RNA–Protein interactions for RNA: ENST00000360876.8

EIF3B-201, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3B, Length 3,055 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-201ENST00000360876 DDX3XO00571 662 aaKnown RBP eCLIP19.64■□□□□ 0.732e-33■■□□□ 13.4
EIF3B-201ENST00000360876 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.66■□□□□ 0.428e-16■■■□□ 17.9
EIF3B-201ENST00000360876 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.36■□□□□ 0.533e-15■□□□□ 8.8
EIF3B-201ENST00000360876 UPF1Q92900 1129 aaKnown RBP eCLIP17.4■□□□□ 0.383e-14■■■■■ 47.6
EIF3B-201ENST00000360876 FTOQ9C0B1 505 aaKnown RBP eCLIP21.51■■□□□ 1.035e-13■■■□□ 18.6
EIF3B-201ENST00000360876 SMNDC1O75940 238 aaKnown RBP eCLIP18.87■□□□□ 0.612e-12■■□□□ 12.9
EIF3B-201ENST00000360876 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.79■□□□□ 0.65e-12■□□□□ 11.3
EIF3B-201ENST00000360876 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.34■□□□□ 0.532e-11■■■■■ 41.9
EIF3B-201ENST00000360876 YBX3P16989 372 aaKnown RBP eCLIP18.26■□□□□ 0.512e-11■□□□□ 9.8
EIF3B-201ENST00000360876 PABPC4Q13310 644 aaKnown RBP eCLIP19.84■□□□□ 0.774e-11■□□□□ 10.8
EIF3B-201ENST00000360876 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.44■□□□□ 0.544e-10■□□□□ 8.2
EIF3B-201ENST00000360876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.35■■□□□ 1.495e-10■■□□□ 12.3
EIF3B-201ENST00000360876 METAP2P50579 478 aaKnown RBP eCLIP20.82■□□□□ 0.927e-10■■■■■ 41
EIF3B-201ENST00000360876 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17■□□□□ 0.313e-9■□□□□ 9.7
EIF3B-201ENST00000360876 SRSF1Q07955 248 aaKnown RBP eCLIP13.63□□□□□ -0.235e-9■□□□□ 8.5
EIF3B-201ENST00000360876 SUB1P53999 127 aaKnown RBP eCLIP14.33□□□□□ -0.129e-9■■■□□ 15.9
EIF3B-201ENST00000360876 GPKOWQ92917 476 aaPredicted RBP eCLIP20.46■□□□□ 0.871e-8■■■■■ 30.5
EIF3B-201ENST00000360876 DDX42Q86XP3 938 aaKnown RBP eCLIP19.95■□□□□ 0.782e-8■■■■□ 23.4
EIF3B-201ENST00000360876 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.34■□□□□ 0.372e-8■■■■□ 19.3
EIF3B-201ENST00000360876 PPIGQ13427 754 aaKnown RBP eCLIP17.34■□□□□ 0.372e-8■□□□□ 10.8
EIF3B-201ENST00000360876 SF3B4Q15427 424 aaKnown RBP eCLIP17.48■□□□□ 0.394e-8■■■■■ 27
EIF3B-201ENST00000360876 PCBP1Q15365 356 aaKnown RBP eCLIP17.68■□□□□ 0.424e-8■■□□□ 12.4
EIF3B-201ENST00000360876 NIPBLQ6KC79 2804 aaeCLIP13.68□□□□□ -0.224e-8■□□□□ 9.9
EIF3B-201ENST00000360876 HNRNPMP52272 730 aaKnown RBP eCLIP24.33■■□□□ 1.485e-8■■■■□ 23.8
EIF3B-201ENST00000360876 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.22■□□□□ 0.675e-8■■■■■ 33.1
EIF3B-201ENST00000360876 XRCC6P12956 609 aaKnown RBP eCLIP22.74■■□□□ 1.237e-8■■□□□ 13.3
EIF3B-201ENST00000360876 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.27□□□□□ -0.128e-8■■■■□ 26.4
EIF3B-201ENST00000360876 FXR2P51116 673 aaKnown RBP eCLIP19.71■□□□□ 0.758e-8■■■□□ 17.8
EIF3B-201ENST00000360876 EFTUD2Q15029 972 aaKnown RBP eCLIP19.18■□□□□ 0.669e-8■■■□□ 17.1
EIF3B-201ENST00000360876 U2AF2P26368 475 aaKnown RBP eCLIP21.37■■□□□ 1.011e-7■■■□□ 19.2
EIF3B-201ENST00000360876 PUM1Q14671 1186 aaKnown RBP eCLIP17.19■□□□□ 0.341e-7■■□□□ 13.6
EIF3B-201ENST00000360876 AKAP1Q92667 903 aaKnown RBP eCLIP16.75■□□□□ 0.271e-7■■■■□ 22.3
EIF3B-201ENST00000360876 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.72■□□□□ 0.591e-7■■■■■ 34.8
EIF3B-201ENST00000360876 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.74■□□□□ 0.912e-7■■■■□ 21.2
EIF3B-201ENST00000360876 LARP4Q71RC2 724 aaKnown RBP eCLIP17.98■□□□□ 0.472e-7■■■□□ 16.7
EIF3B-201ENST00000360876 RBM15Q96T37 977 aaKnown RBP eCLIP19.15■□□□□ 0.662e-7■■■□□ 15.1
EIF3B-201ENST00000360876 WRNQ14191 1432 aaPredicted RBP eCLIP26.92■■□□□ 1.92e-7■□□□□ 9.5
EIF3B-201ENST00000360876 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.57■□□□□ 0.722e-7■■□□□ 13
EIF3B-201ENST00000360876 NOLC1Q14978 699 aaKnown RBP eCLIP21.55■■□□□ 1.043e-7■■■□□ 14.8
EIF3B-201ENST00000360876 HNRNPKP61978 463 aaKnown RBP eCLIP15.77■□□□□ 0.123e-7■■■■□ 25.9
EIF3B-201ENST00000360876 PRPF4O43172 522 aaKnown RBP eCLIP18.82■□□□□ 0.63e-7■□□□□ 10.2
EIF3B-201ENST00000360876 AQRO60306 1485 aaKnown RBP eCLIP25.22■■□□□ 1.634e-7■■■■□ 26.3
EIF3B-201ENST00000360876 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.73■□□□□ 0.434e-7■■■■□ 21.6
EIF3B-201ENST00000360876 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.61■□□□□ 0.894e-7■■□□□ 13.5
EIF3B-201ENST00000360876 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.79■□□□□ 0.124e-7■■■■□ 21.9
EIF3B-201ENST00000360876 FMR1Q06787 632 aaKnown RBP eCLIP20.76■□□□□ 0.915e-7■■■□□ 16.3
EIF3B-201ENST00000360876 PABPN1Q86U42 306 aaKnown RBP eCLIP27.59■■■□□ 2.015e-7■■■□□ 16.4
EIF3B-201ENST00000360876 HNRNPCP07910 306 aaKnown RBP eCLIP18.06■□□□□ 0.485e-7■□□□□ 10.8
EIF3B-201ENST00000360876 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.65■□□□□ 0.95e-7■□□□□ 10.6
EIF3B-201ENST00000360876 RBFOX2O43251 390 aaKnown RBP eCLIP15.03■□□□□ -06e-7■■■■□ 25.4
EIF3B-201ENST00000360876 RPS3P23396 243 aaKnown RBP eCLIP17.28■□□□□ 0.366e-7■■□□□ 11.9
EIF3B-201ENST00000360876 FXR1P51114 621 aaKnown RBP eCLIP20.52■□□□□ 0.876e-7■■■□□ 14.9
EIF3B-201ENST00000360876 G3BP1Q13283 466 aaKnown RBP eCLIP21.45■■□□□ 1.027e-7■■□□□ 12.3
EIF3B-201ENST00000360876 ZC3H11AO75152 810 aaKnown RBP eCLIP18.77■□□□□ 0.67e-7■■■■□ 20.6
EIF3B-201ENST00000360876 EWSR1Q01844 656 aaKnown RBP eCLIP15.56■□□□□ 0.089e-7■□□□□ 10.2
EIF3B-201ENST00000360876 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.79■□□□□ 0.61e-6■■□□□ 13.9
EIF3B-201ENST00000360876 GTF2F1P35269 517 aaKnown RBP eCLIP21.09■□□□□ 0.971e-6■□□□□ 8.7
EIF3B-201ENST00000360876 EIF4G2P78344 907 aaKnown RBP eCLIP24.94■■□□□ 1.581e-6■■■□□ 15.3
EIF3B-201ENST00000360876 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.94■□□□□ 0.781e-6■■■■■ 83.7
EIF3B-201ENST00000360876 RBM22Q9NW64 420 aaKnown RBP eCLIP18.16■□□□□ 0.51e-6■■■□□ 14.8
EIF3B-201ENST00000360876 PTBP1P26599 531 aaKnown RBP eCLIP16.43■□□□□ 0.221e-6■□□□□ 8.7
EIF3B-201ENST00000360876 KHSRPQ92945 711 aaKnown RBP eCLIP18.53■□□□□ 0.561e-6■■□□□ 12.5
EIF3B-201ENST00000360876 TARDBPQ13148 414 aaKnown RBP eCLIP17.17■□□□□ 0.341e-6■■■□□ 14.7
EIF3B-201ENST00000360876 SF3A3Q12874 501 aaKnown RBP eCLIP20.11■□□□□ 0.811e-6■■■□□ 17.1
EIF3B-201ENST00000360876 TIA1P31483 386 aaKnown RBP eCLIP17.19■□□□□ 0.341e-6■■■□□ 17
EIF3B-201ENST00000360876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.33■■□□□ 1.332e-6■■□□□ 13
EIF3B-201ENST00000360876 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.82■□□□□ 0.762e-6■■■□□ 15.2
EIF3B-201ENST00000360876 ZNF622Q969S3 477 aaKnown RBP eCLIP19.56■□□□□ 0.722e-6■□□□□ 11
EIF3B-201ENST00000360876 SF3B1O75533 1304 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■■■■■ 50.6
EIF3B-201ENST00000360876 GRSF1Q12849 480 aaKnown RBP eCLIP17.55■□□□□ 0.42e-6■■■□□ 15.5
EIF3B-201ENST00000360876 CDC40O60508 579 aaKnown RBP eCLIP16.32■□□□□ 0.23e-6■■■■□ 23
EIF3B-201ENST00000360876 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.33■□□□□ 0.373e-6■■■■■ 27.8
EIF3B-201ENST00000360876 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.2■■□□□ 1.143e-6■■□□□ 11.4
EIF3B-201ENST00000360876 ZRANB2O95218 330 aaKnown RBP eCLIP20.51■□□□□ 0.873e-6■■■□□ 14.9
EIF3B-201ENST00000360876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.73■■□□□ 1.555e-6■■□□□ 13.9
EIF3B-201ENST00000360876 DDX6P26196 483 aaKnown RBP eCLIP16.56■□□□□ 0.245e-6■■□□□ 13
EIF3B-201ENST00000360876 AARSP49588 968 aaKnown RBP eCLIP19.88■□□□□ 0.775e-6■■■■□ 20.7
EIF3B-201ENST00000360876 SRSF7Q16629 238 aaKnown RBP eCLIP14.96□□□□□ -0.025e-6■□□□□ 8.4
EIF3B-201ENST00000360876 RBM5P52756 815 aaKnown RBP eCLIP19.69■□□□□ 0.748e-6■■□□□ 11.9
EIF3B-201ENST00000360876 NCBP2P52298 156 aaKnown RBP eCLIP16.98■□□□□ 0.318e-6■■□□□ 13
EIF3B-201ENST00000360876 WDR43Q15061 677 aaKnown RBP eCLIP23.72■■□□□ 1.391e-5■■■■□ 24.6
Retrieved 81 of 81 RNA–protein pairs in 220.1 ms