RNA–Protein interactions for RNA: ENST00000363305.1

RNU6-1309P-201, Transcript of RNA, U6 small nuclear 1309, pseudogene, humanhuman

BASIC

Gene RNU6-1309P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1309P-201ENST00000363305 AEBP2Q6ZN18 517 aaPredicted RBP22.27■■□□□ 1.16
RNU6-1309P-201ENST00000363305 CHIC1Q5VXU3 224 aa20.94■□□□□ 0.94
RNU6-1309P-201ENST00000363305 SENP3Q9H4L4 574 aaPredicted RBP19.14■□□□□ 0.65
RNU6-1309P-201ENST00000363305 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
RNU6-1309P-201ENST00000363305 FOXD1Q16676 465 aa17.8■□□□□ 0.44
RNU6-1309P-201ENST00000363305 MSH5O43196 834 aa16.85■□□□□ 0.29
RNU6-1309P-201ENST00000363305 POTEDQ86YR6 584 aa16.84■□□□□ 0.29
RNU6-1309P-201ENST00000363305 PLPPR3Q6T4P5 718 aa16.64■□□□□ 0.25
RNU6-1309P-201ENST00000363305 PIAS4Q8N2W9 510 aaPredicted RBP16.6■□□□□ 0.25
RNU6-1309P-201ENST00000363305 PPP6R1Q9UPN7 881 aa16.38■□□□□ 0.21
RNU6-1309P-201ENST00000363305 ADRA2BP18089 450 aa16.32■□□□□ 0.2
RNU6-1309P-201ENST00000363305 DMRT2Q9Y5R5 561 aa15.12■□□□□ 0.01
RNU6-1309P-201ENST00000363305 MAPK8IP2Q13387 824 aaPredicted RBP15.06■□□□□ 0
RNU6-1309P-201ENST00000363305 SCAF1Q9H7N4 1312 aaKnown RBP15.05■□□□□ -0
RNU6-1309P-201ENST00000363305 CACNB1Q02641 598 aaPredicted RBP14.57□□□□□ -0.08
RNU6-1309P-201ENST00000363305 PPP4R3CPQ6ZMV5 832 aa14.5□□□□□ -0.09
RNU6-1309P-201ENST00000363305 DCAF8L1A6NGE4 600 aa14.47□□□□□ -0.09
RNU6-1309P-201ENST00000363305 HOXD11P31277 338 aaPredicted RBP14.45□□□□□ -0.1
RNU6-1309P-201ENST00000363305 CNKSR2Q8WXI2 1034 aa14.33□□□□□ -0.12
RNU6-1309P-201ENST00000363305 RNF39Q9H2S5 420 aa14.31□□□□□ -0.12
RNU6-1309P-201ENST00000363305 RNF216Q9NWF9 866 aaPredicted RBP14.28□□□□□ -0.12
RNU6-1309P-201ENST00000363305 C1QBPQ07021 282 aaKnown RBP14.12□□□□□ -0.15
RNU6-1309P-201ENST00000363305 DNAJC5BQ9UF47 199 aa14.08□□□□□ -0.16
RNU6-1309P-201ENST00000363305 NCBP3Q53F19 620 aaKnown RBP13.92□□□□□ -0.18
RNU6-1309P-201ENST00000363305 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.75□□□□□ -0.21
RNU6-1309P-201ENST00000363305 NPM3O75607 178 aaKnown RBP13.66□□□□□ -0.22
RNU6-1309P-201ENST00000363305 U3KPZ7 1027 aaPredicted RBP13.42□□□□□ -0.26
RNU6-1309P-201ENST00000363305 CAPN15O75808 1086 aa13.3□□□□□ -0.28
RNU6-1309P-201ENST00000363305 DSG3P32926 999 aa13.29□□□□□ -0.28
RNU6-1309P-201ENST00000363305 SPINK5Q9NQ38 1064 aaPredicted RBP13.28□□□□□ -0.28
RNU6-1309P-201ENST00000363305 POTEHQ6S545 545 aa13.16□□□□□ -0.3
RNU6-1309P-201ENST00000363305 KCNA4P22459 653 aa13.13□□□□□ -0.31
RNU6-1309P-201ENST00000363305 APLP2Q06481 763 aa13.13□□□□□ -0.31
RNU6-1309P-201ENST00000363305 SLC4A2P04920 1241 aa13.1□□□□□ -0.31
RNU6-1309P-201ENST00000363305 ZNF219Q9P2Y4 722 aaPredicted RBP13.04□□□□□ -0.32
RNU6-1309P-201ENST00000363305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.03□□□□□ -0.32
RNU6-1309P-201ENST00000363305 HNRNPUL2Q1KMD3 747 aaKnown RBP13.03□□□□□ -0.32
RNU6-1309P-201ENST00000363305 TRHP20396 242 aaPredicted RBP13□□□□□ -0.33
RNU6-1309P-201ENST00000363305 ABCB7O75027 752 aa12.94□□□□□ -0.34
RNU6-1309P-201ENST00000363305 SAMD1Q6SPF0 538 aaPredicted RBP12.93□□□□□ -0.34
RNU6-1309P-201ENST00000363305 RBM42Q9BTD8 480 aaKnown RBP12.76□□□□□ -0.37
RNU6-1309P-201ENST00000363305 MYCNP04198 464 aaPredicted RBP12.69□□□□□ -0.38
RNU6-1309P-201ENST00000363305 POLA2Q14181 598 aa12.6□□□□□ -0.39
RNU6-1309P-201ENST00000363305 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
RNU6-1309P-201ENST00000363305 ZBTB12Q9Y330 459 aaPredicted RBP12.42□□□□□ -0.42
RNU6-1309P-201ENST00000363305 FOXD4L1Q9NU39 408 aa12.4□□□□□ -0.42
RNU6-1309P-201ENST00000363305 AKT1S1Q96B36 256 aa12.38□□□□□ -0.43
RNU6-1309P-201ENST00000363305 SLC4A1APQ9BWU0 796 aaKnown RBP12.37□□□□□ -0.43
RNU6-1309P-201ENST00000363305 ATF5Q9Y2D1 282 aaPredicted RBP12.32□□□□□ -0.44
RNU6-1309P-201ENST00000363305 REM2Q8IYK8 340 aaPredicted RBP12.23□□□□□ -0.45
RNU6-1309P-201ENST00000363305 OSCARQ8IYS5 282 aa12.22□□□□□ -0.45
RNU6-1309P-201ENST00000363305 SP7Q8TDD2 431 aaPredicted RBP12.22□□□□□ -0.45
RNU6-1309P-201ENST00000363305 PIP4P2Q8N4L2 257 aa12.16□□□□□ -0.46
RNU6-1309P-201ENST00000363305 PITPNM1O00562 1244 aa12.1□□□□□ -0.47
RNU6-1309P-201ENST00000363305 ATXN8OSP0DMR3 200 aa12.07□□□□□ -0.48
RNU6-1309P-201ENST00000363305 FXR2P51116 673 aaKnown RBP eCLIP12.06□□□□□ -0.48
RNU6-1309P-201ENST00000363305 ZBTB22O15209 634 aa12.05□□□□□ -0.48
RNU6-1309P-201ENST00000363305 HAX1O00165 279 aa12.01□□□□□ -0.49
RNU6-1309P-201ENST00000363305 SPDYE2BA6NHP3 402 aa11.98□□□□□ -0.49
RNU6-1309P-201ENST00000363305 SPDYE6P0CI01 402 aa11.98□□□□□ -0.49
RNU6-1309P-201ENST00000363305 SPDYE2Q495Y8 402 aa11.98□□□□□ -0.49
RNU6-1309P-201ENST00000363305 FBLN2P98095 1184 aa11.96□□□□□ -0.49
RNU6-1309P-201ENST00000363305 SPDYE1Q8NFV5 336 aaPredicted RBP11.84□□□□□ -0.51
RNU6-1309P-201ENST00000363305 PRKAR2AP13861 404 aaKnown RBP11.78□□□□□ -0.52
RNU6-1309P-201ENST00000363305 EVX2Q03828 476 aa11.78□□□□□ -0.52
RNU6-1309P-201ENST00000363305 MKRN4PQ13434 485 aaPredicted RBP11.77□□□□□ -0.53
RNU6-1309P-201ENST00000363305 CLEC11AQ9Y240 323 aa11.77□□□□□ -0.53
RNU6-1309P-201ENST00000363305 SSUH2Q9Y2M2 353 aa11.77□□□□□ -0.53
RNU6-1309P-201ENST00000363305 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
RNU6-1309P-201ENST00000363305 C19orf67A6NJJ6 358 aa11.69□□□□□ -0.54
RNU6-1309P-201ENST00000363305 GABBR2O75899 941 aa11.56□□□□□ -0.56
RNU6-1309P-201ENST00000363305 PRR29P0C7W0 189 aa11.56□□□□□ -0.56
RNU6-1309P-201ENST00000363305 PABPN1Q86U42 306 aaKnown RBP eCLIP11.56□□□□□ -0.56
RNU6-1309P-201ENST00000363305 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
RNU6-1309P-201ENST00000363305 LHX8Q68G74 356 aa11.44□□□□□ -0.58
RNU6-1309P-201ENST00000363305 CD44P16070 742 aaKnown RBP11.41□□□□□ -0.58
RNU6-1309P-201ENST00000363305 FARP1Q9Y4F1 1045 aaPredicted RBP11.4□□□□□ -0.58
RNU6-1309P-201ENST00000363305 CLCN6P51797 869 aa11.39□□□□□ -0.59
RNU6-1309P-201ENST00000363305 POTEIP0CG38 1075 aa11.28□□□□□ -0.6
RNU6-1309P-201ENST00000363305 CSRNP3Q8WYN3 585 aa11.25□□□□□ -0.61
RNU6-1309P-201ENST00000363305 STAG3Q9UJ98 1225 aa11.25□□□□□ -0.61
RNU6-1309P-201ENST00000363305 ZNF579Q8NAF0 562 aaKnown RBP11.24□□□□□ -0.61
RNU6-1309P-201ENST00000363305 DCBLD2Q96PD2 775 aa11.22□□□□□ -0.61
RNU6-1309P-201ENST00000363305 CREBZFQ9NS37 354 aa11.19□□□□□ -0.62
RNU6-1309P-201ENST00000363305 ZRANB1Q9UGI0 708 aa11.19□□□□□ -0.62
RNU6-1309P-201ENST00000363305 SPDYE4A6NLX3 237 aa11.1□□□□□ -0.63
RNU6-1309P-201ENST00000363305 PAK3O75914 559 aaPredicted RBP11.1□□□□□ -0.63
RNU6-1309P-201ENST00000363305 GALR2O43603 387 aaPredicted RBP11.07□□□□□ -0.64
RNU6-1309P-201ENST00000363305 NPM1P06748 294 aaKnown RBP eCLIP11.03□□□□□ -0.64
RNU6-1309P-201ENST00000363305 PHF12Q96QT6 1004 aa10.99□□□□□ -0.65
RNU6-1309P-201ENST00000363305 MNX1P50219 401 aaPredicted RBP10.96□□□□□ -0.65
RNU6-1309P-201ENST00000363305 EHMT2Q96KQ7 1210 aa10.95□□□□□ -0.66
RNU6-1309P-201ENST00000363305 OTUD5Q96G74 571 aa10.94□□□□□ -0.66
RNU6-1309P-201ENST00000363305 PLSCR2Q9NRY7 297 aa10.91□□□□□ -0.66
RNU6-1309P-201ENST00000363305 POTEB2H3BUK9 544 aa10.89□□□□□ -0.67
RNU6-1309P-201ENST00000363305 ASTLQ6HA08 431 aaPredicted RBP10.86□□□□□ -0.67
RNU6-1309P-201ENST00000363305 PELP1Q8IZL8 1130 aaKnown RBP10.85□□□□□ -0.67
RNU6-1309P-201ENST00000363305 MS4A3Q96HJ5 214 aa10.85□□□□□ -0.67
RNU6-1309P-201ENST00000363305 SLC39A7Q92504 469 aa10.83□□□□□ -0.68
RNU6-1309P-201ENST00000363305 METRNQ9UJH8 293 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms