RNA–Protein interactions for RNA: ENST00000362802.1

RNU4-21P-201, Transcript of RNA, U4 small nuclear 21, pseudogene, humanhuman

BASIC

Gene RNU4-21P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-21P-201ENST00000362802 AEBP2Q6ZN18 517 aaPredicted RBP22.99■■□□□ 1.27
RNU4-21P-201ENST00000362802 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
RNU4-21P-201ENST00000362802 PHF23Q9BUL5 403 aaPredicted RBP19.59■□□□□ 0.73
RNU4-21P-201ENST00000362802 SENP3Q9H4L4 574 aaPredicted RBP19.58■□□□□ 0.72
RNU4-21P-201ENST00000362802 FOXD1Q16676 465 aa18.18■□□□□ 0.5
RNU4-21P-201ENST00000362802 PLPPR3Q6T4P5 718 aa18.08■□□□□ 0.48
RNU4-21P-201ENST00000362802 ADRA2BP18089 450 aa17.38■□□□□ 0.37
RNU4-21P-201ENST00000362802 PPP6R1Q9UPN7 881 aa17.35■□□□□ 0.37
RNU4-21P-201ENST00000362802 PIAS4Q8N2W9 510 aaPredicted RBP17.16■□□□□ 0.34
RNU4-21P-201ENST00000362802 MSH5O43196 834 aa16.84■□□□□ 0.29
RNU4-21P-201ENST00000362802 PPP4R3CPQ6ZMV5 832 aa15.92■□□□□ 0.14
RNU4-21P-201ENST00000362802 SCAF1Q9H7N4 1312 aaKnown RBP15.92■□□□□ 0.14
RNU4-21P-201ENST00000362802 MAPK8IP2Q13387 824 aaPredicted RBP15.8■□□□□ 0.12
RNU4-21P-201ENST00000362802 POTEDQ86YR6 584 aa15.6■□□□□ 0.09
RNU4-21P-201ENST00000362802 DMRT2Q9Y5R5 561 aa15.58■□□□□ 0.08
RNU4-21P-201ENST00000362802 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
RNU4-21P-201ENST00000362802 NCBP3Q53F19 620 aaKnown RBP15.49■□□□□ 0.07
RNU4-21P-201ENST00000362802 KCNA4P22459 653 aa15.38■□□□□ 0.05
RNU4-21P-201ENST00000362802 NPM3O75607 178 aaKnown RBP15.22■□□□□ 0.03
RNU4-21P-201ENST00000362802 RNF216Q9NWF9 866 aaPredicted RBP15.21■□□□□ 0.03
RNU4-21P-201ENST00000362802 HOXD11P31277 338 aaPredicted RBP15.16■□□□□ 0.02
RNU4-21P-201ENST00000362802 DCAF8L1A6NGE4 600 aa15.05■□□□□ -0
RNU4-21P-201ENST00000362802 DNAJC5BQ9UF47 199 aa14.67□□□□□ -0.06
RNU4-21P-201ENST00000362802 SLC4A1APQ9BWU0 796 aaKnown RBP14.64□□□□□ -0.07
RNU4-21P-201ENST00000362802 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.57□□□□□ -0.08
RNU4-21P-201ENST00000362802 SLC4A2P04920 1241 aa14.38□□□□□ -0.11
RNU4-21P-201ENST00000362802 RNF39Q9H2S5 420 aa14.38□□□□□ -0.11
RNU4-21P-201ENST00000362802 U3KPZ7 1027 aaPredicted RBP14.25□□□□□ -0.13
RNU4-21P-201ENST00000362802 C1QBPQ07021 282 aaKnown RBP14.22□□□□□ -0.13
RNU4-21P-201ENST00000362802 CACNB1Q02641 598 aaPredicted RBP14.2□□□□□ -0.14
RNU4-21P-201ENST00000362802 FOXD4L1Q9NU39 408 aa14.19□□□□□ -0.14
RNU4-21P-201ENST00000362802 ZBTB22O15209 634 aa14.11□□□□□ -0.15
RNU4-21P-201ENST00000362802 EHMT2Q96KQ7 1210 aa14.1□□□□□ -0.15
RNU4-21P-201ENST00000362802 MYCNP04198 464 aaPredicted RBP14.08□□□□□ -0.16
RNU4-21P-201ENST00000362802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.04□□□□□ -0.16
RNU4-21P-201ENST00000362802 HNRNPUL2Q1KMD3 747 aaKnown RBP14.04□□□□□ -0.16
RNU4-21P-201ENST00000362802 SAMD1Q6SPF0 538 aaPredicted RBP13.98□□□□□ -0.17
RNU4-21P-201ENST00000362802 APLP2Q06481 763 aa13.95□□□□□ -0.18
RNU4-21P-201ENST00000362802 CAPN15O75808 1086 aa13.93□□□□□ -0.18
RNU4-21P-201ENST00000362802 CSRNP3Q8WYN3 585 aa13.91□□□□□ -0.18
RNU4-21P-201ENST00000362802 SPINK5Q9NQ38 1064 aaPredicted RBP13.91□□□□□ -0.18
RNU4-21P-201ENST00000362802 TRHP20396 242 aaPredicted RBP13.82□□□□□ -0.2
RNU4-21P-201ENST00000362802 ZNF219Q9P2Y4 722 aaPredicted RBP13.76□□□□□ -0.21
RNU4-21P-201ENST00000362802 ATF5Q9Y2D1 282 aaPredicted RBP13.7□□□□□ -0.22
RNU4-21P-201ENST00000362802 ATXN8OSP0DMR3 200 aa13.68□□□□□ -0.22
RNU4-21P-201ENST00000362802 ABCB7O75027 752 aa13.64□□□□□ -0.23
RNU4-21P-201ENST00000362802 DSG3P32926 999 aa13.64□□□□□ -0.23
RNU4-21P-201ENST00000362802 POLA2Q14181 598 aa13.53□□□□□ -0.24
RNU4-21P-201ENST00000362802 ZBTB12Q9Y330 459 aaPredicted RBP13.28□□□□□ -0.28
RNU4-21P-201ENST00000362802 FBLN2P98095 1184 aa13.2□□□□□ -0.3
RNU4-21P-201ENST00000362802 MKRN4PQ13434 485 aaPredicted RBP13.08□□□□□ -0.32
RNU4-21P-201ENST00000362802 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
RNU4-21P-201ENST00000362802 RBM42Q9BTD8 480 aaKnown RBP13.04□□□□□ -0.32
RNU4-21P-201ENST00000362802 SPDYE2BA6NHP3 402 aa12.9□□□□□ -0.34
RNU4-21P-201ENST00000362802 SPDYE6P0CI01 402 aa12.9□□□□□ -0.34
RNU4-21P-201ENST00000362802 SPDYE2Q495Y8 402 aa12.9□□□□□ -0.34
RNU4-21P-201ENST00000362802 ZNF692Q9BU19 519 aaPredicted RBP12.86□□□□□ -0.35
RNU4-21P-201ENST00000362802 AKT1S1Q96B36 256 aa12.83□□□□□ -0.36
RNU4-21P-201ENST00000362802 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
RNU4-21P-201ENST00000362802 SSUH2Q9Y2M2 353 aa12.74□□□□□ -0.37
RNU4-21P-201ENST00000362802 REM2Q8IYK8 340 aaPredicted RBP12.72□□□□□ -0.37
RNU4-21P-201ENST00000362802 PABPN1Q86U42 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
RNU4-21P-201ENST00000362802 FKBP8Q14318 412 aa12.65□□□□□ -0.38
RNU4-21P-201ENST00000362802 PITPNM1O00562 1244 aa12.58□□□□□ -0.4
RNU4-21P-201ENST00000362802 SPDYE1Q8NFV5 336 aaPredicted RBP12.58□□□□□ -0.4
RNU4-21P-201ENST00000362802 CLEC11AQ9Y240 323 aa12.58□□□□□ -0.4
RNU4-21P-201ENST00000362802 CHRDL2Q6WN34 429 aa12.56□□□□□ -0.4
RNU4-21P-201ENST00000362802 PROM2Q8N271 834 aa12.43□□□□□ -0.42
RNU4-21P-201ENST00000362802 PRR29P0C7W0 189 aa12.42□□□□□ -0.42
RNU4-21P-201ENST00000362802 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
RNU4-21P-201ENST00000362802 PIP4P2Q8N4L2 257 aa12.36□□□□□ -0.43
RNU4-21P-201ENST00000362802 POTEHQ6S545 545 aa12.34□□□□□ -0.43
RNU4-21P-201ENST00000362802 FXR2P51116 673 aaKnown RBP eCLIP12.33□□□□□ -0.44
RNU4-21P-201ENST00000362802 PRKAR2AP13861 404 aaKnown RBP12.28□□□□□ -0.44
RNU4-21P-201ENST00000362802 CHADLQ6NUI6 762 aa12.25□□□□□ -0.45
RNU4-21P-201ENST00000362802 FBXO3Q9UK99 471 aa12.24□□□□□ -0.45
RNU4-21P-201ENST00000362802 MIER1Q8N108 512 aa12.17□□□□□ -0.46
RNU4-21P-201ENST00000362802 CREBZFQ9NS37 354 aa12.16□□□□□ -0.46
RNU4-21P-201ENST00000362802 PLEKHG5O94827 1062 aa12.14□□□□□ -0.47
RNU4-21P-201ENST00000362802 PLCD3Q8N3E9 789 aa12.14□□□□□ -0.47
RNU4-21P-201ENST00000362802 FARP1Q9Y4F1 1045 aaPredicted RBP12.1□□□□□ -0.47
RNU4-21P-201ENST00000362802 HAX1O00165 279 aa12.07□□□□□ -0.48
RNU4-21P-201ENST00000362802 VASPP50552 380 aaPredicted RBP12.06□□□□□ -0.48
RNU4-21P-201ENST00000362802 NPM1P06748 294 aaKnown RBP eCLIP12.01□□□□□ -0.49
RNU4-21P-201ENST00000362802 MNX1P50219 401 aaPredicted RBP11.98□□□□□ -0.49
RNU4-21P-201ENST00000362802 ZBTB47Q9UFB7 747 aaPredicted RBP11.98□□□□□ -0.49
RNU4-21P-201ENST00000362802 KLHL34Q8N239 644 aa11.97□□□□□ -0.49
RNU4-21P-201ENST00000362802 CD44P16070 742 aaKnown RBP11.93□□□□□ -0.5
RNU4-21P-201ENST00000362802 C19orf67A6NJJ6 358 aa11.92□□□□□ -0.5
RNU4-21P-201ENST00000362802 PAK3O75914 559 aaPredicted RBP11.88□□□□□ -0.51
RNU4-21P-201ENST00000362802 EVX2Q03828 476 aa11.87□□□□□ -0.51
RNU4-21P-201ENST00000362802 IFNLR1Q8IU57 520 aaPredicted RBP11.86□□□□□ -0.51
RNU4-21P-201ENST00000362802 ZRANB1Q9UGI0 708 aa11.85□□□□□ -0.51
RNU4-21P-201ENST00000362802 TSPYL2Q9H2G4 693 aaPredicted RBP11.84□□□□□ -0.51
RNU4-21P-201ENST00000362802 RASEFQ8IZ41 740 aa11.8□□□□□ -0.52
RNU4-21P-201ENST00000362802 SP7Q8TDD2 431 aaPredicted RBP11.79□□□□□ -0.52
RNU4-21P-201ENST00000362802 NUBP1P53384 320 aa11.78□□□□□ -0.52
RNU4-21P-201ENST00000362802 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
RNU4-21P-201ENST00000362802 FAM212AQ96EL1 285 aa11.76□□□□□ -0.53
RNU4-21P-201ENST00000362802 DCAF8Q5TAQ9 597 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms