RNA–Protein interactions for RNA: ENST00000362731.1

RNU6-562P-201, Transcript of RNA, U6 small nuclear 562, pseudogene, humanhuman

BASIC

Gene RNU6-562P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-562P-201ENST00000362731 AEBP2Q6ZN18 517 aaPredicted RBP17.56■□□□□ 0.4
RNU6-562P-201ENST00000362731 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
RNU6-562P-201ENST00000362731 PHF23Q9BUL5 403 aaPredicted RBP14.93□□□□□ -0.02
RNU6-562P-201ENST00000362731 SENP3Q9H4L4 574 aaPredicted RBP14.92□□□□□ -0.02
RNU6-562P-201ENST00000362731 FOXD1Q16676 465 aa13.87□□□□□ -0.19
RNU6-562P-201ENST00000362731 PLPPR3Q6T4P5 718 aa13.7□□□□□ -0.22
RNU6-562P-201ENST00000362731 PPP6R1Q9UPN7 881 aa13.21□□□□□ -0.29
RNU6-562P-201ENST00000362731 ADRA2BP18089 450 aa13.18□□□□□ -0.3
RNU6-562P-201ENST00000362731 PIAS4Q8N2W9 510 aaPredicted RBP13.02□□□□□ -0.33
RNU6-562P-201ENST00000362731 MSH5O43196 834 aa12.84□□□□□ -0.35
RNU6-562P-201ENST00000362731 PPP4R3CPQ6ZMV5 832 aa12.06□□□□□ -0.48
RNU6-562P-201ENST00000362731 SCAF1Q9H7N4 1312 aaKnown RBP12.06□□□□□ -0.48
RNU6-562P-201ENST00000362731 MAPK8IP2Q13387 824 aaPredicted RBP12.01□□□□□ -0.49
RNU6-562P-201ENST00000362731 POTEDQ86YR6 584 aa12□□□□□ -0.49
RNU6-562P-201ENST00000362731 DMRT2Q9Y5R5 561 aa11.89□□□□□ -0.51
RNU6-562P-201ENST00000362731 CNKSR2Q8WXI2 1034 aa11.75□□□□□ -0.53
RNU6-562P-201ENST00000362731 NCBP3Q53F19 620 aaKnown RBP11.68□□□□□ -0.54
RNU6-562P-201ENST00000362731 KCNA4P22459 653 aa11.59□□□□□ -0.55
RNU6-562P-201ENST00000362731 HOXD11P31277 338 aaPredicted RBP11.58□□□□□ -0.56
RNU6-562P-201ENST00000362731 RNF216Q9NWF9 866 aaPredicted RBP11.57□□□□□ -0.56
RNU6-562P-201ENST00000362731 NPM3O75607 178 aaKnown RBP11.53□□□□□ -0.56
RNU6-562P-201ENST00000362731 DCAF8L1A6NGE4 600 aa11.33□□□□□ -0.6
RNU6-562P-201ENST00000362731 DNAJC5BQ9UF47 199 aa11.26□□□□□ -0.61
RNU6-562P-201ENST00000362731 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11□□□□□ -0.65
RNU6-562P-201ENST00000362731 RNF39Q9H2S5 420 aa11□□□□□ -0.65
RNU6-562P-201ENST00000362731 SLC4A1APQ9BWU0 796 aaKnown RBP10.99□□□□□ -0.65
RNU6-562P-201ENST00000362731 SLC4A2P04920 1241 aa10.93□□□□□ -0.66
RNU6-562P-201ENST00000362731 C1QBPQ07021 282 aaKnown RBP10.86□□□□□ -0.67
RNU6-562P-201ENST00000362731 U3KPZ7 1027 aaPredicted RBP10.83□□□□□ -0.68
RNU6-562P-201ENST00000362731 CACNB1Q02641 598 aaPredicted RBP10.81□□□□□ -0.68
RNU6-562P-201ENST00000362731 FOXD4L1Q9NU39 408 aa10.7□□□□□ -0.7
RNU6-562P-201ENST00000362731 ZBTB22O15209 634 aa10.67□□□□□ -0.7
RNU6-562P-201ENST00000362731 MYCNP04198 464 aaPredicted RBP10.65□□□□□ -0.7
RNU6-562P-201ENST00000362731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.62□□□□□ -0.71
RNU6-562P-201ENST00000362731 HNRNPUL2Q1KMD3 747 aaKnown RBP10.62□□□□□ -0.71
RNU6-562P-201ENST00000362731 SAMD1Q6SPF0 538 aaPredicted RBP10.58□□□□□ -0.72
RNU6-562P-201ENST00000362731 SPINK5Q9NQ38 1064 aaPredicted RBP10.57□□□□□ -0.72
RNU6-562P-201ENST00000362731 APLP2Q06481 763 aa10.54□□□□□ -0.72
RNU6-562P-201ENST00000362731 CAPN15O75808 1086 aa10.51□□□□□ -0.73
RNU6-562P-201ENST00000362731 EHMT2Q96KQ7 1210 aa10.47□□□□□ -0.73
RNU6-562P-201ENST00000362731 CSRNP3Q8WYN3 585 aa10.46□□□□□ -0.73
RNU6-562P-201ENST00000362731 ZNF219Q9P2Y4 722 aaPredicted RBP10.43□□□□□ -0.74
RNU6-562P-201ENST00000362731 TRHP20396 242 aaPredicted RBP10.42□□□□□ -0.74
RNU6-562P-201ENST00000362731 DSG3P32926 999 aa10.41□□□□□ -0.74
RNU6-562P-201ENST00000362731 ATF5Q9Y2D1 282 aaPredicted RBP10.38□□□□□ -0.75
RNU6-562P-201ENST00000362731 ATXN8OSP0DMR3 200 aa10.36□□□□□ -0.75
RNU6-562P-201ENST00000362731 ABCB7O75027 752 aa10.3□□□□□ -0.76
RNU6-562P-201ENST00000362731 POLA2Q14181 598 aa10.23□□□□□ -0.77
RNU6-562P-201ENST00000362731 ZBTB12Q9Y330 459 aaPredicted RBP10.06□□□□□ -0.8
RNU6-562P-201ENST00000362731 FBLN2P98095 1184 aa9.93□□□□□ -0.82
RNU6-562P-201ENST00000362731 MKRN4PQ13434 485 aaPredicted RBP9.93□□□□□ -0.82
RNU6-562P-201ENST00000362731 RBM42Q9BTD8 480 aaKnown RBP9.91□□□□□ -0.82
RNU6-562P-201ENST00000362731 OSCARQ8IYS5 282 aa9.89□□□□□ -0.83
RNU6-562P-201ENST00000362731 SPDYE2BA6NHP3 402 aa9.78□□□□□ -0.84
RNU6-562P-201ENST00000362731 SPDYE6P0CI01 402 aa9.78□□□□□ -0.84
RNU6-562P-201ENST00000362731 SPDYE2Q495Y8 402 aa9.78□□□□□ -0.84
RNU6-562P-201ENST00000362731 AKT1S1Q96B36 256 aa9.76□□□□□ -0.85
RNU6-562P-201ENST00000362731 SSUH2Q9Y2M2 353 aa9.7□□□□□ -0.86
RNU6-562P-201ENST00000362731 ZNF692Q9BU19 519 aaPredicted RBP9.69□□□□□ -0.86
RNU6-562P-201ENST00000362731 REM2Q8IYK8 340 aaPredicted RBP9.67□□□□□ -0.86
RNU6-562P-201ENST00000362731 SPDYE4A6NLX3 237 aa9.6□□□□□ -0.87
RNU6-562P-201ENST00000362731 CHRDL2Q6WN34 429 aa9.57□□□□□ -0.88
RNU6-562P-201ENST00000362731 PABPN1Q86U42 306 aaKnown RBP eCLIP9.57□□□□□ -0.88
RNU6-562P-201ENST00000362731 PITPNM1O00562 1244 aa9.56□□□□□ -0.88
RNU6-562P-201ENST00000362731 SPDYE1Q8NFV5 336 aaPredicted RBP9.52□□□□□ -0.89
RNU6-562P-201ENST00000362731 POTEHQ6S545 545 aa9.46□□□□□ -0.9
RNU6-562P-201ENST00000362731 PROM2Q8N271 834 aa9.46□□□□□ -0.9
RNU6-562P-201ENST00000362731 CLEC11AQ9Y240 323 aa9.46□□□□□ -0.9
RNU6-562P-201ENST00000362731 FKBP8Q14318 412 aa9.44□□□□□ -0.9
RNU6-562P-201ENST00000362731 FXR2P51116 673 aaKnown RBP eCLIP9.42□□□□□ -0.9
RNU6-562P-201ENST00000362731 PIP4P2Q8N4L2 257 aa9.42□□□□□ -0.9
RNU6-562P-201ENST00000362731 STAG3Q9UJ98 1225 aa9.38□□□□□ -0.91
RNU6-562P-201ENST00000362731 PRR29P0C7W0 189 aa9.36□□□□□ -0.91
RNU6-562P-201ENST00000362731 PRKAR2AP13861 404 aaKnown RBP9.31□□□□□ -0.92
RNU6-562P-201ENST00000362731 CHADLQ6NUI6 762 aa9.26□□□□□ -0.93
RNU6-562P-201ENST00000362731 CREBZFQ9NS37 354 aa9.23□□□□□ -0.93
RNU6-562P-201ENST00000362731 FARP1Q9Y4F1 1045 aaPredicted RBP9.17□□□□□ -0.94
RNU6-562P-201ENST00000362731 FBXO3Q9UK99 471 aa9.16□□□□□ -0.94
RNU6-562P-201ENST00000362731 HAX1O00165 279 aa9.14□□□□□ -0.95
RNU6-562P-201ENST00000362731 MNX1P50219 401 aaPredicted RBP9.13□□□□□ -0.95
RNU6-562P-201ENST00000362731 C19orf67A6NJJ6 358 aa9.11□□□□□ -0.95
RNU6-562P-201ENST00000362731 MIER1Q8N108 512 aa9.11□□□□□ -0.95
RNU6-562P-201ENST00000362731 PLCD3Q8N3E9 789 aa9.08□□□□□ -0.96
RNU6-562P-201ENST00000362731 PLEKHG5O94827 1062 aa9.07□□□□□ -0.96
RNU6-562P-201ENST00000362731 EVX2Q03828 476 aa9.07□□□□□ -0.96
RNU6-562P-201ENST00000362731 NPM1P06748 294 aaKnown RBP eCLIP9.05□□□□□ -0.96
RNU6-562P-201ENST00000362731 VASPP50552 380 aaPredicted RBP9.05□□□□□ -0.96
RNU6-562P-201ENST00000362731 CD44P16070 742 aaKnown RBP9.03□□□□□ -0.96
RNU6-562P-201ENST00000362731 SP7Q8TDD2 431 aaPredicted RBP9.02□□□□□ -0.97
RNU6-562P-201ENST00000362731 ZBTB47Q9UFB7 747 aaPredicted RBP8.99□□□□□ -0.97
RNU6-562P-201ENST00000362731 ZRANB1Q9UGI0 708 aa8.94□□□□□ -0.98
RNU6-562P-201ENST00000362731 PAK3O75914 559 aaPredicted RBP8.93□□□□□ -0.98
RNU6-562P-201ENST00000362731 NUBP1P53384 320 aa8.93□□□□□ -0.98
RNU6-562P-201ENST00000362731 IFNLR1Q8IU57 520 aaPredicted RBP8.92□□□□□ -0.98
RNU6-562P-201ENST00000362731 RASEFQ8IZ41 740 aa8.92□□□□□ -0.98
RNU6-562P-201ENST00000362731 ZNF579Q8NAF0 562 aaKnown RBP8.92□□□□□ -0.98
RNU6-562P-201ENST00000362731 KLHL34Q8N239 644 aa8.9□□□□□ -0.98
RNU6-562P-201ENST00000362731 TSPYL2Q9H2G4 693 aaPredicted RBP8.89□□□□□ -0.99
RNU6-562P-201ENST00000362731 GABBR2O75899 941 aa8.88□□□□□ -0.99
RNU6-562P-201ENST00000362731 CCDC61Q9Y6R9 512 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms