RNA–Protein interactions for RNA: ENST00000364056.1

RNU6-960P-201, Transcript of RNA, U6 small nuclear 960, pseudogene, humanhuman

BASIC

Gene RNU6-960P, Length 120 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-960P-201ENST00000364056 AEBP2Q6ZN18 517 aaPredicted RBP15.78■□□□□ 0.12
RNU6-960P-201ENST00000364056 CHIC1Q5VXU3 224 aa15.53■□□□□ 0.08
RNU6-960P-201ENST00000364056 PHF23Q9BUL5 403 aaPredicted RBP13.75□□□□□ -0.21
RNU6-960P-201ENST00000364056 SENP3Q9H4L4 574 aaPredicted RBP13.25□□□□□ -0.29
RNU6-960P-201ENST00000364056 PLPPR3Q6T4P5 718 aa12.66□□□□□ -0.38
RNU6-960P-201ENST00000364056 FOXD1Q16676 465 aa12.37□□□□□ -0.43
RNU6-960P-201ENST00000364056 ADRA2BP18089 450 aa12.1□□□□□ -0.47
RNU6-960P-201ENST00000364056 PPP6R1Q9UPN7 881 aa12.1□□□□□ -0.47
RNU6-960P-201ENST00000364056 PIAS4Q8N2W9 510 aaPredicted RBP11.67□□□□□ -0.54
RNU6-960P-201ENST00000364056 PPP4R3CPQ6ZMV5 832 aa11.24□□□□□ -0.61
RNU6-960P-201ENST00000364056 KCNA4P22459 653 aa11.23□□□□□ -0.61
RNU6-960P-201ENST00000364056 MSH5O43196 834 aa11.22□□□□□ -0.61
RNU6-960P-201ENST00000364056 MAPK8IP2Q13387 824 aaPredicted RBP10.95□□□□□ -0.66
RNU6-960P-201ENST00000364056 SCAF1Q9H7N4 1312 aaKnown RBP10.93□□□□□ -0.66
RNU6-960P-201ENST00000364056 NCBP3Q53F19 620 aaKnown RBP10.93□□□□□ -0.66
RNU6-960P-201ENST00000364056 NPM3O75607 178 aaKnown RBP10.84□□□□□ -0.67
RNU6-960P-201ENST00000364056 CNKSR2Q8WXI2 1034 aa10.84□□□□□ -0.67
RNU6-960P-201ENST00000364056 SLC4A1APQ9BWU0 796 aaKnown RBP10.68□□□□□ -0.7
RNU6-960P-201ENST00000364056 EHMT2Q96KQ7 1210 aa10.66□□□□□ -0.7
RNU6-960P-201ENST00000364056 DMRT2Q9Y5R5 561 aa10.63□□□□□ -0.71
RNU6-960P-201ENST00000364056 RNF216Q9NWF9 866 aaPredicted RBP10.57□□□□□ -0.72
RNU6-960P-201ENST00000364056 HOXD11P31277 338 aaPredicted RBP10.48□□□□□ -0.73
RNU6-960P-201ENST00000364056 CSRNP3Q8WYN3 585 aa10.44□□□□□ -0.74
RNU6-960P-201ENST00000364056 DNAJC5BQ9UF47 199 aa10.37□□□□□ -0.75
RNU6-960P-201ENST00000364056 ZBTB22O15209 634 aa10.34□□□□□ -0.75
RNU6-960P-201ENST00000364056 DCAF8L1A6NGE4 600 aa10.23□□□□□ -0.77
RNU6-960P-201ENST00000364056 SLC4A2P04920 1241 aa10.21□□□□□ -0.77
RNU6-960P-201ENST00000364056 FOXD4L1Q9NU39 408 aa10.2□□□□□ -0.78
RNU6-960P-201ENST00000364056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.02□□□□□ -0.81
RNU6-960P-201ENST00000364056 POTEDQ86YR6 584 aa9.97□□□□□ -0.81
RNU6-960P-201ENST00000364056 MYCNP04198 464 aaPredicted RBP9.95□□□□□ -0.82
RNU6-960P-201ENST00000364056 U3KPZ7 1027 aaPredicted RBP9.89□□□□□ -0.83
RNU6-960P-201ENST00000364056 ATF5Q9Y2D1 282 aaPredicted RBP9.8□□□□□ -0.84
RNU6-960P-201ENST00000364056 ATXN8OSP0DMR3 200 aa9.79□□□□□ -0.84
RNU6-960P-201ENST00000364056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.72□□□□□ -0.85
RNU6-960P-201ENST00000364056 HNRNPUL2Q1KMD3 747 aaKnown RBP9.72□□□□□ -0.85
RNU6-960P-201ENST00000364056 SAMD1Q6SPF0 538 aaPredicted RBP9.72□□□□□ -0.85
RNU6-960P-201ENST00000364056 RNF39Q9H2S5 420 aa9.67□□□□□ -0.86
RNU6-960P-201ENST00000364056 SPINK5Q9NQ38 1064 aaPredicted RBP9.6□□□□□ -0.87
RNU6-960P-201ENST00000364056 APLP2Q06481 763 aa9.55□□□□□ -0.88
RNU6-960P-201ENST00000364056 ZNF219Q9P2Y4 722 aaPredicted RBP9.55□□□□□ -0.88
RNU6-960P-201ENST00000364056 TRHP20396 242 aaPredicted RBP9.54□□□□□ -0.88
RNU6-960P-201ENST00000364056 C1QBPQ07021 282 aaKnown RBP9.53□□□□□ -0.88
RNU6-960P-201ENST00000364056 CAPN15O75808 1086 aa9.52□□□□□ -0.89
RNU6-960P-201ENST00000364056 POLA2Q14181 598 aa9.42□□□□□ -0.9
RNU6-960P-201ENST00000364056 FKBP8Q14318 412 aa9.41□□□□□ -0.9
RNU6-960P-201ENST00000364056 ABCB7O75027 752 aa9.39□□□□□ -0.91
RNU6-960P-201ENST00000364056 MKRN4PQ13434 485 aaPredicted RBP9.35□□□□□ -0.91
RNU6-960P-201ENST00000364056 CACNB1Q02641 598 aaPredicted RBP9.32□□□□□ -0.92
RNU6-960P-201ENST00000364056 DSG3P32926 999 aa9.3□□□□□ -0.92
RNU6-960P-201ENST00000364056 FBLN2P98095 1184 aa9.25□□□□□ -0.93
RNU6-960P-201ENST00000364056 SPDYE4A6NLX3 237 aa9.19□□□□□ -0.94
RNU6-960P-201ENST00000364056 ZBTB12Q9Y330 459 aaPredicted RBP9.14□□□□□ -0.95
RNU6-960P-201ENST00000364056 OSCARQ8IYS5 282 aa9.07□□□□□ -0.96
RNU6-960P-201ENST00000364056 PROM2Q8N271 834 aa9.02□□□□□ -0.97
RNU6-960P-201ENST00000364056 ZNF692Q9BU19 519 aaPredicted RBP9.02□□□□□ -0.97
RNU6-960P-201ENST00000364056 SPDYE2BA6NHP3 402 aa8.96□□□□□ -0.98
RNU6-960P-201ENST00000364056 SPDYE6P0CI01 402 aa8.96□□□□□ -0.98
RNU6-960P-201ENST00000364056 SPDYE2Q495Y8 402 aa8.96□□□□□ -0.98
RNU6-960P-201ENST00000364056 FBXO3Q9UK99 471 aa8.93□□□□□ -0.98
RNU6-960P-201ENST00000364056 SSUH2Q9Y2M2 353 aa8.93□□□□□ -0.98
RNU6-960P-201ENST00000364056 RTN4Q9NQC3 1192 aaKnown RBP8.92□□□□□ -0.98
RNU6-960P-201ENST00000364056 PABPN1Q86U42 306 aaKnown RBP eCLIP8.91□□□□□ -0.98
RNU6-960P-201ENST00000364056 VASPP50552 380 aaPredicted RBP8.85□□□□□ -0.99
RNU6-960P-201ENST00000364056 AMER1Q5JTC6 1135 aaPredicted RBP8.83□□□□□ -1
RNU6-960P-201ENST00000364056 IFNLR1Q8IU57 520 aaPredicted RBP8.79□□□□□ -1
RNU6-960P-201ENST00000364056 RBM42Q9BTD8 480 aaKnown RBP8.76□□□□□ -1.01
RNU6-960P-201ENST00000364056 STAG3Q9UJ98 1225 aa8.75□□□□□ -1.01
RNU6-960P-201ENST00000364056 AKT1S1Q96B36 256 aa8.74□□□□□ -1.01
RNU6-960P-201ENST00000364056 MIER1Q8N108 512 aa8.72□□□□□ -1.01
RNU6-960P-201ENST00000364056 REM2Q8IYK8 340 aaPredicted RBP8.71□□□□□ -1.02
RNU6-960P-201ENST00000364056 KLHL34Q8N239 644 aa8.7□□□□□ -1.02
RNU6-960P-201ENST00000364056 PLCD3Q8N3E9 789 aa8.7□□□□□ -1.02
RNU6-960P-201ENST00000364056 CLEC11AQ9Y240 323 aa8.69□□□□□ -1.02
RNU6-960P-201ENST00000364056 SPDYE1Q8NFV5 336 aaPredicted RBP8.66□□□□□ -1.02
RNU6-960P-201ENST00000364056 SPOCK2Q92563 424 aa8.62□□□□□ -1.03
RNU6-960P-201ENST00000364056 PRR29P0C7W0 189 aa8.61□□□□□ -1.03
RNU6-960P-201ENST00000364056 PITPNM1O00562 1244 aa8.6□□□□□ -1.03
RNU6-960P-201ENST00000364056 PKD2Q13563 968 aa8.57□□□□□ -1.04
RNU6-960P-201ENST00000364056 PLEKHG5O94827 1062 aa8.56□□□□□ -1.04
RNU6-960P-201ENST00000364056 CREBZFQ9NS37 354 aa8.56□□□□□ -1.04
RNU6-960P-201ENST00000364056 MNX1P50219 401 aaPredicted RBP8.49□□□□□ -1.05
RNU6-960P-201ENST00000364056 CHADLQ6NUI6 762 aa8.49□□□□□ -1.05
RNU6-960P-201ENST00000364056 ZBTB47Q9UFB7 747 aaPredicted RBP8.49□□□□□ -1.05
RNU6-960P-201ENST00000364056 CIZ1Q9ULV3 898 aaPredicted RBP8.49□□□□□ -1.05
RNU6-960P-201ENST00000364056 ECM2O94769 699 aaPredicted RBP8.47□□□□□ -1.05
RNU6-960P-201ENST00000364056 NUBP1P53384 320 aa8.47□□□□□ -1.05
RNU6-960P-201ENST00000364056 DCAF8L2P0C7V8 631 aa8.45□□□□□ -1.06
RNU6-960P-201ENST00000364056 DCAF8Q5TAQ9 597 aa8.42□□□□□ -1.06
RNU6-960P-201ENST00000364056 RGL2O15211 777 aa8.41□□□□□ -1.06
RNU6-960P-201ENST00000364056 PRKAR2AP13861 404 aaKnown RBP8.4□□□□□ -1.06
RNU6-960P-201ENST00000364056 FXR2P51116 673 aaKnown RBP eCLIP8.39□□□□□ -1.07
RNU6-960P-201ENST00000364056 CHRDL2Q6WN34 429 aa8.39□□□□□ -1.07
RNU6-960P-201ENST00000364056 RASEFQ8IZ41 740 aa8.39□□□□□ -1.07
RNU6-960P-201ENST00000364056 FARP1Q9Y4F1 1045 aaPredicted RBP8.37□□□□□ -1.07
RNU6-960P-201ENST00000364056 NPM1P06748 294 aaKnown RBP eCLIP8.36□□□□□ -1.07
RNU6-960P-201ENST00000364056 GSE1Q14687 1217 aa8.36□□□□□ -1.07
RNU6-960P-201ENST00000364056 PIP4P2Q8N4L2 257 aa8.36□□□□□ -1.07
RNU6-960P-201ENST00000364056 FAM212AQ96EL1 285 aa8.33□□□□□ -1.08
RNU6-960P-201ENST00000364056 TSPYL2Q9H2G4 693 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms