RNA–Protein interactions for RNA: ENST00000363883.1

SNORD56.4-201, Transcript of small nucleolar RNA, C/D box 56, humanhuman

BASIC

Gene SNORD56, Length 71 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD56.4-201ENST00000363883 AEBP2Q6ZN18 517 aaPredicted RBP21.25■□□□□ 0.99
SNORD56.4-201ENST00000363883 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
SNORD56.4-201ENST00000363883 PHF23Q9BUL5 403 aaPredicted RBP18.69■□□□□ 0.58
SNORD56.4-201ENST00000363883 SENP3Q9H4L4 574 aaPredicted RBP17.93■□□□□ 0.46
SNORD56.4-201ENST00000363883 PLPPR3Q6T4P5 718 aa17.39■□□□□ 0.37
SNORD56.4-201ENST00000363883 FOXD1Q16676 465 aa16.62■□□□□ 0.25
SNORD56.4-201ENST00000363883 ADRA2BP18089 450 aa16.39■□□□□ 0.21
SNORD56.4-201ENST00000363883 PPP6R1Q9UPN7 881 aa16.36■□□□□ 0.21
SNORD56.4-201ENST00000363883 PIAS4Q8N2W9 510 aaPredicted RBP15.8■□□□□ 0.12
SNORD56.4-201ENST00000363883 KCNA4P22459 653 aa15.59■□□□□ 0.09
SNORD56.4-201ENST00000363883 PPP4R3CPQ6ZMV5 832 aa15.41■□□□□ 0.06
SNORD56.4-201ENST00000363883 NCBP3Q53F19 620 aaKnown RBP15.11■□□□□ 0.01
SNORD56.4-201ENST00000363883 MSH5O43196 834 aa15.1■□□□□ 0.01
SNORD56.4-201ENST00000363883 EHMT2Q96KQ7 1210 aa15.08■□□□□ 0
SNORD56.4-201ENST00000363883 SCAF1Q9H7N4 1312 aaKnown RBP14.93□□□□□ -0.02
SNORD56.4-201ENST00000363883 SLC4A1APQ9BWU0 796 aaKnown RBP14.93□□□□□ -0.02
SNORD56.4-201ENST00000363883 NPM3O75607 178 aaKnown RBP14.92□□□□□ -0.02
SNORD56.4-201ENST00000363883 CNKSR2Q8WXI2 1034 aa14.85□□□□□ -0.03
SNORD56.4-201ENST00000363883 MAPK8IP2Q13387 824 aaPredicted RBP14.74□□□□□ -0.05
SNORD56.4-201ENST00000363883 CSRNP3Q8WYN3 585 aa14.63□□□□□ -0.07
SNORD56.4-201ENST00000363883 RNF216Q9NWF9 866 aaPredicted RBP14.44□□□□□ -0.1
SNORD56.4-201ENST00000363883 DMRT2Q9Y5R5 561 aa14.39□□□□□ -0.11
SNORD56.4-201ENST00000363883 ZBTB22O15209 634 aa14.36□□□□□ -0.11
SNORD56.4-201ENST00000363883 DNAJC5BQ9UF47 199 aa14.3□□□□□ -0.12
SNORD56.4-201ENST00000363883 HOXD11P31277 338 aaPredicted RBP14.25□□□□□ -0.13
SNORD56.4-201ENST00000363883 FOXD4L1Q9NU39 408 aa14.18□□□□□ -0.14
SNORD56.4-201ENST00000363883 SLC4A2P04920 1241 aa13.97□□□□□ -0.17
SNORD56.4-201ENST00000363883 DCAF8L1A6NGE4 600 aa13.83□□□□□ -0.2
SNORD56.4-201ENST00000363883 MYCNP04198 464 aaPredicted RBP13.75□□□□□ -0.21
SNORD56.4-201ENST00000363883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.64□□□□□ -0.23
SNORD56.4-201ENST00000363883 ATXN8OSP0DMR3 200 aa13.61□□□□□ -0.23
SNORD56.4-201ENST00000363883 U3KPZ7 1027 aaPredicted RBP13.45□□□□□ -0.26
SNORD56.4-201ENST00000363883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.4□□□□□ -0.26
SNORD56.4-201ENST00000363883 HNRNPUL2Q1KMD3 747 aaKnown RBP13.4□□□□□ -0.26
SNORD56.4-201ENST00000363883 ATF5Q9Y2D1 282 aaPredicted RBP13.4□□□□□ -0.26
SNORD56.4-201ENST00000363883 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
SNORD56.4-201ENST00000363883 FKBP8Q14318 412 aa13.23□□□□□ -0.29
SNORD56.4-201ENST00000363883 APLP2Q06481 763 aa13.15□□□□□ -0.3
SNORD56.4-201ENST00000363883 ZNF219Q9P2Y4 722 aaPredicted RBP13.11□□□□□ -0.31
SNORD56.4-201ENST00000363883 RNF39Q9H2S5 420 aa13□□□□□ -0.33
SNORD56.4-201ENST00000363883 POTEDQ86YR6 584 aa12.99□□□□□ -0.33
SNORD56.4-201ENST00000363883 SPINK5Q9NQ38 1064 aaPredicted RBP12.97□□□□□ -0.33
SNORD56.4-201ENST00000363883 TRHP20396 242 aaPredicted RBP12.96□□□□□ -0.33
SNORD56.4-201ENST00000363883 CAPN15O75808 1086 aa12.9□□□□□ -0.34
SNORD56.4-201ENST00000363883 C1QBPQ07021 282 aaKnown RBP12.85□□□□□ -0.35
SNORD56.4-201ENST00000363883 RTN4Q9NQC3 1192 aaKnown RBP12.85□□□□□ -0.35
SNORD56.4-201ENST00000363883 POLA2Q14181 598 aa12.83□□□□□ -0.36
SNORD56.4-201ENST00000363883 MKRN4PQ13434 485 aaPredicted RBP12.82□□□□□ -0.36
SNORD56.4-201ENST00000363883 AMER1Q5JTC6 1135 aaPredicted RBP12.82□□□□□ -0.36
SNORD56.4-201ENST00000363883 FBLN2P98095 1184 aa12.78□□□□□ -0.36
SNORD56.4-201ENST00000363883 SPDYE4A6NLX3 237 aa12.76□□□□□ -0.37
SNORD56.4-201ENST00000363883 ABCB7O75027 752 aa12.72□□□□□ -0.37
SNORD56.4-201ENST00000363883 ZBTB12Q9Y330 459 aaPredicted RBP12.61□□□□□ -0.39
SNORD56.4-201ENST00000363883 FBXO3Q9UK99 471 aa12.58□□□□□ -0.4
SNORD56.4-201ENST00000363883 PROM2Q8N271 834 aa12.55□□□□□ -0.4
SNORD56.4-201ENST00000363883 DSG3P32926 999 aa12.54□□□□□ -0.4
SNORD56.4-201ENST00000363883 VASPP50552 380 aaPredicted RBP12.43□□□□□ -0.42
SNORD56.4-201ENST00000363883 OSCARQ8IYS5 282 aa12.39□□□□□ -0.43
SNORD56.4-201ENST00000363883 CACNB1Q02641 598 aaPredicted RBP12.37□□□□□ -0.43
SNORD56.4-201ENST00000363883 ZNF692Q9BU19 519 aaPredicted RBP12.37□□□□□ -0.43
SNORD56.4-201ENST00000363883 SLC24A1O60721 1099 aa12.34□□□□□ -0.43
SNORD56.4-201ENST00000363883 SPDYE2BA6NHP3 402 aa12.3□□□□□ -0.44
SNORD56.4-201ENST00000363883 SPDYE6P0CI01 402 aa12.3□□□□□ -0.44
SNORD56.4-201ENST00000363883 SPDYE2Q495Y8 402 aa12.3□□□□□ -0.44
SNORD56.4-201ENST00000363883 IFNLR1Q8IU57 520 aaPredicted RBP12.3□□□□□ -0.44
SNORD56.4-201ENST00000363883 SSUH2Q9Y2M2 353 aa12.26□□□□□ -0.45
SNORD56.4-201ENST00000363883 PABPN1Q86U42 306 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNORD56.4-201ENST00000363883 STAG3Q9UJ98 1225 aa12.16□□□□□ -0.46
SNORD56.4-201ENST00000363883 KLHL34Q8N239 644 aa12.14□□□□□ -0.47
SNORD56.4-201ENST00000363883 PLCD3Q8N3E9 789 aa12.1□□□□□ -0.47
SNORD56.4-201ENST00000363883 MIER1Q8N108 512 aa12.07□□□□□ -0.48
SNORD56.4-201ENST00000363883 SPOCK2Q92563 424 aa12.07□□□□□ -0.48
SNORD56.4-201ENST00000363883 DCAF8L2P0C7V8 631 aa12.05□□□□□ -0.48
SNORD56.4-201ENST00000363883 PKD2Q13563 968 aa12.05□□□□□ -0.48
SNORD56.4-201ENST00000363883 PLEKHG5O94827 1062 aa11.94□□□□□ -0.5
SNORD56.4-201ENST00000363883 ECM2O94769 699 aaPredicted RBP11.92□□□□□ -0.5
SNORD56.4-201ENST00000363883 RBM42Q9BTD8 480 aaKnown RBP11.91□□□□□ -0.5
SNORD56.4-201ENST00000363883 ZBTB47Q9UFB7 747 aaPredicted RBP11.88□□□□□ -0.51
SNORD56.4-201ENST00000363883 AKT1S1Q96B36 256 aa11.87□□□□□ -0.51
SNORD56.4-201ENST00000363883 PLCB2Q00722 1185 aa11.85□□□□□ -0.51
SNORD56.4-201ENST00000363883 SPDYE1Q8NFV5 336 aaPredicted RBP11.85□□□□□ -0.51
SNORD56.4-201ENST00000363883 CIZ1Q9ULV3 898 aaPredicted RBP11.84□□□□□ -0.51
SNORD56.4-201ENST00000363883 CLEC11AQ9Y240 323 aa11.83□□□□□ -0.52
SNORD56.4-201ENST00000363883 RGL2O15211 777 aa11.79□□□□□ -0.52
SNORD56.4-201ENST00000363883 REM2Q8IYK8 340 aaPredicted RBP11.78□□□□□ -0.52
SNORD56.4-201ENST00000363883 PRR29P0C7W0 189 aa11.75□□□□□ -0.53
SNORD56.4-201ENST00000363883 HAP1P54257 671 aaPredicted RBP11.74□□□□□ -0.53
SNORD56.4-201ENST00000363883 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
SNORD56.4-201ENST00000363883 CREBZFQ9NS37 354 aa11.7□□□□□ -0.54
SNORD56.4-201ENST00000363883 NUBP1P53384 320 aa11.68□□□□□ -0.54
SNORD56.4-201ENST00000363883 BBXQ8WY36 941 aaPredicted RBP11.68□□□□□ -0.54
SNORD56.4-201ENST00000363883 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.67□□□□□ -0.54
SNORD56.4-201ENST00000363883 GSE1Q14687 1217 aa11.66□□□□□ -0.54
SNORD56.4-201ENST00000363883 TRIM41Q8WV44 630 aa11.66□□□□□ -0.54
SNORD56.4-201ENST00000363883 PITPNM1O00562 1244 aa11.65□□□□□ -0.54
SNORD56.4-201ENST00000363883 DCAF8Q5TAQ9 597 aa11.64□□□□□ -0.55
SNORD56.4-201ENST00000363883 CHGAP10645 457 aaKnown RBP11.62□□□□□ -0.55
SNORD56.4-201ENST00000363883 MNX1P50219 401 aaPredicted RBP11.62□□□□□ -0.55
SNORD56.4-201ENST00000363883 PAXIP1Q6ZW49 1069 aaPredicted RBP11.62□□□□□ -0.55
SNORD56.4-201ENST00000363883 CFAP44Q96MT7 982 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms