RNA–Protein interactions for RNA: ENST00000361420.7

IGSF1-201, Transcript of immunoglobulin superfamily member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IGSF1, Length 4,378 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGSF1-201ENST00000361420 NISCHQ9Y2I1 1504 aa18.56■□□□□ 0.56
IGSF1-201ENST00000361420 DCAF8L2P0C7V8 631 aa17.86■□□□□ 0.45
IGSF1-201ENST00000361420 SUPT5HO00267 1087 aaKnown RBP17.3■□□□□ 0.36
IGSF1-201ENST00000361420 SHROOM4Q9ULL8 1493 aa17.17■□□□□ 0.34
IGSF1-201ENST00000361420 EHMT2Q96KQ7 1210 aa16.34■□□□□ 0.21
IGSF1-201ENST00000361420 FAM9AQ8IZU1 332 aaPredicted RBP16.19■□□□□ 0.18
IGSF1-201ENST00000361420 PCGF6Q9BYE7 350 aa16.17■□□□□ 0.18
IGSF1-201ENST00000361420 TRIM41Q8WV44 630 aa16.09■□□□□ 0.17
IGSF1-201ENST00000361420 APLP2Q06481 763 aa15.98■□□□□ 0.15
IGSF1-201ENST00000361420 CHIC1Q5VXU3 224 aa15.88■□□□□ 0.13
IGSF1-201ENST00000361420 ZEB1P37275 1124 aaPredicted RBP15.83■□□□□ 0.13
IGSF1-201ENST00000361420 TTBK1Q5TCY1 1321 aaPredicted RBP15.8■□□□□ 0.12
IGSF1-201ENST00000361420 UBTFP17480 764 aaKnown RBP15.7■□□□□ 0.1
IGSF1-201ENST00000361420 LOC105371045A0A1W2PR82 267 aa15.67■□□□□ 0.1
IGSF1-201ENST00000361420 CCER1Q8TC90 406 aaPredicted RBP15.67■□□□□ 0.1
IGSF1-201ENST00000361420 TRIM26Q12899 539 aaPredicted RBP15.67■□□□□ 0.1
IGSF1-201ENST00000361420 RANGAP1P46060 587 aaPredicted RBP15.63■□□□□ 0.09
IGSF1-201ENST00000361420 HRCP23327 699 aa15.61■□□□□ 0.09
IGSF1-201ENST00000361420 PELP1Q8IZL8 1130 aaKnown RBP15.52■□□□□ 0.07
IGSF1-201ENST00000361420 PPARGC1BQ86YN6 1023 aaKnown RBP15.51■□□□□ 0.07
IGSF1-201ENST00000361420 ZCCHC6Q5VYS8 1495 aaKnown RBP15.46■□□□□ 0.07
IGSF1-201ENST00000361420 ABCC9O60706 1549 aa15.46■□□□□ 0.07
IGSF1-201ENST00000361420 CENPBP07199 599 aaPredicted RBP15.46■□□□□ 0.07
IGSF1-201ENST00000361420 ATP1B4Q9UN42 357 aaPredicted RBP15.38■□□□□ 0.05
IGSF1-201ENST00000361420 CCDC180Q9P1Z9 1646 aa15.32■□□□□ 0.04
IGSF1-201ENST00000361420 PABPN1Q86U42 306 aaKnown RBP eCLIP15.22■□□□□ 0.034e-9■■■□□ 14.6
IGSF1-201ENST00000361420 HNRNPUL2Q1KMD3 747 aaKnown RBP15.15■□□□□ 0.02
IGSF1-201ENST00000361420 YTHDC1Q96MU7 727 aaKnown RBP15.12■□□□□ 0.01
IGSF1-201ENST00000361420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.11■□□□□ 0.01
IGSF1-201ENST00000361420 SCRIBQ14160 1630 aa15.08■□□□□ 0
IGSF1-201ENST00000361420 ITGAEP38570 1179 aa15.07■□□□□ 0
IGSF1-201ENST00000361420 CSRNP3Q8WYN3 585 aa14.97□□□□□ -0.01
IGSF1-201ENST00000361420 DCAF1Q9Y4B6 1507 aa14.96□□□□□ -0.01
IGSF1-201ENST00000361420 DIEXFQ68CQ4 756 aaKnown RBP14.94□□□□□ -0.02
IGSF1-201ENST00000361420 NEFLP07196 543 aa14.93□□□□□ -0.02
IGSF1-201ENST00000361420 RSF1Q96T23 1441 aaPredicted RBP14.85□□□□□ -0.03
IGSF1-201ENST00000361420 MYO15BQ96JP2 1530 aa14.82□□□□□ -0.04
IGSF1-201ENST00000361420 FAM50AQ14320 339 aaKnown RBP14.78□□□□□ -0.04
IGSF1-201ENST00000361420 ERICH6Q7L0X2 663 aa14.77□□□□□ -0.05
IGSF1-201ENST00000361420 NACADO15069 1562 aa14.73□□□□□ -0.05
IGSF1-201ENST00000361420 RB1CC1Q8TDY2 1594 aa14.71□□□□□ -0.05
IGSF1-201ENST00000361420 ZNF316A6NFI3 1004 aaPredicted RBP14.71□□□□□ -0.05
IGSF1-201ENST00000361420 MYT1Q01538 1121 aa14.64□□□□□ -0.07
IGSF1-201ENST00000361420 NEUROD1Q13562 356 aa14.64□□□□□ -0.07
IGSF1-201ENST00000361420 POLR3GLQ9BT43 218 aa14.63□□□□□ -0.07
IGSF1-201ENST00000361420 P3H3Q8IVL6 736 aa14.59□□□□□ -0.07
IGSF1-201ENST00000361420 TRIM52Q96A61 297 aa14.59□□□□□ -0.07
IGSF1-201ENST00000361420 GTF3C3Q9Y5Q9 886 aa14.57□□□□□ -0.08
IGSF1-201ENST00000361420 EEA1Q15075 1411 aa14.56□□□□□ -0.08
IGSF1-201ENST00000361420 MYT1LQ9UL68 1186 aa14.54□□□□□ -0.08
IGSF1-201ENST00000361420 CECR2Q9BXF3 1484 aa14.54□□□□□ -0.08
IGSF1-201ENST00000361420 ACIN1Q9UKV3 1341 aaKnown RBP14.52□□□□□ -0.08
IGSF1-201ENST00000361420 BAZ1AQ9NRL2 1556 aaPredicted RBP14.5□□□□□ -0.09
IGSF1-201ENST00000361420 CNGB1Q14028 1251 aaPredicted RBP14.5□□□□□ -0.09
IGSF1-201ENST00000361420 CLIP1P30622 1438 aa14.48□□□□□ -0.09
IGSF1-201ENST00000361420 ANP32CO43423 234 aa14.47□□□□□ -0.09
IGSF1-201ENST00000361420 WRNQ14191 1432 aaPredicted RBP eCLIP14.47□□□□□ -0.09
IGSF1-201ENST00000361420 CEP162Q5TB80 1403 aa14.47□□□□□ -0.09
IGSF1-201ENST00000361420 GOLGA3Q08378 1498 aa14.45□□□□□ -0.1
IGSF1-201ENST00000361420 TNIKQ9UKE5 1360 aa14.43□□□□□ -0.1
IGSF1-201ENST00000361420 FBLN2P98095 1184 aa14.42□□□□□ -0.1
IGSF1-201ENST00000361420 BAZ1BQ9UIG0 1483 aaKnown RBP14.39□□□□□ -0.11
IGSF1-201ENST00000361420 MROH2BQ7Z745 1585 aa14.38□□□□□ -0.11
IGSF1-201ENST00000361420 ARID3CA6NKF2 412 aa14.36□□□□□ -0.11
IGSF1-201ENST00000361420 CDK11AQ9UQ88 783 aaPredicted RBP14.35□□□□□ -0.11
IGSF1-201ENST00000361420 CEP164Q9UPV0 1460 aa14.34□□□□□ -0.11
IGSF1-201ENST00000361420 ZNF326Q5BKZ1 582 aaKnown RBP14.33□□□□□ -0.12
IGSF1-201ENST00000361420 BCANQ96GW7 911 aa14.29□□□□□ -0.12
IGSF1-201ENST00000361420 TONSLQ96HA7 1378 aa14.29□□□□□ -0.12
IGSF1-201ENST00000361420 KIF27Q86VH2 1401 aa14.28□□□□□ -0.12
IGSF1-201ENST00000361420 SOGA1O94964 1423 aa14.27□□□□□ -0.13
IGSF1-201ENST00000361420 CCDC88BA6NC98 1476 aa14.26□□□□□ -0.13
IGSF1-201ENST00000361420 ZNF777Q9ULD5 760 aaPredicted RBP14.25□□□□□ -0.13
IGSF1-201ENST00000361420 DAXXQ9UER7 740 aaPredicted RBP14.24□□□□□ -0.13
IGSF1-201ENST00000361420 MTUS2Q5JR59 1369 aa14.23□□□□□ -0.13
IGSF1-201ENST00000361420 DDX10Q13206 875 aaKnown RBP14.23□□□□□ -0.13
IGSF1-201ENST00000361420 CLSPNQ9HAW4 1339 aa14.23□□□□□ -0.13
IGSF1-201ENST00000361420 MIER1Q8N108 512 aa14.21□□□□□ -0.13
IGSF1-201ENST00000361420 SLC4A1APQ9BWU0 796 aaKnown RBP14.2□□□□□ -0.14
IGSF1-201ENST00000361420 CHIC2Q9UKJ5 165 aa14.18□□□□□ -0.14
IGSF1-201ENST00000361420 WIZO95785 1651 aa14.18□□□□□ -0.14
IGSF1-201ENST00000361420 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
IGSF1-201ENST00000361420 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
IGSF1-201ENST00000361420 TOP2AP11388 1531 aaKnown RBP14.14□□□□□ -0.15
IGSF1-201ENST00000361420 SMARCA2P51531 1590 aa14.09□□□□□ -0.15
IGSF1-201ENST00000361420 VPS8Q8N3P4 1428 aa14.09□□□□□ -0.15
IGSF1-201ENST00000361420 FKBP8Q14318 412 aa14.08□□□□□ -0.16
IGSF1-201ENST00000361420 HNRNPUQ00839 825 aaKnown RBP eCLIP14.07□□□□□ -0.16
IGSF1-201ENST00000361420 CHMP7Q8WUX9 453 aaPredicted RBP14.06□□□□□ -0.16
IGSF1-201ENST00000361420 CARMIL1Q5VZK9 1371 aa14.05□□□□□ -0.16
IGSF1-201ENST00000361420 RRP7BPQ9NSQ0 103 aa14.05□□□□□ -0.16
IGSF1-201ENST00000361420 TSPY4P0CV99 314 aa14.04□□□□□ -0.16
IGSF1-201ENST00000361420 TSPY10P0CW01 314 aa14.04□□□□□ -0.16
IGSF1-201ENST00000361420 CUX2O14529 1486 aa14.04□□□□□ -0.16
IGSF1-201ENST00000361420 CCNB3Q8WWL7 1395 aa14.04□□□□□ -0.16
IGSF1-201ENST00000361420 HIRIP3Q9BW71 556 aaPredicted RBP14.04□□□□□ -0.16
IGSF1-201ENST00000361420 RTL5Q5HYW3 569 aaPredicted RBP14.03□□□□□ -0.16
IGSF1-201ENST00000361420 FHAD1B1AJZ9 1412 aa14.02□□□□□ -0.16
IGSF1-201ENST00000361420 FAM9BQ8IZU0 186 aa14.01□□□□□ -0.17
IGSF1-201ENST00000361420 EIF4G2P78344 907 aaKnown RBP eCLIP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms