RNA–Protein interactions for RNA: ENST00000363767.1

RNU5F-3P-201, Transcript of RNA, U5F small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU5F-3P, Length 117 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU5F-3P-201ENST00000363767 AEBP2Q6ZN18 517 aaPredicted RBP13.39□□□□□ -0.27
RNU5F-3P-201ENST00000363767 CHIC1Q5VXU3 224 aa12.9□□□□□ -0.34
RNU5F-3P-201ENST00000363767 PHF23Q9BUL5 403 aaPredicted RBP11.51□□□□□ -0.57
RNU5F-3P-201ENST00000363767 SENP3Q9H4L4 574 aaPredicted RBP11.06□□□□□ -0.64
RNU5F-3P-201ENST00000363767 FOXD1Q16676 465 aa10.44□□□□□ -0.74
RNU5F-3P-201ENST00000363767 PLPPR3Q6T4P5 718 aa10.35□□□□□ -0.75
RNU5F-3P-201ENST00000363767 POTEDQ86YR6 584 aa10.33□□□□□ -0.76
RNU5F-3P-201ENST00000363767 PPP6R1Q9UPN7 881 aa10.16□□□□□ -0.78
RNU5F-3P-201ENST00000363767 ADRA2BP18089 450 aa10.06□□□□□ -0.8
RNU5F-3P-201ENST00000363767 PIAS4Q8N2W9 510 aaPredicted RBP9.72□□□□□ -0.85
RNU5F-3P-201ENST00000363767 MSH5O43196 834 aa9.41□□□□□ -0.9
RNU5F-3P-201ENST00000363767 PPP4R3CPQ6ZMV5 832 aa9.2□□□□□ -0.94
RNU5F-3P-201ENST00000363767 MAPK8IP2Q13387 824 aaPredicted RBP9.18□□□□□ -0.94
RNU5F-3P-201ENST00000363767 KCNA4P22459 653 aa9.1□□□□□ -0.95
RNU5F-3P-201ENST00000363767 DMRT2Q9Y5R5 561 aa8.92□□□□□ -0.98
RNU5F-3P-201ENST00000363767 NPM3O75607 178 aaKnown RBP8.89□□□□□ -0.99
RNU5F-3P-201ENST00000363767 SCAF1Q9H7N4 1312 aaKnown RBP8.87□□□□□ -0.99
RNU5F-3P-201ENST00000363767 CNKSR2Q8WXI2 1034 aa8.87□□□□□ -0.99
RNU5F-3P-201ENST00000363767 HOXD11P31277 338 aaPredicted RBP8.76□□□□□ -1.01
RNU5F-3P-201ENST00000363767 NCBP3Q53F19 620 aaKnown RBP8.75□□□□□ -1.01
RNU5F-3P-201ENST00000363767 RNF216Q9NWF9 866 aaPredicted RBP8.72□□□□□ -1.01
RNU5F-3P-201ENST00000363767 DNAJC5BQ9UF47 199 aa8.62□□□□□ -1.03
RNU5F-3P-201ENST00000363767 SLC4A1APQ9BWU0 796 aaKnown RBP8.51□□□□□ -1.05
RNU5F-3P-201ENST00000363767 ZBTB22O15209 634 aa8.5□□□□□ -1.05
RNU5F-3P-201ENST00000363767 SLC4A2P04920 1241 aa8.48□□□□□ -1.05
RNU5F-3P-201ENST00000363767 DCAF8L1A6NGE4 600 aa8.37□□□□□ -1.07
RNU5F-3P-201ENST00000363767 CSRNP3Q8WYN3 585 aa8.35□□□□□ -1.07
RNU5F-3P-201ENST00000363767 EHMT2Q96KQ7 1210 aa8.32□□□□□ -1.08
RNU5F-3P-201ENST00000363767 U3KPZ7 1027 aaPredicted RBP8.25□□□□□ -1.09
RNU5F-3P-201ENST00000363767 FOXD4L1Q9NU39 408 aa8.23□□□□□ -1.09
RNU5F-3P-201ENST00000363767 RNF39Q9H2S5 420 aa8.21□□□□□ -1.1
RNU5F-3P-201ENST00000363767 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.18□□□□□ -1.1
RNU5F-3P-201ENST00000363767 ATF5Q9Y2D1 282 aaPredicted RBP8.12□□□□□ -1.11
RNU5F-3P-201ENST00000363767 MYCNP04198 464 aaPredicted RBP8.08□□□□□ -1.12
RNU5F-3P-201ENST00000363767 SPINK5Q9NQ38 1064 aaPredicted RBP8.04□□□□□ -1.12
RNU5F-3P-201ENST00000363767 C1QBPQ07021 282 aaKnown RBP7.99□□□□□ -1.13
RNU5F-3P-201ENST00000363767 SAMD1Q6SPF0 538 aaPredicted RBP7.89□□□□□ -1.15
RNU5F-3P-201ENST00000363767 ATXN8OSP0DMR3 200 aa7.88□□□□□ -1.15
RNU5F-3P-201ENST00000363767 CACNB1Q02641 598 aaPredicted RBP7.85□□□□□ -1.15
RNU5F-3P-201ENST00000363767 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.84□□□□□ -1.15
RNU5F-3P-201ENST00000363767 HNRNPUL2Q1KMD3 747 aaKnown RBP7.84□□□□□ -1.15
RNU5F-3P-201ENST00000363767 DSG3P32926 999 aa7.83□□□□□ -1.16
RNU5F-3P-201ENST00000363767 TRHP20396 242 aaPredicted RBP7.81□□□□□ -1.16
RNU5F-3P-201ENST00000363767 CAPN15O75808 1086 aa7.8□□□□□ -1.16
RNU5F-3P-201ENST00000363767 POTEHQ6S545 545 aa7.79□□□□□ -1.16
RNU5F-3P-201ENST00000363767 ZNF219Q9P2Y4 722 aaPredicted RBP7.79□□□□□ -1.16
RNU5F-3P-201ENST00000363767 ABCB7O75027 752 aa7.77□□□□□ -1.17
RNU5F-3P-201ENST00000363767 MKRN4PQ13434 485 aaPredicted RBP7.74□□□□□ -1.17
RNU5F-3P-201ENST00000363767 POLA2Q14181 598 aa7.73□□□□□ -1.17
RNU5F-3P-201ENST00000363767 APLP2Q06481 763 aa7.66□□□□□ -1.18
RNU5F-3P-201ENST00000363767 OSCARQ8IYS5 282 aa7.51□□□□□ -1.21
RNU5F-3P-201ENST00000363767 FKBP8Q14318 412 aa7.42□□□□□ -1.22
RNU5F-3P-201ENST00000363767 PROM2Q8N271 834 aa7.41□□□□□ -1.22
RNU5F-3P-201ENST00000363767 FBLN2P98095 1184 aa7.4□□□□□ -1.22
RNU5F-3P-201ENST00000363767 SSUH2Q9Y2M2 353 aa7.4□□□□□ -1.22
RNU5F-3P-201ENST00000363767 ZBTB12Q9Y330 459 aaPredicted RBP7.4□□□□□ -1.22
RNU5F-3P-201ENST00000363767 SPDYE4A6NLX3 237 aa7.37□□□□□ -1.23
RNU5F-3P-201ENST00000363767 SPDYE2BA6NHP3 402 aa7.32□□□□□ -1.24
RNU5F-3P-201ENST00000363767 SPDYE6P0CI01 402 aa7.32□□□□□ -1.24
RNU5F-3P-201ENST00000363767 SPDYE2Q495Y8 402 aa7.32□□□□□ -1.24
RNU5F-3P-201ENST00000363767 ZNF692Q9BU19 519 aaPredicted RBP7.29□□□□□ -1.24
RNU5F-3P-201ENST00000363767 PABPN1Q86U42 306 aaKnown RBP eCLIP7.26□□□□□ -1.25
RNU5F-3P-201ENST00000363767 REM2Q8IYK8 340 aaPredicted RBP7.24□□□□□ -1.25
RNU5F-3P-201ENST00000363767 AKT1S1Q96B36 256 aa7.23□□□□□ -1.25
RNU5F-3P-201ENST00000363767 RBM42Q9BTD8 480 aaKnown RBP7.22□□□□□ -1.25
RNU5F-3P-201ENST00000363767 PITPNM1O00562 1244 aa7.2□□□□□ -1.26
RNU5F-3P-201ENST00000363767 MNX1P50219 401 aaPredicted RBP7.08□□□□□ -1.28
RNU5F-3P-201ENST00000363767 PLSCR2Q9NRY7 297 aa7.07□□□□□ -1.28
RNU5F-3P-201ENST00000363767 CREBZFQ9NS37 354 aa7.07□□□□□ -1.28
RNU5F-3P-201ENST00000363767 FXR2P51116 673 aaKnown RBP eCLIP7.06□□□□□ -1.28
RNU5F-3P-201ENST00000363767 CHRDL2Q6WN34 429 aa7.06□□□□□ -1.28
RNU5F-3P-201ENST00000363767 SPDYE1Q8NFV5 336 aaPredicted RBP7.06□□□□□ -1.28
RNU5F-3P-201ENST00000363767 CLEC11AQ9Y240 323 aa7.06□□□□□ -1.28
RNU5F-3P-201ENST00000363767 VASPP50552 380 aaPredicted RBP7.05□□□□□ -1.28
RNU5F-3P-201ENST00000363767 IFNLR1Q8IU57 520 aaPredicted RBP7.05□□□□□ -1.28
RNU5F-3P-201ENST00000363767 CHADLQ6NUI6 762 aa7.04□□□□□ -1.28
RNU5F-3P-201ENST00000363767 PIP4P2Q8N4L2 257 aa7.04□□□□□ -1.28
RNU5F-3P-201ENST00000363767 PRR29P0C7W0 189 aa6.97□□□□□ -1.29
RNU5F-3P-201ENST00000363767 STAG3Q9UJ98 1225 aa6.97□□□□□ -1.29
RNU5F-3P-201ENST00000363767 FBXO3Q9UK99 471 aa6.96□□□□□ -1.3
RNU5F-3P-201ENST00000363767 PRKAR2AP13861 404 aaKnown RBP6.94□□□□□ -1.3
RNU5F-3P-201ENST00000363767 NUBP1P53384 320 aa6.92□□□□□ -1.3
RNU5F-3P-201ENST00000363767 EVX2Q03828 476 aa6.91□□□□□ -1.3
RNU5F-3P-201ENST00000363767 MIER1Q8N108 512 aa6.91□□□□□ -1.3
RNU5F-3P-201ENST00000363767 FARP1Q9Y4F1 1045 aaPredicted RBP6.89□□□□□ -1.31
RNU5F-3P-201ENST00000363767 RASEFQ8IZ41 740 aa6.88□□□□□ -1.31
RNU5F-3P-201ENST00000363767 RTN4Q9NQC3 1192 aaKnown RBP6.87□□□□□ -1.31
RNU5F-3P-201ENST00000363767 PLCD3Q8N3E9 789 aa6.86□□□□□ -1.31
RNU5F-3P-201ENST00000363767 PKD2Q13563 968 aa6.84□□□□□ -1.31
RNU5F-3P-201ENST00000363767 C19orf67A6NJJ6 358 aa6.81□□□□□ -1.32
RNU5F-3P-201ENST00000363767 SPOCK2Q92563 424 aa6.79□□□□□ -1.32
RNU5F-3P-201ENST00000363767 RNF25Q96BH1 459 aaPredicted RBP6.78□□□□□ -1.32
RNU5F-3P-201ENST00000363767 CCDC61Q9Y6R9 512 aa6.77□□□□□ -1.33
RNU5F-3P-201ENST00000363767 KLHL34Q8N239 644 aa6.76□□□□□ -1.33
RNU5F-3P-201ENST00000363767 CD44P16070 742 aaKnown RBP6.73□□□□□ -1.33
RNU5F-3P-201ENST00000363767 PHF12Q96QT6 1004 aa6.73□□□□□ -1.33
RNU5F-3P-201ENST00000363767 TSPYL2Q9H2G4 693 aaPredicted RBP6.73□□□□□ -1.33
RNU5F-3P-201ENST00000363767 TRPC6Q9Y210 931 aa6.71□□□□□ -1.34
RNU5F-3P-201ENST00000363767 RGL2O15211 777 aa6.7□□□□□ -1.34
RNU5F-3P-201ENST00000363767 NPM1P06748 294 aaKnown RBP eCLIP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms