RNA–Protein interactions for RNA: ENST00000363752.1

RNU6-1059P-201, Transcript of RNA, U6 small nuclear 1059, pseudogene, humanhuman

BASIC

Gene RNU6-1059P, Length 98 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1059P-201ENST00000363752 AEBP2Q6ZN18 517 aaPredicted RBP16.83■□□□□ 0.28
RNU6-1059P-201ENST00000363752 CHIC1Q5VXU3 224 aa16.33■□□□□ 0.2
RNU6-1059P-201ENST00000363752 SENP3Q9H4L4 574 aaPredicted RBP14.54□□□□□ -0.08
RNU6-1059P-201ENST00000363752 PHF23Q9BUL5 403 aaPredicted RBP14.28□□□□□ -0.12
RNU6-1059P-201ENST00000363752 FOXD1Q16676 465 aa13.38□□□□□ -0.27
RNU6-1059P-201ENST00000363752 PLPPR3Q6T4P5 718 aa13.23□□□□□ -0.29
RNU6-1059P-201ENST00000363752 PIAS4Q8N2W9 510 aaPredicted RBP12.65□□□□□ -0.38
RNU6-1059P-201ENST00000363752 ADRA2BP18089 450 aa12.63□□□□□ -0.39
RNU6-1059P-201ENST00000363752 MSH5O43196 834 aa12.61□□□□□ -0.39
RNU6-1059P-201ENST00000363752 PPP6R1Q9UPN7 881 aa12.6□□□□□ -0.39
RNU6-1059P-201ENST00000363752 SCAF1Q9H7N4 1312 aaKnown RBP11.79□□□□□ -0.52
RNU6-1059P-201ENST00000363752 POTEDQ86YR6 584 aa11.77□□□□□ -0.53
RNU6-1059P-201ENST00000363752 PPP4R3CPQ6ZMV5 832 aa11.56□□□□□ -0.56
RNU6-1059P-201ENST00000363752 DMRT2Q9Y5R5 561 aa11.51□□□□□ -0.57
RNU6-1059P-201ENST00000363752 MAPK8IP2Q13387 824 aaPredicted RBP11.49□□□□□ -0.57
RNU6-1059P-201ENST00000363752 CNKSR2Q8WXI2 1034 aa11.35□□□□□ -0.59
RNU6-1059P-201ENST00000363752 NCBP3Q53F19 620 aaKnown RBP11.33□□□□□ -0.6
RNU6-1059P-201ENST00000363752 RNF216Q9NWF9 866 aaPredicted RBP11.18□□□□□ -0.62
RNU6-1059P-201ENST00000363752 HOXD11P31277 338 aaPredicted RBP11.16□□□□□ -0.62
RNU6-1059P-201ENST00000363752 DCAF8L1A6NGE4 600 aa11.07□□□□□ -0.64
RNU6-1059P-201ENST00000363752 NPM3O75607 178 aaKnown RBP10.99□□□□□ -0.65
RNU6-1059P-201ENST00000363752 KCNA4P22459 653 aa10.95□□□□□ -0.66
RNU6-1059P-201ENST00000363752 DNAJC5BQ9UF47 199 aa10.83□□□□□ -0.68
RNU6-1059P-201ENST00000363752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.71□□□□□ -0.69
RNU6-1059P-201ENST00000363752 RNF39Q9H2S5 420 aa10.67□□□□□ -0.7
RNU6-1059P-201ENST00000363752 CACNB1Q02641 598 aaPredicted RBP10.64□□□□□ -0.71
RNU6-1059P-201ENST00000363752 C1QBPQ07021 282 aaKnown RBP10.62□□□□□ -0.71
RNU6-1059P-201ENST00000363752 SLC4A1APQ9BWU0 796 aaKnown RBP10.48□□□□□ -0.73
RNU6-1059P-201ENST00000363752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.4□□□□□ -0.74
RNU6-1059P-201ENST00000363752 APLP2Q06481 763 aa10.4□□□□□ -0.74
RNU6-1059P-201ENST00000363752 HNRNPUL2Q1KMD3 747 aaKnown RBP10.4□□□□□ -0.74
RNU6-1059P-201ENST00000363752 U3KPZ7 1027 aaPredicted RBP10.4□□□□□ -0.74
RNU6-1059P-201ENST00000363752 SLC4A2P04920 1241 aa10.38□□□□□ -0.75
RNU6-1059P-201ENST00000363752 SAMD1Q6SPF0 538 aaPredicted RBP10.3□□□□□ -0.76
RNU6-1059P-201ENST00000363752 MYCNP04198 464 aaPredicted RBP10.27□□□□□ -0.77
RNU6-1059P-201ENST00000363752 FOXD4L1Q9NU39 408 aa10.26□□□□□ -0.77
RNU6-1059P-201ENST00000363752 CAPN15O75808 1086 aa10.24□□□□□ -0.77
RNU6-1059P-201ENST00000363752 ZNF219Q9P2Y4 722 aaPredicted RBP10.18□□□□□ -0.78
RNU6-1059P-201ENST00000363752 SPINK5Q9NQ38 1064 aaPredicted RBP10.15□□□□□ -0.78
RNU6-1059P-201ENST00000363752 TRHP20396 242 aaPredicted RBP10.11□□□□□ -0.79
RNU6-1059P-201ENST00000363752 DSG3P32926 999 aa10.06□□□□□ -0.8
RNU6-1059P-201ENST00000363752 ZBTB22O15209 634 aa9.99□□□□□ -0.81
RNU6-1059P-201ENST00000363752 ATXN8OSP0DMR3 200 aa9.97□□□□□ -0.81
RNU6-1059P-201ENST00000363752 ABCB7O75027 752 aa9.95□□□□□ -0.82
RNU6-1059P-201ENST00000363752 POLA2Q14181 598 aa9.86□□□□□ -0.83
RNU6-1059P-201ENST00000363752 ZBTB12Q9Y330 459 aaPredicted RBP9.85□□□□□ -0.83
RNU6-1059P-201ENST00000363752 EHMT2Q96KQ7 1210 aa9.84□□□□□ -0.83
RNU6-1059P-201ENST00000363752 ATF5Q9Y2D1 282 aaPredicted RBP9.81□□□□□ -0.84
RNU6-1059P-201ENST00000363752 CSRNP3Q8WYN3 585 aa9.79□□□□□ -0.84
RNU6-1059P-201ENST00000363752 RBM42Q9BTD8 480 aaKnown RBP9.76□□□□□ -0.85
RNU6-1059P-201ENST00000363752 FBLN2P98095 1184 aa9.67□□□□□ -0.86
RNU6-1059P-201ENST00000363752 OSCARQ8IYS5 282 aa9.53□□□□□ -0.88
RNU6-1059P-201ENST00000363752 AKT1S1Q96B36 256 aa9.52□□□□□ -0.89
RNU6-1059P-201ENST00000363752 SPDYE2BA6NHP3 402 aa9.49□□□□□ -0.89
RNU6-1059P-201ENST00000363752 SPDYE6P0CI01 402 aa9.49□□□□□ -0.89
RNU6-1059P-201ENST00000363752 SPDYE2Q495Y8 402 aa9.49□□□□□ -0.89
RNU6-1059P-201ENST00000363752 MKRN4PQ13434 485 aaPredicted RBP9.41□□□□□ -0.9
RNU6-1059P-201ENST00000363752 ZNF692Q9BU19 519 aaPredicted RBP9.38□□□□□ -0.91
RNU6-1059P-201ENST00000363752 REM2Q8IYK8 340 aaPredicted RBP9.36□□□□□ -0.91
RNU6-1059P-201ENST00000363752 CHRDL2Q6WN34 429 aa9.34□□□□□ -0.91
RNU6-1059P-201ENST00000363752 POTEHQ6S545 545 aa9.32□□□□□ -0.92
RNU6-1059P-201ENST00000363752 SSUH2Q9Y2M2 353 aa9.31□□□□□ -0.92
RNU6-1059P-201ENST00000363752 SPDYE1Q8NFV5 336 aaPredicted RBP9.29□□□□□ -0.92
RNU6-1059P-201ENST00000363752 PITPNM1O00562 1244 aa9.23□□□□□ -0.93
RNU6-1059P-201ENST00000363752 PABPN1Q86U42 306 aaKnown RBP eCLIP9.22□□□□□ -0.93
RNU6-1059P-201ENST00000363752 SPDYE4A6NLX3 237 aa9.2□□□□□ -0.94
RNU6-1059P-201ENST00000363752 CLEC11AQ9Y240 323 aa9.2□□□□□ -0.94
RNU6-1059P-201ENST00000363752 STAG3Q9UJ98 1225 aa9.14□□□□□ -0.95
RNU6-1059P-201ENST00000363752 PIP4P2Q8N4L2 257 aa9.13□□□□□ -0.95
RNU6-1059P-201ENST00000363752 FXR2P51116 673 aaKnown RBP eCLIP9.12□□□□□ -0.95
RNU6-1059P-201ENST00000363752 PRR29P0C7W0 189 aa9.11□□□□□ -0.95
RNU6-1059P-201ENST00000363752 PRKAR2AP13861 404 aaKnown RBP9.04□□□□□ -0.96
RNU6-1059P-201ENST00000363752 HAX1O00165 279 aa8.96□□□□□ -0.98
RNU6-1059P-201ENST00000363752 FKBP8Q14318 412 aa8.95□□□□□ -0.98
RNU6-1059P-201ENST00000363752 PROM2Q8N271 834 aa8.95□□□□□ -0.98
RNU6-1059P-201ENST00000363752 PLEKHG5O94827 1062 aa8.91□□□□□ -0.98
RNU6-1059P-201ENST00000363752 CHADLQ6NUI6 762 aa8.9□□□□□ -0.98
RNU6-1059P-201ENST00000363752 FARP1Q9Y4F1 1045 aaPredicted RBP8.87□□□□□ -0.99
RNU6-1059P-201ENST00000363752 NPM1P06748 294 aaKnown RBP eCLIP8.85□□□□□ -0.99
RNU6-1059P-201ENST00000363752 SP7Q8TDD2 431 aaPredicted RBP8.85□□□□□ -0.99
RNU6-1059P-201ENST00000363752 CREBZFQ9NS37 354 aa8.84□□□□□ -0.99
RNU6-1059P-201ENST00000363752 FBXO3Q9UK99 471 aa8.84□□□□□ -0.99
RNU6-1059P-201ENST00000363752 C19orf67A6NJJ6 358 aa8.82□□□□□ -1
RNU6-1059P-201ENST00000363752 PAK3O75914 559 aaPredicted RBP8.8□□□□□ -1
RNU6-1059P-201ENST00000363752 CD44P16070 742 aaKnown RBP8.78□□□□□ -1
RNU6-1059P-201ENST00000363752 MIER1Q8N108 512 aa8.78□□□□□ -1
RNU6-1059P-201ENST00000363752 ZBTB47Q9UFB7 747 aaPredicted RBP8.78□□□□□ -1
RNU6-1059P-201ENST00000363752 CLCN6P51797 869 aa8.77□□□□□ -1.01
RNU6-1059P-201ENST00000363752 PLCD3Q8N3E9 789 aa8.77□□□□□ -1.01
RNU6-1059P-201ENST00000363752 ZRANB1Q9UGI0 708 aa8.69□□□□□ -1.02
RNU6-1059P-201ENST00000363752 EVX2Q03828 476 aa8.68□□□□□ -1.02
RNU6-1059P-201ENST00000363752 MNX1P50219 401 aaPredicted RBP8.67□□□□□ -1.02
RNU6-1059P-201ENST00000363752 ZNF579Q8NAF0 562 aaKnown RBP8.65□□□□□ -1.02
RNU6-1059P-201ENST00000363752 GABBR2O75899 941 aa8.62□□□□□ -1.03
RNU6-1059P-201ENST00000363752 VASPP50552 380 aaPredicted RBP8.61□□□□□ -1.03
RNU6-1059P-201ENST00000363752 KLHL34Q8N239 644 aa8.58□□□□□ -1.04
RNU6-1059P-201ENST00000363752 TSPYL2Q9H2G4 693 aaPredicted RBP8.58□□□□□ -1.04
RNU6-1059P-201ENST00000363752 FAM212AQ96EL1 285 aa8.57□□□□□ -1.04
RNU6-1059P-201ENST00000363752 DCBLD2Q96PD2 775 aa8.54□□□□□ -1.04
RNU6-1059P-201ENST00000363752 PHF12Q96QT6 1004 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms