RNA–Protein interactions for RNA: ENST00000360876.8

EIF3B-201, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3B, Length 3,055 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-201ENST00000360876 BIVM-ERCC5R4GMW8 1640 aa25.71■■□□□ 1.71
EIF3B-201ENST00000360876 CARMIL1Q5VZK9 1371 aa25.69■■□□□ 1.7
EIF3B-201ENST00000360876 IRX6P78412 446 aaPredicted RBP25.67■■□□□ 1.7
EIF3B-201ENST00000360876 WDR97A6NE52 1622 aa25.66■■□□□ 1.7
EIF3B-201ENST00000360876 MAPKBP1O60336 1514 aa25.66■■□□□ 1.7
EIF3B-201ENST00000360876 CNGB1Q14028 1251 aaPredicted RBP25.65■■□□□ 1.7
EIF3B-201ENST00000360876 FHOD3Q2V2M9 1422 aa25.64■■□□□ 1.7
EIF3B-201ENST00000360876 SETD5Q9C0A6 1442 aa25.63■■□□□ 1.69
EIF3B-201ENST00000360876 CFTRP13569 1480 aa25.57■■□□□ 1.68
EIF3B-201ENST00000360876 CHIC2Q9UKJ5 165 aa25.56■■□□□ 1.68
EIF3B-201ENST00000360876 NCAPD3P42695 1498 aa25.55■■□□□ 1.68
EIF3B-201ENST00000360876 FGD5Q6ZNL6 1462 aa25.53■■□□□ 1.68
EIF3B-201ENST00000360876 RAD54L2Q9Y4B4 1467 aa25.52■■□□□ 1.68
EIF3B-201ENST00000360876 SENP3-EIF4A1A0A087X0R7 540 aa25.52■■□□□ 1.68
EIF3B-201ENST00000360876 LRRC9Q6ZRR7 1453 aa25.52■■□□□ 1.68
EIF3B-201ENST00000360876 PPP1R15AO75807 674 aaPredicted RBP25.49■■□□□ 1.67
EIF3B-201ENST00000360876 MYT1Q01538 1121 aa25.48■■□□□ 1.67
EIF3B-201ENST00000360876 TIAM1Q13009 1591 aa25.48■■□□□ 1.67
EIF3B-201ENST00000360876 ANP32CO43423 234 aa25.48■■□□□ 1.67
EIF3B-201ENST00000360876 RRP7BPQ9NSQ0 103 aa25.46■■□□□ 1.67
EIF3B-201ENST00000360876 NEFLP07196 543 aa25.43■■□□□ 1.66
EIF3B-201ENST00000360876 FOXD1Q16676 465 aa25.42■■□□□ 1.66
EIF3B-201ENST00000360876 TONSLQ96HA7 1378 aa25.4■■□□□ 1.66
EIF3B-201ENST00000360876 CADPSQ9ULU8 1353 aa25.39■■□□□ 1.66
EIF3B-201ENST00000360876 PCF11O94913 1555 aaKnown RBP25.38■■□□□ 1.65
EIF3B-201ENST00000360876 HNRNPUQ00839 825 aaKnown RBP eCLIP25.37■■□□□ 1.65
EIF3B-201ENST00000360876 HMGXB3Q12766 1538 aa25.36■■□□□ 1.65
EIF3B-201ENST00000360876 NESP48681 1621 aa25.33■■□□□ 1.65
EIF3B-201ENST00000360876 DNAJC5BQ9UF47 199 aa25.33■■□□□ 1.65
EIF3B-201ENST00000360876 MTUS2Q5JR59 1369 aa25.32■■□□□ 1.64
EIF3B-201ENST00000360876 TDRD9Q8NDG6 1382 aaKnown RBP25.32■■□□□ 1.64
EIF3B-201ENST00000360876 PTPRKQ15262 1439 aa25.3■■□□□ 1.64
EIF3B-201ENST00000360876 ANP32EQ9BTT0 268 aa25.3■■□□□ 1.64
EIF3B-201ENST00000360876 RBM19Q9Y4C8 960 aaKnown RBP25.29■■□□□ 1.64
EIF3B-201ENST00000360876 CCDC184Q52MB2 194 aa25.28■■□□□ 1.64
EIF3B-201ENST00000360876 FHAD1B1AJZ9 1412 aa25.26■■□□□ 1.63
EIF3B-201ENST00000360876 POLR3GLQ9BT43 218 aa25.25■■□□□ 1.63
EIF3B-201ENST00000360876 FANCD2Q9BXW9 1451 aa25.23■■□□□ 1.63
EIF3B-201ENST00000360876 AQRO60306 1485 aaKnown RBP eCLIP25.22■■□□□ 1.634e-7■■■■□ 26.3
EIF3B-201ENST00000360876 FAM9BQ8IZU0 186 aa25.2■■□□□ 1.62
EIF3B-201ENST00000360876 CCDC18Q5T9S5 1454 aa25.18■■□□□ 1.62
EIF3B-201ENST00000360876 HSPA5P11021 654 aaKnown RBP25.17■■□□□ 1.62
EIF3B-201ENST00000360876 FGD6Q6ZV73 1430 aa25.16■■□□□ 1.62
EIF3B-201ENST00000360876 POLA1P09884 1462 aaPredicted RBP25.12■■□□□ 1.61
EIF3B-201ENST00000360876 C11orf95C9JLR9 678 aaPredicted RBP25.11■■□□□ 1.61
EIF3B-201ENST00000360876 WASHC2AQ641Q2 1341 aa25.1■■□□□ 1.61
EIF3B-201ENST00000360876 ZNF326Q5BKZ1 582 aaKnown RBP25.1■■□□□ 1.61
EIF3B-201ENST00000360876 CCER2I3L3R5 266 aa25.09■■□□□ 1.61
EIF3B-201ENST00000360876 MSH5O43196 834 aa25.06■■□□□ 1.6
EIF3B-201ENST00000360876 CASKIN1Q8WXD9 1431 aa25.06■■□□□ 1.6
EIF3B-201ENST00000360876 L3MBTL2Q969R5 705 aa25.03■■□□□ 1.6
EIF3B-201ENST00000360876 MAP3K1Q13233 1512 aa25.02■■□□□ 1.6
EIF3B-201ENST00000360876 TOPBP1Q92547 1522 aa25.02■■□□□ 1.6
EIF3B-201ENST00000360876 B4GALNT3Q6L9W6 998 aa25.01■■□□□ 1.6
EIF3B-201ENST00000360876 NAIPQ13075 1403 aa25.01■■□□□ 1.59
EIF3B-201ENST00000360876 NCOA2Q15596 1464 aa25■■□□□ 1.59
EIF3B-201ENST00000360876 FYCO1Q9BQS8 1478 aa25■■□□□ 1.59
EIF3B-201ENST00000360876 CC2D2AQ9P2K1 1620 aa25■■□□□ 1.59
EIF3B-201ENST00000360876 CFAP43Q8NDM7 1665 aa25■■□□□ 1.59
EIF3B-201ENST00000360876 ZNF644Q9H582 1327 aaPredicted RBP24.98■■□□□ 1.59
EIF3B-201ENST00000360876 TIMELESSQ9UNS1 1208 aa24.98■■□□□ 1.59
EIF3B-201ENST00000360876 MRS2Q9HD23 443 aa24.97■■□□□ 1.59
EIF3B-201ENST00000360876 UACAQ9BZF9 1416 aa24.96■■□□□ 1.59
EIF3B-201ENST00000360876 EIF4G2P78344 907 aaKnown RBP eCLIP24.94■■□□□ 1.581e-6■■■□□ 15.3
EIF3B-201ENST00000360876 FMN1Q68DA7 1419 aa24.94■■□□□ 1.58
EIF3B-201ENST00000360876 MPHOSPH9Q99550 1183 aa24.93■■□□□ 1.58
EIF3B-201ENST00000360876 HFM1A2PYH4 1435 aa24.93■■□□□ 1.58
EIF3B-201ENST00000360876 NBPF8Q3BBV2 869 aa24.92■■□□□ 1.58
EIF3B-201ENST00000360876 SNAPC4Q5SXM2 1469 aa24.91■■□□□ 1.58
EIF3B-201ENST00000360876 MYOM3Q5VTT5 1437 aa24.9■■□□□ 1.58
EIF3B-201ENST00000360876 PTPN23Q9H3S7 1636 aa24.9■■□□□ 1.58
EIF3B-201ENST00000360876 ZNF777Q9ULD5 760 aaPredicted RBP24.9■■□□□ 1.58
EIF3B-201ENST00000360876 ABCA10Q8WWZ4 1543 aa24.89■■□□□ 1.58
EIF3B-201ENST00000360876 CDK11AQ9UQ88 783 aaPredicted RBP24.87■■□□□ 1.57
EIF3B-201ENST00000360876 BCL11AQ9H165 835 aa24.86■■□□□ 1.57
EIF3B-201ENST00000360876 KDM6BO15054 1643 aa24.86■■□□□ 1.57
EIF3B-201ENST00000360876 MAGI3Q5TCQ9 1506 aa24.85■■□□□ 1.57
EIF3B-201ENST00000360876 URB2Q14146 1524 aaKnown RBP24.84■■□□□ 1.57
EIF3B-201ENST00000360876 DNMBPQ6XZF7 1577 aa24.83■■□□□ 1.57
EIF3B-201ENST00000360876 ERICH6Q7L0X2 663 aa24.82■■□□□ 1.56
EIF3B-201ENST00000360876 SLC4A1APQ9BWU0 796 aaKnown RBP24.82■■□□□ 1.56
EIF3B-201ENST00000360876 CDK13Q14004 1512 aaKnown RBP24.82■■□□□ 1.56
EIF3B-201ENST00000360876 SALL2Q9Y467 1007 aaPredicted RBP24.82■■□□□ 1.56
EIF3B-201ENST00000360876 PRDM2Q13029 1718 aa24.81■■□□□ 1.56
EIF3B-201ENST00000360876 LRRIQ1Q96JM4 1722 aa24.8■■□□□ 1.56
EIF3B-201ENST00000360876 PRKRIP1Q9H875 184 aaPredicted RBP24.8■■□□□ 1.56
EIF3B-201ENST00000360876 GAPVD1Q14C86 1478 aa24.8■■□□□ 1.56
EIF3B-201ENST00000360876 DENND4BO75064 1496 aaPredicted RBP24.79■■□□□ 1.56
EIF3B-201ENST00000360876 KDM5BQ9UGL1 1544 aa24.78■■□□□ 1.56
EIF3B-201ENST00000360876 EFCAB5A4FU69 1503 aa24.77■■□□□ 1.56
EIF3B-201ENST00000360876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.73■■□□□ 1.555e-6■■□□□ 13.9
EIF3B-201ENST00000360876 GRIN2BQ13224 1484 aa24.72■■□□□ 1.55
EIF3B-201ENST00000360876 KIF7Q2M1P5 1343 aa24.72■■□□□ 1.55
EIF3B-201ENST00000360876 FBLN2P98095 1184 aa24.72■■□□□ 1.55
EIF3B-201ENST00000360876 CTTNBP2Q8WZ74 1663 aa24.71■■□□□ 1.55
EIF3B-201ENST00000360876 KDM2AQ9Y2K7 1162 aa24.7■■□□□ 1.55
EIF3B-201ENST00000360876 PDS5BQ9NTI5 1447 aa24.7■■□□□ 1.54
EIF3B-201ENST00000360876 CCDC7Q96M83 1385 aa24.7■■□□□ 1.54
EIF3B-201ENST00000360876 NBR1Q14596 966 aa24.67■■□□□ 1.54
EIF3B-201ENST00000360876 CNTLNQ9NXG0 1405 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms