RNA–Protein interactions for RNA: ENST00000362576.1

RNU6-543P-201, Transcript of RNA, U6 small nuclear 543, pseudogene, humanhuman

BASIC

Gene RNU6-543P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-543P-201ENST00000362576 AEBP2Q6ZN18 517 aaPredicted RBP20.81■□□□□ 0.92
RNU6-543P-201ENST00000362576 CHIC1Q5VXU3 224 aa19.58■□□□□ 0.72
RNU6-543P-201ENST00000362576 SENP3Q9H4L4 574 aaPredicted RBP17.71■□□□□ 0.43
RNU6-543P-201ENST00000362576 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
RNU6-543P-201ENST00000362576 FOXD1Q16676 465 aa16.54■□□□□ 0.24
RNU6-543P-201ENST00000362576 PLPPR3Q6T4P5 718 aa15.52■□□□□ 0.08
RNU6-543P-201ENST00000362576 MSH5O43196 834 aa15.51■□□□□ 0.07
RNU6-543P-201ENST00000362576 POTEDQ86YR6 584 aa15.44■□□□□ 0.06
RNU6-543P-201ENST00000362576 PIAS4Q8N2W9 510 aaPredicted RBP15.35■□□□□ 0.05
RNU6-543P-201ENST00000362576 PPP6R1Q9UPN7 881 aa15.35■□□□□ 0.05
RNU6-543P-201ENST00000362576 ADRA2BP18089 450 aa15.23■□□□□ 0.03
RNU6-543P-201ENST00000362576 DMRT2Q9Y5R5 561 aa14.06□□□□□ -0.16
RNU6-543P-201ENST00000362576 MAPK8IP2Q13387 824 aaPredicted RBP14.04□□□□□ -0.16
RNU6-543P-201ENST00000362576 SCAF1Q9H7N4 1312 aaKnown RBP13.88□□□□□ -0.19
RNU6-543P-201ENST00000362576 KCNA4P22459 653 aa13.73□□□□□ -0.21
RNU6-543P-201ENST00000362576 PPP4R3CPQ6ZMV5 832 aa13.57□□□□□ -0.24
RNU6-543P-201ENST00000362576 EHMT2Q96KQ7 1210 aa13.53□□□□□ -0.24
RNU6-543P-201ENST00000362576 HOXD11P31277 338 aaPredicted RBP13.5□□□□□ -0.25
RNU6-543P-201ENST00000362576 CNKSR2Q8WXI2 1034 aa13.36□□□□□ -0.27
RNU6-543P-201ENST00000362576 CACNB1Q02641 598 aaPredicted RBP13.32□□□□□ -0.28
RNU6-543P-201ENST00000362576 NCBP3Q53F19 620 aaKnown RBP13.31□□□□□ -0.28
RNU6-543P-201ENST00000362576 RNF216Q9NWF9 866 aaPredicted RBP13.31□□□□□ -0.28
RNU6-543P-201ENST00000362576 RNF39Q9H2S5 420 aa13.28□□□□□ -0.28
RNU6-543P-201ENST00000362576 DCAF8L1A6NGE4 600 aa13.27□□□□□ -0.29
RNU6-543P-201ENST00000362576 SLC4A1APQ9BWU0 796 aaKnown RBP13.23□□□□□ -0.29
RNU6-543P-201ENST00000362576 DNAJC5BQ9UF47 199 aa13.13□□□□□ -0.31
RNU6-543P-201ENST00000362576 C1QBPQ07021 282 aaKnown RBP13.03□□□□□ -0.32
RNU6-543P-201ENST00000362576 NPM3O75607 178 aaKnown RBP13.02□□□□□ -0.33
RNU6-543P-201ENST00000362576 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
RNU6-543P-201ENST00000362576 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.7□□□□□ -0.38
RNU6-543P-201ENST00000362576 ZBTB22O15209 634 aa12.58□□□□□ -0.4
RNU6-543P-201ENST00000362576 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
RNU6-543P-201ENST00000362576 FOXD4L1Q9NU39 408 aa12.49□□□□□ -0.41
RNU6-543P-201ENST00000362576 SPINK5Q9NQ38 1064 aaPredicted RBP12.37□□□□□ -0.43
RNU6-543P-201ENST00000362576 SLC4A2P04920 1241 aa12.36□□□□□ -0.43
RNU6-543P-201ENST00000362576 DSG3P32926 999 aa12.35□□□□□ -0.43
RNU6-543P-201ENST00000362576 CAPN15O75808 1086 aa12.26□□□□□ -0.45
RNU6-543P-201ENST00000362576 APLP2Q06481 763 aa12.07□□□□□ -0.48
RNU6-543P-201ENST00000362576 ZNF219Q9P2Y4 722 aaPredicted RBP12.07□□□□□ -0.48
RNU6-543P-201ENST00000362576 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.05□□□□□ -0.48
RNU6-543P-201ENST00000362576 MYCNP04198 464 aaPredicted RBP12.05□□□□□ -0.48
RNU6-543P-201ENST00000362576 HNRNPUL2Q1KMD3 747 aaKnown RBP12.05□□□□□ -0.48
RNU6-543P-201ENST00000362576 POTEHQ6S545 545 aa12.04□□□□□ -0.48
RNU6-543P-201ENST00000362576 TRHP20396 242 aaPredicted RBP12.01□□□□□ -0.49
RNU6-543P-201ENST00000362576 ABCB7O75027 752 aa11.99□□□□□ -0.49
RNU6-543P-201ENST00000362576 SAMD1Q6SPF0 538 aaPredicted RBP11.99□□□□□ -0.49
RNU6-543P-201ENST00000362576 ATXN8OSP0DMR3 200 aa11.98□□□□□ -0.49
RNU6-543P-201ENST00000362576 FKBP8Q14318 412 aa11.81□□□□□ -0.52
RNU6-543P-201ENST00000362576 RBM42Q9BTD8 480 aaKnown RBP11.73□□□□□ -0.53
RNU6-543P-201ENST00000362576 AMER1Q5JTC6 1135 aaPredicted RBP11.72□□□□□ -0.53
RNU6-543P-201ENST00000362576 POLA2Q14181 598 aa11.71□□□□□ -0.53
RNU6-543P-201ENST00000362576 RTN4Q9NQC3 1192 aaKnown RBP11.67□□□□□ -0.54
RNU6-543P-201ENST00000362576 ATF5Q9Y2D1 282 aaPredicted RBP11.64□□□□□ -0.55
RNU6-543P-201ENST00000362576 CHRDL2Q6WN34 429 aa11.56□□□□□ -0.56
RNU6-543P-201ENST00000362576 SLC24A1O60721 1099 aa11.49□□□□□ -0.57
RNU6-543P-201ENST00000362576 ZBTB12Q9Y330 459 aaPredicted RBP11.49□□□□□ -0.57
RNU6-543P-201ENST00000362576 AKT1S1Q96B36 256 aa11.46□□□□□ -0.57
RNU6-543P-201ENST00000362576 OSCARQ8IYS5 282 aa11.38□□□□□ -0.59
RNU6-543P-201ENST00000362576 REM2Q8IYK8 340 aaPredicted RBP11.34□□□□□ -0.59
RNU6-543P-201ENST00000362576 PIP4P2Q8N4L2 257 aa11.27□□□□□ -0.61
RNU6-543P-201ENST00000362576 SPDYE4A6NLX3 237 aa11.26□□□□□ -0.61
RNU6-543P-201ENST00000362576 FBXO3Q9UK99 471 aa11.26□□□□□ -0.61
RNU6-543P-201ENST00000362576 PITPNM1O00562 1244 aa11.24□□□□□ -0.61
RNU6-543P-201ENST00000362576 FBLN2P98095 1184 aa11.24□□□□□ -0.61
RNU6-543P-201ENST00000362576 FXR2P51116 673 aaKnown RBP eCLIP11.22□□□□□ -0.61
RNU6-543P-201ENST00000362576 SP7Q8TDD2 431 aaPredicted RBP11.22□□□□□ -0.61
RNU6-543P-201ENST00000362576 SPDYE2BA6NHP3 402 aa11.14□□□□□ -0.63
RNU6-543P-201ENST00000362576 SPDYE6P0CI01 402 aa11.14□□□□□ -0.63
RNU6-543P-201ENST00000362576 MKRN4PQ13434 485 aaPredicted RBP11.14□□□□□ -0.63
RNU6-543P-201ENST00000362576 SPDYE2Q495Y8 402 aa11.14□□□□□ -0.63
RNU6-543P-201ENST00000362576 SSUH2Q9Y2M2 353 aa11.05□□□□□ -0.64
RNU6-543P-201ENST00000362576 VASPP50552 380 aaPredicted RBP11.03□□□□□ -0.64
RNU6-543P-201ENST00000362576 PROM2Q8N271 834 aa11□□□□□ -0.65
RNU6-543P-201ENST00000362576 HAX1O00165 279 aa10.99□□□□□ -0.65
RNU6-543P-201ENST00000362576 EVX2Q03828 476 aa10.97□□□□□ -0.65
RNU6-543P-201ENST00000362576 DCAF8L2P0C7V8 631 aa10.95□□□□□ -0.66
RNU6-543P-201ENST00000362576 SPDYE1Q8NFV5 336 aaPredicted RBP10.95□□□□□ -0.66
RNU6-543P-201ENST00000362576 IFNLR1Q8IU57 520 aaPredicted RBP10.9□□□□□ -0.66
RNU6-543P-201ENST00000362576 ZNF692Q9BU19 519 aaPredicted RBP10.9□□□□□ -0.66
RNU6-543P-201ENST00000362576 PRKAR2AP13861 404 aaKnown RBP10.89□□□□□ -0.67
RNU6-543P-201ENST00000362576 C19orf67A6NJJ6 358 aa10.85□□□□□ -0.67
RNU6-543P-201ENST00000362576 KLHL34Q8N239 644 aa10.85□□□□□ -0.67
RNU6-543P-201ENST00000362576 CLEC11AQ9Y240 323 aa10.84□□□□□ -0.67
RNU6-543P-201ENST00000362576 PLCB2Q00722 1185 aa10.79□□□□□ -0.68
RNU6-543P-201ENST00000362576 PABPN1Q86U42 306 aaKnown RBP eCLIP10.76□□□□□ -0.69
RNU6-543P-201ENST00000362576 STAG3Q9UJ98 1225 aa10.75□□□□□ -0.69
RNU6-543P-201ENST00000362576 PLCD3Q8N3E9 789 aa10.74□□□□□ -0.69
RNU6-543P-201ENST00000362576 SPOCK2Q92563 424 aa10.74□□□□□ -0.69
RNU6-543P-201ENST00000362576 HAP1P54257 671 aaPredicted RBP10.73□□□□□ -0.69
RNU6-543P-201ENST00000362576 PKD2Q13563 968 aa10.73□□□□□ -0.69
RNU6-543P-201ENST00000362576 CHADLQ6NUI6 762 aa10.73□□□□□ -0.69
RNU6-543P-201ENST00000362576 MIER1Q8N108 512 aa10.69□□□□□ -0.7
RNU6-543P-201ENST00000362576 GABBR2O75899 941 aa10.68□□□□□ -0.7
RNU6-543P-201ENST00000362576 PRR29P0C7W0 189 aa10.68□□□□□ -0.7
RNU6-543P-201ENST00000362576 ECM2O94769 699 aaPredicted RBP10.66□□□□□ -0.7
RNU6-543P-201ENST00000362576 PLEKHG5O94827 1062 aa10.63□□□□□ -0.71
RNU6-543P-201ENST00000362576 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.62□□□□□ -0.71
RNU6-543P-201ENST00000362576 FARP1Q9Y4F1 1045 aaPredicted RBP10.59□□□□□ -0.71
RNU6-543P-201ENST00000362576 CIZ1Q9ULV3 898 aaPredicted RBP10.55□□□□□ -0.72
RNU6-543P-201ENST00000362576 CD44P16070 742 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms