RNA–Protein interactions for RNA: ENST00000363054.1

RNU6-1252P-201, Transcript of RNA, U6 small nuclear 1252, pseudogene, humanhuman

BASIC

Gene RNU6-1252P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1252P-201ENST00000363054 AEBP2Q6ZN18 517 aaPredicted RBP18.02■□□□□ 0.48
RNU6-1252P-201ENST00000363054 CHIC1Q5VXU3 224 aa17.56■□□□□ 0.4
RNU6-1252P-201ENST00000363054 SENP3Q9H4L4 574 aaPredicted RBP15.56■□□□□ 0.08
RNU6-1252P-201ENST00000363054 PHF23Q9BUL5 403 aaPredicted RBP15.29■□□□□ 0.04
RNU6-1252P-201ENST00000363054 FOXD1Q16676 465 aa14.3□□□□□ -0.12
RNU6-1252P-201ENST00000363054 PLPPR3Q6T4P5 718 aa14.25□□□□□ -0.13
RNU6-1252P-201ENST00000363054 PPP6R1Q9UPN7 881 aa13.52□□□□□ -0.25
RNU6-1252P-201ENST00000363054 ADRA2BP18089 450 aa13.51□□□□□ -0.25
RNU6-1252P-201ENST00000363054 PIAS4Q8N2W9 510 aaPredicted RBP13.49□□□□□ -0.25
RNU6-1252P-201ENST00000363054 MSH5O43196 834 aa13.47□□□□□ -0.25
RNU6-1252P-201ENST00000363054 SCAF1Q9H7N4 1312 aaKnown RBP12.65□□□□□ -0.38
RNU6-1252P-201ENST00000363054 POTEDQ86YR6 584 aa12.45□□□□□ -0.42
RNU6-1252P-201ENST00000363054 PPP4R3CPQ6ZMV5 832 aa12.43□□□□□ -0.42
RNU6-1252P-201ENST00000363054 DMRT2Q9Y5R5 561 aa12.33□□□□□ -0.44
RNU6-1252P-201ENST00000363054 MAPK8IP2Q13387 824 aaPredicted RBP12.27□□□□□ -0.45
RNU6-1252P-201ENST00000363054 CNKSR2Q8WXI2 1034 aa12.22□□□□□ -0.45
RNU6-1252P-201ENST00000363054 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.45
RNU6-1252P-201ENST00000363054 RNF216Q9NWF9 866 aaPredicted RBP12.03□□□□□ -0.48
RNU6-1252P-201ENST00000363054 HOXD11P31277 338 aaPredicted RBP12.01□□□□□ -0.49
RNU6-1252P-201ENST00000363054 NPM3O75607 178 aaKnown RBP11.85□□□□□ -0.51
RNU6-1252P-201ENST00000363054 KCNA4P22459 653 aa11.83□□□□□ -0.52
RNU6-1252P-201ENST00000363054 DCAF8L1A6NGE4 600 aa11.74□□□□□ -0.53
RNU6-1252P-201ENST00000363054 DNAJC5BQ9UF47 199 aa11.74□□□□□ -0.53
RNU6-1252P-201ENST00000363054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.44□□□□□ -0.58
RNU6-1252P-201ENST00000363054 RNF39Q9H2S5 420 aa11.42□□□□□ -0.58
RNU6-1252P-201ENST00000363054 C1QBPQ07021 282 aaKnown RBP11.37□□□□□ -0.59
RNU6-1252P-201ENST00000363054 SLC4A1APQ9BWU0 796 aaKnown RBP11.32□□□□□ -0.6
RNU6-1252P-201ENST00000363054 CACNB1Q02641 598 aaPredicted RBP11.27□□□□□ -0.61
RNU6-1252P-201ENST00000363054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.19□□□□□ -0.62
RNU6-1252P-201ENST00000363054 SLC4A2P04920 1241 aa11.19□□□□□ -0.62
RNU6-1252P-201ENST00000363054 HNRNPUL2Q1KMD3 747 aaKnown RBP11.19□□□□□ -0.62
RNU6-1252P-201ENST00000363054 APLP2Q06481 763 aa11.17□□□□□ -0.62
RNU6-1252P-201ENST00000363054 U3KPZ7 1027 aaPredicted RBP11.15□□□□□ -0.62
RNU6-1252P-201ENST00000363054 SAMD1Q6SPF0 538 aaPredicted RBP11.08□□□□□ -0.64
RNU6-1252P-201ENST00000363054 FOXD4L1Q9NU39 408 aa11.08□□□□□ -0.64
RNU6-1252P-201ENST00000363054 MYCNP04198 464 aaPredicted RBP11.06□□□□□ -0.64
RNU6-1252P-201ENST00000363054 ZNF219Q9P2Y4 722 aaPredicted RBP10.93□□□□□ -0.66
RNU6-1252P-201ENST00000363054 CAPN15O75808 1086 aa10.91□□□□□ -0.66
RNU6-1252P-201ENST00000363054 SPINK5Q9NQ38 1064 aaPredicted RBP10.84□□□□□ -0.67
RNU6-1252P-201ENST00000363054 ZBTB22O15209 634 aa10.82□□□□□ -0.68
RNU6-1252P-201ENST00000363054 ATXN8OSP0DMR3 200 aa10.82□□□□□ -0.68
RNU6-1252P-201ENST00000363054 TRHP20396 242 aaPredicted RBP10.77□□□□□ -0.69
RNU6-1252P-201ENST00000363054 DSG3P32926 999 aa10.76□□□□□ -0.69
RNU6-1252P-201ENST00000363054 CSRNP3Q8WYN3 585 aa10.65□□□□□ -0.7
RNU6-1252P-201ENST00000363054 EHMT2Q96KQ7 1210 aa10.64□□□□□ -0.71
RNU6-1252P-201ENST00000363054 ABCB7O75027 752 aa10.59□□□□□ -0.71
RNU6-1252P-201ENST00000363054 ZBTB12Q9Y330 459 aaPredicted RBP10.59□□□□□ -0.71
RNU6-1252P-201ENST00000363054 POLA2Q14181 598 aa10.57□□□□□ -0.72
RNU6-1252P-201ENST00000363054 ATF5Q9Y2D1 282 aaPredicted RBP10.55□□□□□ -0.72
RNU6-1252P-201ENST00000363054 RBM42Q9BTD8 480 aaKnown RBP10.44□□□□□ -0.74
RNU6-1252P-201ENST00000363054 FBLN2P98095 1184 aa10.38□□□□□ -0.75
RNU6-1252P-201ENST00000363054 SPDYE2BA6NHP3 402 aa10.21□□□□□ -0.77
RNU6-1252P-201ENST00000363054 SPDYE6P0CI01 402 aa10.21□□□□□ -0.77
RNU6-1252P-201ENST00000363054 SPDYE2Q495Y8 402 aa10.21□□□□□ -0.77
RNU6-1252P-201ENST00000363054 AKT1S1Q96B36 256 aa10.2□□□□□ -0.78
RNU6-1252P-201ENST00000363054 OSCARQ8IYS5 282 aa10.18□□□□□ -0.78
RNU6-1252P-201ENST00000363054 MKRN4PQ13434 485 aaPredicted RBP10.13□□□□□ -0.79
RNU6-1252P-201ENST00000363054 ZNF692Q9BU19 519 aaPredicted RBP10.06□□□□□ -0.8
RNU6-1252P-201ENST00000363054 SSUH2Q9Y2M2 353 aa10.04□□□□□ -0.8
RNU6-1252P-201ENST00000363054 REM2Q8IYK8 340 aaPredicted RBP10□□□□□ -0.81
RNU6-1252P-201ENST00000363054 CHRDL2Q6WN34 429 aa9.95□□□□□ -0.82
RNU6-1252P-201ENST00000363054 SPDYE1Q8NFV5 336 aaPredicted RBP9.95□□□□□ -0.82
RNU6-1252P-201ENST00000363054 SPDYE4A6NLX3 237 aa9.92□□□□□ -0.82
RNU6-1252P-201ENST00000363054 PABPN1Q86U42 306 aaKnown RBP eCLIP9.88□□□□□ -0.83
RNU6-1252P-201ENST00000363054 PITPNM1O00562 1244 aa9.87□□□□□ -0.83
RNU6-1252P-201ENST00000363054 POTEHQ6S545 545 aa9.86□□□□□ -0.83
RNU6-1252P-201ENST00000363054 STAG3Q9UJ98 1225 aa9.86□□□□□ -0.83
RNU6-1252P-201ENST00000363054 CLEC11AQ9Y240 323 aa9.8□□□□□ -0.84
RNU6-1252P-201ENST00000363054 FXR2P51116 673 aaKnown RBP eCLIP9.78□□□□□ -0.84
RNU6-1252P-201ENST00000363054 PRR29P0C7W0 189 aa9.75□□□□□ -0.85
RNU6-1252P-201ENST00000363054 PROM2Q8N271 834 aa9.75□□□□□ -0.85
RNU6-1252P-201ENST00000363054 PIP4P2Q8N4L2 257 aa9.73□□□□□ -0.85
RNU6-1252P-201ENST00000363054 FKBP8Q14318 412 aa9.67□□□□□ -0.86
RNU6-1252P-201ENST00000363054 PRKAR2AP13861 404 aaKnown RBP9.64□□□□□ -0.87
RNU6-1252P-201ENST00000363054 FBXO3Q9UK99 471 aa9.59□□□□□ -0.87
RNU6-1252P-201ENST00000363054 PLEKHG5O94827 1062 aa9.58□□□□□ -0.88
RNU6-1252P-201ENST00000363054 HAX1O00165 279 aa9.5□□□□□ -0.89
RNU6-1252P-201ENST00000363054 NPM1P06748 294 aaKnown RBP eCLIP9.5□□□□□ -0.89
RNU6-1252P-201ENST00000363054 CHADLQ6NUI6 762 aa9.5□□□□□ -0.89
RNU6-1252P-201ENST00000363054 CREBZFQ9NS37 354 aa9.5□□□□□ -0.89
RNU6-1252P-201ENST00000363054 FARP1Q9Y4F1 1045 aaPredicted RBP9.5□□□□□ -0.89
RNU6-1252P-201ENST00000363054 ZBTB47Q9UFB7 747 aaPredicted RBP9.49□□□□□ -0.89
RNU6-1252P-201ENST00000363054 C19orf67A6NJJ6 358 aa9.44□□□□□ -0.9
RNU6-1252P-201ENST00000363054 CLCN6P51797 869 aa9.44□□□□□ -0.9
RNU6-1252P-201ENST00000363054 MIER1Q8N108 512 aa9.43□□□□□ -0.9
RNU6-1252P-201ENST00000363054 PLCD3Q8N3E9 789 aa9.42□□□□□ -0.9
RNU6-1252P-201ENST00000363054 PAK3O75914 559 aaPredicted RBP9.41□□□□□ -0.9
RNU6-1252P-201ENST00000363054 SP7Q8TDD2 431 aaPredicted RBP9.41□□□□□ -0.9
RNU6-1252P-201ENST00000363054 CD44P16070 742 aaKnown RBP9.37□□□□□ -0.91
RNU6-1252P-201ENST00000363054 MNX1P50219 401 aaPredicted RBP9.37□□□□□ -0.91
RNU6-1252P-201ENST00000363054 VASPP50552 380 aaPredicted RBP9.32□□□□□ -0.92
RNU6-1252P-201ENST00000363054 ZNF579Q8NAF0 562 aaKnown RBP9.28□□□□□ -0.92
RNU6-1252P-201ENST00000363054 ZRANB1Q9UGI0 708 aa9.27□□□□□ -0.93
RNU6-1252P-201ENST00000363054 EVX2Q03828 476 aa9.24□□□□□ -0.93
RNU6-1252P-201ENST00000363054 KLHL34Q8N239 644 aa9.22□□□□□ -0.93
RNU6-1252P-201ENST00000363054 FAM212AQ96EL1 285 aa9.22□□□□□ -0.93
RNU6-1252P-201ENST00000363054 GABBR2O75899 941 aa9.19□□□□□ -0.94
RNU6-1252P-201ENST00000363054 NUBP1P53384 320 aa9.18□□□□□ -0.94
RNU6-1252P-201ENST00000363054 GSE1Q14687 1217 aa9.16□□□□□ -0.94
RNU6-1252P-201ENST00000363054 TSPYL2Q9H2G4 693 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms