RNA–Protein interactions for RNA: ENST00000363074.1

RNU6-653P-201, Transcript of RNA, U6 small nuclear 653, pseudogene, humanhuman

BASIC

Gene RNU6-653P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-653P-201ENST00000363074 AEBP2Q6ZN18 517 aaPredicted RBP15.41■□□□□ 0.06
RNU6-653P-201ENST00000363074 CHIC1Q5VXU3 224 aa14.5□□□□□ -0.09
RNU6-653P-201ENST00000363074 SENP3Q9H4L4 574 aaPredicted RBP13.17□□□□□ -0.3
RNU6-653P-201ENST00000363074 PHF23Q9BUL5 403 aaPredicted RBP13□□□□□ -0.33
RNU6-653P-201ENST00000363074 FOXD1Q16676 465 aa12.3□□□□□ -0.44
RNU6-653P-201ENST00000363074 MSH5O43196 834 aa11.55□□□□□ -0.56
RNU6-653P-201ENST00000363074 PLPPR3Q6T4P5 718 aa11.55□□□□□ -0.56
RNU6-653P-201ENST00000363074 POTEDQ86YR6 584 aa11.51□□□□□ -0.57
RNU6-653P-201ENST00000363074 PIAS4Q8N2W9 510 aaPredicted RBP11.5□□□□□ -0.57
RNU6-653P-201ENST00000363074 PPP6R1Q9UPN7 881 aa11.4□□□□□ -0.58
RNU6-653P-201ENST00000363074 ADRA2BP18089 450 aa11.38□□□□□ -0.59
RNU6-653P-201ENST00000363074 MAPK8IP2Q13387 824 aaPredicted RBP10.5□□□□□ -0.73
RNU6-653P-201ENST00000363074 SCAF1Q9H7N4 1312 aaKnown RBP10.41□□□□□ -0.74
RNU6-653P-201ENST00000363074 DMRT2Q9Y5R5 561 aa10.4□□□□□ -0.74
RNU6-653P-201ENST00000363074 DCAF8L1A6NGE4 600 aa10.12□□□□□ -0.79
RNU6-653P-201ENST00000363074 PPP4R3CPQ6ZMV5 832 aa10.12□□□□□ -0.79
RNU6-653P-201ENST00000363074 CACNB1Q02641 598 aaPredicted RBP10.06□□□□□ -0.8
RNU6-653P-201ENST00000363074 HOXD11P31277 338 aaPredicted RBP9.95□□□□□ -0.82
RNU6-653P-201ENST00000363074 CNKSR2Q8WXI2 1034 aa9.94□□□□□ -0.82
RNU6-653P-201ENST00000363074 RNF216Q9NWF9 866 aaPredicted RBP9.86□□□□□ -0.83
RNU6-653P-201ENST00000363074 RNF39Q9H2S5 420 aa9.83□□□□□ -0.84
RNU6-653P-201ENST00000363074 NCBP3Q53F19 620 aaKnown RBP9.7□□□□□ -0.86
RNU6-653P-201ENST00000363074 C1QBPQ07021 282 aaKnown RBP9.68□□□□□ -0.86
RNU6-653P-201ENST00000363074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.58□□□□□ -0.88
RNU6-653P-201ENST00000363074 DNAJC5BQ9UF47 199 aa9.58□□□□□ -0.88
RNU6-653P-201ENST00000363074 NPM3O75607 178 aaKnown RBP9.54□□□□□ -0.88
RNU6-653P-201ENST00000363074 U3KPZ7 1027 aaPredicted RBP9.3□□□□□ -0.92
RNU6-653P-201ENST00000363074 CAPN15O75808 1086 aa9.27□□□□□ -0.93
RNU6-653P-201ENST00000363074 KCNA4P22459 653 aa9.26□□□□□ -0.93
RNU6-653P-201ENST00000363074 SPINK5Q9NQ38 1064 aaPredicted RBP9.24□□□□□ -0.93
RNU6-653P-201ENST00000363074 DSG3P32926 999 aa9.18□□□□□ -0.94
RNU6-653P-201ENST00000363074 SLC4A2P04920 1241 aa9.12□□□□□ -0.95
RNU6-653P-201ENST00000363074 TRHP20396 242 aaPredicted RBP9.1□□□□□ -0.95
RNU6-653P-201ENST00000363074 ABCB7O75027 752 aa9.05□□□□□ -0.96
RNU6-653P-201ENST00000363074 APLP2Q06481 763 aa9.05□□□□□ -0.96
RNU6-653P-201ENST00000363074 ZNF219Q9P2Y4 722 aaPredicted RBP9.02□□□□□ -0.97
RNU6-653P-201ENST00000363074 POTEHQ6S545 545 aa9.01□□□□□ -0.97
RNU6-653P-201ENST00000363074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9□□□□□ -0.97
RNU6-653P-201ENST00000363074 HNRNPUL2Q1KMD3 747 aaKnown RBP9□□□□□ -0.97
RNU6-653P-201ENST00000363074 SAMD1Q6SPF0 538 aaPredicted RBP8.95□□□□□ -0.98
RNU6-653P-201ENST00000363074 MYCNP04198 464 aaPredicted RBP8.83□□□□□ -1
RNU6-653P-201ENST00000363074 POLA2Q14181 598 aa8.78□□□□□ -1
RNU6-653P-201ENST00000363074 RBM42Q9BTD8 480 aaKnown RBP8.78□□□□□ -1
RNU6-653P-201ENST00000363074 SLC4A1APQ9BWU0 796 aaKnown RBP8.73□□□□□ -1.01
RNU6-653P-201ENST00000363074 FOXD4L1Q9NU39 408 aa8.67□□□□□ -1.02
RNU6-653P-201ENST00000363074 ATF5Q9Y2D1 282 aaPredicted RBP8.65□□□□□ -1.02
RNU6-653P-201ENST00000363074 CHRDL2Q6WN34 429 aa8.64□□□□□ -1.03
RNU6-653P-201ENST00000363074 ZBTB12Q9Y330 459 aaPredicted RBP8.57□□□□□ -1.04
RNU6-653P-201ENST00000363074 AKT1S1Q96B36 256 aa8.53□□□□□ -1.04
RNU6-653P-201ENST00000363074 OSCARQ8IYS5 282 aa8.52□□□□□ -1.05
RNU6-653P-201ENST00000363074 ZBTB22O15209 634 aa8.49□□□□□ -1.05
RNU6-653P-201ENST00000363074 REM2Q8IYK8 340 aaPredicted RBP8.47□□□□□ -1.05
RNU6-653P-201ENST00000363074 PIP4P2Q8N4L2 257 aa8.4□□□□□ -1.06
RNU6-653P-201ENST00000363074 PITPNM1O00562 1244 aa8.38□□□□□ -1.07
RNU6-653P-201ENST00000363074 SP7Q8TDD2 431 aaPredicted RBP8.38□□□□□ -1.07
RNU6-653P-201ENST00000363074 ATXN8OSP0DMR3 200 aa8.37□□□□□ -1.07
RNU6-653P-201ENST00000363074 HAX1O00165 279 aa8.34□□□□□ -1.07
RNU6-653P-201ENST00000363074 FBLN2P98095 1184 aa8.34□□□□□ -1.07
RNU6-653P-201ENST00000363074 SPDYE2BA6NHP3 402 aa8.3□□□□□ -1.08
RNU6-653P-201ENST00000363074 SPDYE6P0CI01 402 aa8.3□□□□□ -1.08
RNU6-653P-201ENST00000363074 FXR2P51116 673 aaKnown RBP eCLIP8.3□□□□□ -1.08
RNU6-653P-201ENST00000363074 SPDYE2Q495Y8 402 aa8.3□□□□□ -1.08
RNU6-653P-201ENST00000363074 CLEC11AQ9Y240 323 aa8.26□□□□□ -1.09
RNU6-653P-201ENST00000363074 MKRN4PQ13434 485 aaPredicted RBP8.22□□□□□ -1.09
RNU6-653P-201ENST00000363074 ZNF692Q9BU19 519 aaPredicted RBP8.22□□□□□ -1.09
RNU6-653P-201ENST00000363074 PRKAR2AP13861 404 aaKnown RBP8.19□□□□□ -1.1
RNU6-653P-201ENST00000363074 SPDYE1Q8NFV5 336 aaPredicted RBP8.19□□□□□ -1.1
RNU6-653P-201ENST00000363074 EVX2Q03828 476 aa8.17□□□□□ -1.1
RNU6-653P-201ENST00000363074 SSUH2Q9Y2M2 353 aa8.14□□□□□ -1.11
RNU6-653P-201ENST00000363074 CHADLQ6NUI6 762 aa8.1□□□□□ -1.11
RNU6-653P-201ENST00000363074 PABPN1Q86U42 306 aaKnown RBP eCLIP8.09□□□□□ -1.11
RNU6-653P-201ENST00000363074 PRR29P0C7W0 189 aa8.07□□□□□ -1.12
RNU6-653P-201ENST00000363074 C19orf67A6NJJ6 358 aa8.04□□□□□ -1.12
RNU6-653P-201ENST00000363074 GABBR2O75899 941 aa7.99□□□□□ -1.13
RNU6-653P-201ENST00000363074 CSRNP3Q8WYN3 585 aa7.98□□□□□ -1.13
RNU6-653P-201ENST00000363074 CD44P16070 742 aaKnown RBP7.92□□□□□ -1.14
RNU6-653P-201ENST00000363074 FARP1Q9Y4F1 1045 aaPredicted RBP7.91□□□□□ -1.14
RNU6-653P-201ENST00000363074 EHMT2Q96KQ7 1210 aa7.9□□□□□ -1.14
RNU6-653P-201ENST00000363074 LHX8Q68G74 356 aa7.87□□□□□ -1.15
RNU6-653P-201ENST00000363074 STAG3Q9UJ98 1225 aa7.82□□□□□ -1.16
RNU6-653P-201ENST00000363074 SPDYE4A6NLX3 237 aa7.8□□□□□ -1.16
RNU6-653P-201ENST00000363074 ZRANB1Q9UGI0 708 aa7.8□□□□□ -1.16
RNU6-653P-201ENST00000363074 POTEIP0CG38 1075 aa7.79□□□□□ -1.16
RNU6-653P-201ENST00000363074 DCBLD2Q96PD2 775 aa7.79□□□□□ -1.16
RNU6-653P-201ENST00000363074 CREBZFQ9NS37 354 aa7.79□□□□□ -1.16
RNU6-653P-201ENST00000363074 CLCN6P51797 869 aa7.76□□□□□ -1.17
RNU6-653P-201ENST00000363074 ZNF579Q8NAF0 562 aaKnown RBP7.75□□□□□ -1.17
RNU6-653P-201ENST00000363074 PAK3O75914 559 aaPredicted RBP7.72□□□□□ -1.17
RNU6-653P-201ENST00000363074 GALR2O43603 387 aaPredicted RBP7.7□□□□□ -1.18
RNU6-653P-201ENST00000363074 NPM1P06748 294 aaKnown RBP eCLIP7.68□□□□□ -1.18
RNU6-653P-201ENST00000363074 PHF12Q96QT6 1004 aa7.68□□□□□ -1.18
RNU6-653P-201ENST00000363074 MNX1P50219 401 aaPredicted RBP7.61□□□□□ -1.19
RNU6-653P-201ENST00000363074 TSPYL2Q9H2G4 693 aaPredicted RBP7.58□□□□□ -1.2
RNU6-653P-201ENST00000363074 MS4A3Q96HJ5 214 aa7.56□□□□□ -1.2
RNU6-653P-201ENST00000363074 POTEB2H3BUK9 544 aa7.55□□□□□ -1.2
RNU6-653P-201ENST00000363074 PLSCR2Q9NRY7 297 aa7.55□□□□□ -1.2
RNU6-653P-201ENST00000363074 PELP1Q8IZL8 1130 aaKnown RBP7.54□□□□□ -1.2
RNU6-653P-201ENST00000363074 OTUD5Q96G74 571 aa7.54□□□□□ -1.2
RNU6-653P-201ENST00000363074 METRNQ9UJH8 293 aa7.51□□□□□ -1.21
RNU6-653P-201ENST00000363074 PLEKHG5O94827 1062 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms