RNA–Protein interactions for RNA: ENST00000362402.1

RNU6-349P-201, Transcript of RNA, U6 small nuclear 349, pseudogene, humanhuman

BASIC

Gene RNU6-349P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-349P-201ENST00000362402 AEBP2Q6ZN18 517 aaPredicted RBP11.33□□□□□ -0.6
RNU6-349P-201ENST00000362402 CHIC1Q5VXU3 224 aa10.61□□□□□ -0.71
RNU6-349P-201ENST00000362402 SENP3Q9H4L4 574 aaPredicted RBP9.68□□□□□ -0.86
RNU6-349P-201ENST00000362402 PHF23Q9BUL5 403 aaPredicted RBP9.56□□□□□ -0.88
RNU6-349P-201ENST00000362402 FOXD1Q16676 465 aa9.06□□□□□ -0.96
RNU6-349P-201ENST00000362402 POTEDQ86YR6 584 aa8.59□□□□□ -1.03
RNU6-349P-201ENST00000362402 MSH5O43196 834 aa8.52□□□□□ -1.05
RNU6-349P-201ENST00000362402 PIAS4Q8N2W9 510 aaPredicted RBP8.46□□□□□ -1.06
RNU6-349P-201ENST00000362402 PLPPR3Q6T4P5 718 aa8.42□□□□□ -1.06
RNU6-349P-201ENST00000362402 PPP6R1Q9UPN7 881 aa8.36□□□□□ -1.07
RNU6-349P-201ENST00000362402 ADRA2BP18089 450 aa8.35□□□□□ -1.07
RNU6-349P-201ENST00000362402 MAPK8IP2Q13387 824 aaPredicted RBP7.72□□□□□ -1.17
RNU6-349P-201ENST00000362402 DMRT2Q9Y5R5 561 aa7.65□□□□□ -1.18
RNU6-349P-201ENST00000362402 SCAF1Q9H7N4 1312 aaKnown RBP7.63□□□□□ -1.19
RNU6-349P-201ENST00000362402 CACNB1Q02641 598 aaPredicted RBP7.46□□□□□ -1.22
RNU6-349P-201ENST00000362402 DCAF8L1A6NGE4 600 aa7.45□□□□□ -1.22
RNU6-349P-201ENST00000362402 PPP4R3CPQ6ZMV5 832 aa7.38□□□□□ -1.23
RNU6-349P-201ENST00000362402 HOXD11P31277 338 aaPredicted RBP7.29□□□□□ -1.24
RNU6-349P-201ENST00000362402 CNKSR2Q8WXI2 1034 aa7.26□□□□□ -1.25
RNU6-349P-201ENST00000362402 RNF39Q9H2S5 420 aa7.24□□□□□ -1.25
RNU6-349P-201ENST00000362402 RNF216Q9NWF9 866 aaPredicted RBP7.21□□□□□ -1.26
RNU6-349P-201ENST00000362402 C1QBPQ07021 282 aaKnown RBP7.14□□□□□ -1.27
RNU6-349P-201ENST00000362402 NCBP3Q53F19 620 aaKnown RBP7.05□□□□□ -1.28
RNU6-349P-201ENST00000362402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.03□□□□□ -1.28
RNU6-349P-201ENST00000362402 DNAJC5BQ9UF47 199 aa7.02□□□□□ -1.29
RNU6-349P-201ENST00000362402 NPM3O75607 178 aaKnown RBP6.94□□□□□ -1.3
RNU6-349P-201ENST00000362402 CAPN15O75808 1086 aa6.82□□□□□ -1.32
RNU6-349P-201ENST00000362402 U3KPZ7 1027 aaPredicted RBP6.81□□□□□ -1.32
RNU6-349P-201ENST00000362402 SPINK5Q9NQ38 1064 aaPredicted RBP6.79□□□□□ -1.32
RNU6-349P-201ENST00000362402 DSG3P32926 999 aa6.76□□□□□ -1.33
RNU6-349P-201ENST00000362402 POTEHQ6S545 545 aa6.71□□□□□ -1.34
RNU6-349P-201ENST00000362402 KCNA4P22459 653 aa6.69□□□□□ -1.34
RNU6-349P-201ENST00000362402 TRHP20396 242 aaPredicted RBP6.68□□□□□ -1.34
RNU6-349P-201ENST00000362402 SLC4A2P04920 1241 aa6.65□□□□□ -1.34
RNU6-349P-201ENST00000362402 ABCB7O75027 752 aa6.64□□□□□ -1.35
RNU6-349P-201ENST00000362402 APLP2Q06481 763 aa6.62□□□□□ -1.35
RNU6-349P-201ENST00000362402 ZNF219Q9P2Y4 722 aaPredicted RBP6.6□□□□□ -1.35
RNU6-349P-201ENST00000362402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.57□□□□□ -1.36
RNU6-349P-201ENST00000362402 HNRNPUL2Q1KMD3 747 aaKnown RBP6.57□□□□□ -1.36
RNU6-349P-201ENST00000362402 SAMD1Q6SPF0 538 aaPredicted RBP6.53□□□□□ -1.36
RNU6-349P-201ENST00000362402 RBM42Q9BTD8 480 aaKnown RBP6.45□□□□□ -1.38
RNU6-349P-201ENST00000362402 POLA2Q14181 598 aa6.43□□□□□ -1.38
RNU6-349P-201ENST00000362402 MYCNP04198 464 aaPredicted RBP6.42□□□□□ -1.38
RNU6-349P-201ENST00000362402 CHRDL2Q6WN34 429 aa6.38□□□□□ -1.39
RNU6-349P-201ENST00000362402 SLC4A1APQ9BWU0 796 aaKnown RBP6.29□□□□□ -1.4
RNU6-349P-201ENST00000362402 ATF5Q9Y2D1 282 aaPredicted RBP6.29□□□□□ -1.4
RNU6-349P-201ENST00000362402 FOXD4L1Q9NU39 408 aa6.28□□□□□ -1.4
RNU6-349P-201ENST00000362402 AKT1S1Q96B36 256 aa6.27□□□□□ -1.41
RNU6-349P-201ENST00000362402 ZBTB12Q9Y330 459 aaPredicted RBP6.25□□□□□ -1.41
RNU6-349P-201ENST00000362402 OSCARQ8IYS5 282 aa6.23□□□□□ -1.41
RNU6-349P-201ENST00000362402 REM2Q8IYK8 340 aaPredicted RBP6.22□□□□□ -1.41
RNU6-349P-201ENST00000362402 SP7Q8TDD2 431 aaPredicted RBP6.21□□□□□ -1.42
RNU6-349P-201ENST00000362402 PIP4P2Q8N4L2 257 aa6.19□□□□□ -1.42
RNU6-349P-201ENST00000362402 HAX1O00165 279 aa6.17□□□□□ -1.42
RNU6-349P-201ENST00000362402 PITPNM1O00562 1244 aa6.15□□□□□ -1.42
RNU6-349P-201ENST00000362402 ZBTB22O15209 634 aa6.12□□□□□ -1.43
RNU6-349P-201ENST00000362402 FXR2P51116 673 aaKnown RBP eCLIP6.11□□□□□ -1.43
RNU6-349P-201ENST00000362402 FBLN2P98095 1184 aa6.08□□□□□ -1.44
RNU6-349P-201ENST00000362402 CLEC11AQ9Y240 323 aa6.06□□□□□ -1.44
RNU6-349P-201ENST00000362402 SPDYE2BA6NHP3 402 aa6.05□□□□□ -1.44
RNU6-349P-201ENST00000362402 SPDYE6P0CI01 402 aa6.05□□□□□ -1.44
RNU6-349P-201ENST00000362402 ATXN8OSP0DMR3 200 aa6.05□□□□□ -1.44
RNU6-349P-201ENST00000362402 EVX2Q03828 476 aa6.05□□□□□ -1.44
RNU6-349P-201ENST00000362402 SPDYE2Q495Y8 402 aa6.05□□□□□ -1.44
RNU6-349P-201ENST00000362402 PRKAR2AP13861 404 aaKnown RBP6.02□□□□□ -1.45
RNU6-349P-201ENST00000362402 SPDYE1Q8NFV5 336 aaPredicted RBP6□□□□□ -1.45
RNU6-349P-201ENST00000362402 ZNF692Q9BU19 519 aaPredicted RBP6□□□□□ -1.45
RNU6-349P-201ENST00000362402 MKRN4PQ13434 485 aaPredicted RBP5.98□□□□□ -1.45
RNU6-349P-201ENST00000362402 CHADLQ6NUI6 762 aa5.94□□□□□ -1.46
RNU6-349P-201ENST00000362402 SSUH2Q9Y2M2 353 aa5.93□□□□□ -1.46
RNU6-349P-201ENST00000362402 C19orf67A6NJJ6 358 aa5.92□□□□□ -1.46
RNU6-349P-201ENST00000362402 PRR29P0C7W0 189 aa5.91□□□□□ -1.46
RNU6-349P-201ENST00000362402 PABPN1Q86U42 306 aaKnown RBP eCLIP5.91□□□□□ -1.46
RNU6-349P-201ENST00000362402 GABBR2O75899 941 aa5.9□□□□□ -1.46
RNU6-349P-201ENST00000362402 LHX8Q68G74 356 aa5.84□□□□□ -1.47
RNU6-349P-201ENST00000362402 CD44P16070 742 aaKnown RBP5.82□□□□□ -1.48
RNU6-349P-201ENST00000362402 FARP1Q9Y4F1 1045 aaPredicted RBP5.8□□□□□ -1.48
RNU6-349P-201ENST00000362402 POTEIP0CG38 1075 aa5.75□□□□□ -1.49
RNU6-349P-201ENST00000362402 DCBLD2Q96PD2 775 aa5.74□□□□□ -1.49
RNU6-349P-201ENST00000362402 CSRNP3Q8WYN3 585 aa5.73□□□□□ -1.49
RNU6-349P-201ENST00000362402 ZRANB1Q9UGI0 708 aa5.73□□□□□ -1.49
RNU6-349P-201ENST00000362402 CLCN6P51797 869 aa5.71□□□□□ -1.5
RNU6-349P-201ENST00000362402 CREBZFQ9NS37 354 aa5.69□□□□□ -1.5
RNU6-349P-201ENST00000362402 STAG3Q9UJ98 1225 aa5.69□□□□□ -1.5
RNU6-349P-201ENST00000362402 ZNF579Q8NAF0 562 aaKnown RBP5.67□□□□□ -1.5
RNU6-349P-201ENST00000362402 GALR2O43603 387 aaPredicted RBP5.66□□□□□ -1.5
RNU6-349P-201ENST00000362402 SPDYE4A6NLX3 237 aa5.65□□□□□ -1.5
RNU6-349P-201ENST00000362402 PAK3O75914 559 aaPredicted RBP5.65□□□□□ -1.5
RNU6-349P-201ENST00000362402 PLSCR2Q9NRY7 297 aa5.65□□□□□ -1.5
RNU6-349P-201ENST00000362402 EHMT2Q96KQ7 1210 aa5.63□□□□□ -1.51
RNU6-349P-201ENST00000362402 PHF12Q96QT6 1004 aa5.62□□□□□ -1.51
RNU6-349P-201ENST00000362402 NPM1P06748 294 aaKnown RBP eCLIP5.6□□□□□ -1.51
RNU6-349P-201ENST00000362402 OTUD5Q96G74 571 aa5.58□□□□□ -1.52
RNU6-349P-201ENST00000362402 POTEB2H3BUK9 544 aa5.57□□□□□ -1.52
RNU6-349P-201ENST00000362402 PELP1Q8IZL8 1130 aaKnown RBP5.55□□□□□ -1.52
RNU6-349P-201ENST00000362402 MNX1P50219 401 aaPredicted RBP5.54□□□□□ -1.52
RNU6-349P-201ENST00000362402 TSPYL2Q9H2G4 693 aaPredicted RBP5.54□□□□□ -1.52
RNU6-349P-201ENST00000362402 MS4A3Q96HJ5 214 aa5.53□□□□□ -1.52
RNU6-349P-201ENST00000362402 POTEMA6NI47 508 aa5.52□□□□□ -1.53
RNU6-349P-201ENST00000362402 METRNQ9UJH8 293 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms