.74□□□□□ -0.37
RNU6-353P-201ENST00000364266 APLP2Q06481 763 aa12.6□□□□□ -0.39
RNU6-353P-201ENST00000364266 ATF5Q9Y2D1 282 aaPredicted RBP12.6□□□□□ -0.39
RNU6-353P-201ENST00000364266 FKBP8Q14318 412 aa12.45□□□□□ -0.42
RNU6-353P-201ENST00000364266 POTEDQ86YR6 584 aa12.43□□□□□ -0.42
RNU6-353P-201ENST00000364266 ZNF219Q9P2Y4 722 aaPredicted RBP12.43□□□□□ -0.42
RNU6-353P-201ENST00000364266 RNF39Q9H2S5 420 aa12.37□□□□□ -0.43
RNU6-353P-201ENST00000364266 TRHP20396 242 aaPredicted RBP12.31□□□□□ -0.44
RNU6-353P-201ENST00000364266 CAPN15O75808 1086 aa12.28□□□□□ -0.44
RNU6-353P-201ENST00000364266 C1QBPQ07021 282 aaKnown RBP12.28□□□□□ -0.44
RNU6-353P-201ENST00000364266 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.45
RNU6-353P-201ENST00000364266 POLA2Q14181 598 aa12.17□□□□□ -0.46
RNU6-353P-201ENST00000364266 FBLN2P98095 1184 aa12.16□□□□□ -0.46
RNU6-353P-201ENST00000364266 MKRN4PQ13434 485 aaPredicted RBP12.08□□□□□ -0.48
RNU6-353P-201ENST00000364266 SPDYE4A6NLX3 237 aa12.07□□□□□ -0.48
RNU6-353P-201ENST00000364266 ABCB7O75027 752 aa12.05□□□□□ -0.48
RNU6-353P-201ENST00000364266 AMER1Q5JTC6 1135 aaPredicted RBP12.04□□□□□ -0.48
RNU6-353P-201ENST00000364266 ZBTB12Q9Y330 459 aaPredicted RBP12.04□□□□□ -0.48
RNU6-353P-201ENST00000364266 RTN4Q9NQC3 1192 aaKnown RBP11.97□□□□□ -0.49
RNU6-353P-201ENST00000364266 FBXO3Q9UK99 471 aa11.94□□□□□ -0.5
RNU6-353P-201ENST00000364266 DSG3P32926 999 aa11.91□□□□□ -0.5
RNU6-353P-201ENST00000364266 CACNB1Q02641 598 aaPredicted RBP11.84□□□□□ -0.51
RNU6-353P-201ENST00000364266 PROM2Q8N271 834 aa11.83□□□□□ -0.52
RNU6-353P-201ENST00000364266 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
RNU6-353P-201ENST00000364266 OSCARQ8IYS5 282 aa11.73□□□□□ -0.53
RNU6-353P-201ENST00000364266 VASPP50552 380 aaPredicted RBP11.71□□□□□ -0.53
RNU6-353P-201ENST00000364266 SPDYE2BA6NHP3 402 aa11.7□□□□□ -0.54
RNU6-353P-201ENST00000364266 SPDYE6P0CI01 402 aa11.7□□□□□ -0.54
RNU6-353P-201ENST00000364266 SPDYE2Q495Y8 402 aa11.7□□□□□ -0.54
RNU6-353P-201ENST00000364266 SSUH2Q9Y2M2 353 aa11.61□□□□□ -0.55
RNU6-353P-201ENST00000364266 PABPN1Q86U42 306 aaKnown RBP eCLIP11.59□□□□□ -0.55
RNU6-353P-201ENST00000364266 STAG3Q9UJ98 1225 aa11.57□□□□□ -0.56
RNU6-353P-201ENST00000364266 IFNLR1Q8IU57 520 aaPredicted RBP11.55□□□□□ -0.56
RNU6-353P-201ENST00000364266 KLHL34Q8N239 644 aa11.5□□□□□ -0.57
RNU6-353P-201ENST00000364266 SLC24A1O60721 1099 aa11.49□□□□□ -0.57
RNU6-353P-201ENST00000364266 PLCD3Q8N3E9 789 aa11.48□□□□□ -0.57
RNU6-353P-201ENST00000364266 MIER1Q8N108 512 aa11.44□□□□□ -0.58
RNU6-353P-201ENST00000364266 SPOCK2Q92563 424 aa11.42□□□□□ -0.58
RNU6-353P-201ENST00000364266 PLEKHG5O94827 1062 aa11.4□□□□□ -0.58
RNU6-353P-201ENST00000364266 RBM42Q9BTD8 480 aaKnown RBP11.4□□□□□ -0.58
RNU6-353P-201ENST00000364266 DCAF8L2P0C7V8 631 aa11.34□□□□□ -0.59
RNU6-353P-201ENST00000364266 AKT1S1Q96B36 256 aa11.32□□□□□ -0.6
RNU6-353P-201ENST00000364266 ZBTB47Q9UFB7 747 aaPredicted RBP11.32□□□□□ -0.6
RNU6-353P-201ENST00000364266 PKD2Q13563 968 aa11.31□□□□□ -0.6
RNU6-353P-201ENST00000364266 SPDYE1Q8NFV5 336 aaPredicted RBP11.3□□□□□ -0.6
RNU6-353P-201ENST00000364266 ECM2O94769 699 aaPredicted RBP11.24□□□□□ -0.61
RNU6-353P-201ENST00000364266 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
RNU6-353P-201ENST00000364266 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
RNU6-353P-201ENST00000364266 CIZ1Q9ULV3 898 aaPredicted RBP11.2□□□□□ -0.62
RNU6-353P-201ENST00000364266 PRR29P0C7W0 189 aa11.19□□□□□ -0.62
RNU6-353P-201ENST00000364266 PLCB2Q00722 1185 aa11.11□□□□□ -0.63
RNU6-353P-201ENST00000364266 GSE1Q14687 1217 aa11.08□□□□□ -0.64
RNU6-353P-201ENST00000364266 TRIM41Q8WV44 630 aa11.08□□□□□ -0.64
RNU6-353P-201ENST00000364266 RGL2O15211 777 aa11.07□□□□□ -0.64
RNU6-353P-201ENST00000364266 CREBZFQ9NS37 354 aa11.07□□□□□ -0.64
RNU6-353P-201ENST00000364266 PITPNM1O00562 1244 aa11.06□□□□□ -0.64
RNU6-353P-201ENST00000364266 DCAF8Q5TAQ9 597 aa11.04□□□□□ -0.64
RNU6-353P-201ENST00000364266 NUBP1P53384 320 aa11.03□□□□□ -0.64
RNU6-353P-201ENST00000364266 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.03□□□□□ -0.64
RNU6-353P-201ENST00000364266 BBXQ8WY36 941 aaPredicted RBP11.01□□□□□ -0.65
RNU6-353P-201ENST00000364266 HAP1P54257 671 aaPredicted RBP11□□□□□ -0.65
RNU6-353P-201ENST00000364266 FAM212AQ96EL1 285 aa11□□□□□ -0.65
RNU6-353P-201ENST00000364266 NPM1P06748 294 aaKnown RBP eCLIP10.98□□□□□ -0.65
RNU6-353P-201ENST00000364266 MNX1P50219 401 aaPredicted RBP10.96□□□□□ -0.65
RNU6-353P-201ENST00000364266 CHGAP10645 457 aaKnown RBP10.95□□□□□ -0.66
RNU6-353P-201ENST00000364266 TAOK2Q9UL54 1235 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms