RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 NISCHQ9Y2I1 1504 aa25.2■■□□□ 1.62
PCMTD1-201ENST00000360540 DCAF8L2P0C7V8 631 aa25.09■■□□□ 1.61
PCMTD1-201ENST00000360540 SUPT5HO00267 1087 aaKnown RBP24.28■■□□□ 1.48
PCMTD1-201ENST00000360540 SHROOM4Q9ULL8 1493 aa24.16■■□□□ 1.46
PCMTD1-201ENST00000360540 EHMT2Q96KQ7 1210 aa23.39■■□□□ 1.34
PCMTD1-201ENST00000360540 FAM9AQ8IZU1 332 aaPredicted RBP22.85■■□□□ 1.25
PCMTD1-201ENST00000360540 PCGF6Q9BYE7 350 aa22.72■■□□□ 1.23
PCMTD1-201ENST00000360540 TTBK1Q5TCY1 1321 aaPredicted RBP22.54■■□□□ 1.2
PCMTD1-201ENST00000360540 TRIM41Q8WV44 630 aa22.26■■□□□ 1.15
PCMTD1-201ENST00000360540 RANGAP1P46060 587 aaPredicted RBP22.17■■□□□ 1.14
PCMTD1-201ENST00000360540 PPARGC1BQ86YN6 1023 aaKnown RBP22.12■■□□□ 1.13
PCMTD1-201ENST00000360540 LOC105371045A0A1W2PR82 267 aa22.1■■□□□ 1.13
PCMTD1-201ENST00000360540 CHIC1Q5VXU3 224 aa22.04■■□□□ 1.12
PCMTD1-201ENST00000360540 APLP2Q06481 763 aa21.94■■□□□ 1.1
PCMTD1-201ENST00000360540 UBTFP17480 764 aaKnown RBP21.8■■□□□ 1.08
PCMTD1-201ENST00000360540 CCER1Q8TC90 406 aaPredicted RBP21.8■■□□□ 1.08
PCMTD1-201ENST00000360540 HRCP23327 699 aa21.66■■□□□ 1.06
PCMTD1-201ENST00000360540 TRIM26Q12899 539 aaPredicted RBP21.58■■□□□ 1.05
PCMTD1-201ENST00000360540 ATP1B4Q9UN42 357 aaPredicted RBP21.55■■□□□ 1.04
PCMTD1-201ENST00000360540 ZEB1P37275 1124 aaPredicted RBP21.5■■□□□ 1.03
PCMTD1-201ENST00000360540 ABCC9O60706 1549 aa21.38■■□□□ 1.01
PCMTD1-201ENST00000360540 YTHDC1Q96MU7 727 aaKnown RBP21.38■■□□□ 1.01
PCMTD1-201ENST00000360540 PABPN1Q86U42 306 aaKnown RBP eCLIP21.29■■□□□ 1
PCMTD1-201ENST00000360540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.25■□□□□ 0.99
PCMTD1-201ENST00000360540 HNRNPUL2Q1KMD3 747 aaKnown RBP21.24■□□□□ 0.99
PCMTD1-201ENST00000360540 CENPBP07199 599 aaPredicted RBP21.22■□□□□ 0.99
PCMTD1-201ENST00000360540 ITGAEP38570 1179 aa21.22■□□□□ 0.99
PCMTD1-201ENST00000360540 PELP1Q8IZL8 1130 aaKnown RBP21.05■□□□□ 0.96
PCMTD1-201ENST00000360540 ZCCHC6Q5VYS8 1495 aaKnown RBP20.94■□□□□ 0.94
PCMTD1-201ENST00000360540 DIEXFQ68CQ4 756 aaKnown RBP20.76■□□□□ 0.91
PCMTD1-201ENST00000360540 MYO15BQ96JP2 1530 aa20.75■□□□□ 0.91
PCMTD1-201ENST00000360540 SCRIBQ14160 1630 aa20.72■□□□□ 0.91
PCMTD1-201ENST00000360540 CNGB1Q14028 1251 aaPredicted RBP20.7■□□□□ 0.9
PCMTD1-201ENST00000360540 CSRNP3Q8WYN3 585 aa20.59■□□□□ 0.89
PCMTD1-201ENST00000360540 POLR3GLQ9BT43 218 aa20.58■□□□□ 0.88
PCMTD1-201ENST00000360540 FAM50AQ14320 339 aaKnown RBP20.56■□□□□ 0.88
PCMTD1-201ENST00000360540 NEFLP07196 543 aa20.53■□□□□ 0.88
PCMTD1-201ENST00000360540 P3H3Q8IVL6 736 aa20.49■□□□□ 0.87
PCMTD1-201ENST00000360540 NEUROD1Q13562 356 aa20.49■□□□□ 0.87
PCMTD1-201ENST00000360540 GTF3C3Q9Y5Q9 886 aa20.41■□□□□ 0.86
PCMTD1-201ENST00000360540 ERICH6Q7L0X2 663 aa20.39■□□□□ 0.85
PCMTD1-201ENST00000360540 CCDC180Q9P1Z9 1646 aa20.36■□□□□ 0.85
PCMTD1-201ENST00000360540 ARID3CA6NKF2 412 aa20.35■□□□□ 0.85
PCMTD1-201ENST00000360540 RSF1Q96T23 1441 aaPredicted RBP20.35■□□□□ 0.85
PCMTD1-201ENST00000360540 DCAF1Q9Y4B6 1507 aa20.35■□□□□ 0.85
PCMTD1-201ENST00000360540 ZNF316A6NFI3 1004 aaPredicted RBP20.3■□□□□ 0.84
PCMTD1-201ENST00000360540 TRIM52Q96A61 297 aa20.25■□□□□ 0.83
PCMTD1-201ENST00000360540 MYT1LQ9UL68 1186 aa20.24■□□□□ 0.83
PCMTD1-201ENST00000360540 BCANQ96GW7 911 aa20.24■□□□□ 0.83
PCMTD1-201ENST00000360540 FBLN2P98095 1184 aa20.15■□□□□ 0.82
PCMTD1-201ENST00000360540 ACIN1Q9UKV3 1341 aaKnown RBP20.14■□□□□ 0.82
PCMTD1-201ENST00000360540 ZNF326Q5BKZ1 582 aaKnown RBP20.1■□□□□ 0.81
PCMTD1-201ENST00000360540 CECR2Q9BXF3 1484 aa20.1■□□□□ 0.81
PCMTD1-201ENST00000360540 HIRIP3Q9BW71 556 aaPredicted RBP19.93■□□□□ 0.78
PCMTD1-201ENST00000360540 SCAF1Q9H7N4 1312 aaKnown RBP19.93■□□□□ 0.78
PCMTD1-201ENST00000360540 ANP32CO43423 234 aa19.92■□□□□ 0.78
PCMTD1-201ENST00000360540 CEP162Q5TB80 1403 aa19.9■□□□□ 0.78
PCMTD1-201ENST00000360540 MIER1Q8N108 512 aa19.9■□□□□ 0.78
PCMTD1-201ENST00000360540 DDX10Q13206 875 aaKnown RBP19.89■□□□□ 0.77
PCMTD1-201ENST00000360540 ZNF777Q9ULD5 760 aaPredicted RBP19.89■□□□□ 0.77
PCMTD1-201ENST00000360540 CLIP1P30622 1438 aa19.88■□□□□ 0.77
PCMTD1-201ENST00000360540 SLC4A1APQ9BWU0 796 aaKnown RBP19.86■□□□□ 0.77
PCMTD1-201ENST00000360540 CHIC2Q9UKJ5 165 aa19.85■□□□□ 0.77
PCMTD1-201ENST00000360540 RB1CC1Q8TDY2 1594 aa19.82■□□□□ 0.76
PCMTD1-201ENST00000360540 SOGA1O94964 1423 aa19.79■□□□□ 0.76
PCMTD1-201ENST00000360540 WRNQ14191 1432 aaPredicted RBP eCLIP19.78■□□□□ 0.76
PCMTD1-201ENST00000360540 MROH2BQ7Z745 1585 aa19.75■□□□□ 0.75
PCMTD1-201ENST00000360540 NACADO15069 1562 aa19.71■□□□□ 0.75
PCMTD1-201ENST00000360540 GOLGA3Q08378 1498 aa19.67■□□□□ 0.74
PCMTD1-201ENST00000360540 FKBP8Q14318 412 aa19.66■□□□□ 0.74
PCMTD1-201ENST00000360540 TONSLQ96HA7 1378 aa19.66■□□□□ 0.74
PCMTD1-201ENST00000360540 TNIKQ9UKE5 1360 aa19.65■□□□□ 0.74
PCMTD1-201ENST00000360540 ABCC8Q09428 1581 aa19.64■□□□□ 0.73
PCMTD1-201ENST00000360540 MYT1Q01538 1121 aa19.63■□□□□ 0.73
PCMTD1-201ENST00000360540 CCDC88BA6NC98 1476 aa19.61■□□□□ 0.73
PCMTD1-201ENST00000360540 HNRNPUQ00839 825 aaKnown RBP eCLIP19.6■□□□□ 0.73
PCMTD1-201ENST00000360540 RRP7BPQ9NSQ0 103 aa19.6■□□□□ 0.73
PCMTD1-201ENST00000360540 BAZ1BQ9UIG0 1483 aaKnown RBP19.6■□□□□ 0.73
PCMTD1-201ENST00000360540 FAM9BQ8IZU0 186 aa19.58■□□□□ 0.72
PCMTD1-201ENST00000360540 BAZ1AQ9NRL2 1556 aaPredicted RBP19.58■□□□□ 0.72
PCMTD1-201ENST00000360540 DAXXQ9UER7 740 aaPredicted RBP19.58■□□□□ 0.72
PCMTD1-201ENST00000360540 SENP3-EIF4A1A0A087X0R7 540 aa19.57■□□□□ 0.72
PCMTD1-201ENST00000360540 MTUS2Q5JR59 1369 aa19.56■□□□□ 0.72
PCMTD1-201ENST00000360540 EEA1Q15075 1411 aa19.55■□□□□ 0.72
PCMTD1-201ENST00000360540 SIN3AQ96ST3 1273 aa19.55■□□□□ 0.72
PCMTD1-201ENST00000360540 SALL2Q9Y467 1007 aaPredicted RBP19.55■□□□□ 0.72
PCMTD1-201ENST00000360540 IRX6P78412 446 aaPredicted RBP19.52■□□□□ 0.71
PCMTD1-201ENST00000360540 CLSPNQ9HAW4 1339 aa19.51■□□□□ 0.71
PCMTD1-201ENST00000360540 CDK11AQ9UQ88 783 aaPredicted RBP19.51■□□□□ 0.71
PCMTD1-201ENST00000360540 KANK4Q5T7N3 995 aaPredicted RBP19.48■□□□□ 0.71
PCMTD1-201ENST00000360540 CEP164Q9UPV0 1460 aa19.48■□□□□ 0.71
PCMTD1-201ENST00000360540 WIZO95785 1651 aa19.47■□□□□ 0.71
PCMTD1-201ENST00000360540 KDM2AQ9Y2K7 1162 aa19.46■□□□□ 0.71
PCMTD1-201ENST00000360540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.45■□□□□ 0.7
PCMTD1-201ENST00000360540 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
PCMTD1-201ENST00000360540 BCL11AQ9H165 835 aa19.4■□□□□ 0.7
PCMTD1-201ENST00000360540 RUSC2Q8N2Y8 1516 aa19.36■□□□□ 0.69
PCMTD1-201ENST00000360540 CHMP7Q8WUX9 453 aaPredicted RBP19.36■□□□□ 0.69
PCMTD1-201ENST00000360540 MRS2Q9HD23 443 aa19.34■□□□□ 0.69
PCMTD1-201ENST00000360540 RTL5Q5HYW3 569 aaPredicted RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms