RNA–Protein interactions for RNA: ENST00000359308.8

XRCC6-201, Transcript of X-ray repair cross complementing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC6, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-201ENST00000359308 NISCHQ9Y2I1 1504 aa29.31■■■□□ 2.28
XRCC6-201ENST00000359308 CCDC180Q9P1Z9 1646 aa25.07■■□□□ 1.6
XRCC6-201ENST00000359308 SHROOM4Q9ULL8 1493 aa24.83■■□□□ 1.56
XRCC6-201ENST00000359308 ZCCHC6Q5VYS8 1495 aaKnown RBP24.74■■□□□ 1.55
XRCC6-201ENST00000359308 DCAF8L2P0C7V8 631 aa24.39■■□□□ 1.5
XRCC6-201ENST00000359308 SUPT5HO00267 1087 aaKnown RBP24.16■■□□□ 1.46
XRCC6-201ENST00000359308 DCAF1Q9Y4B6 1507 aa24.01■■□□□ 1.43
XRCC6-201ENST00000359308 ABCC9O60706 1549 aa23.51■■□□□ 1.35
XRCC6-201ENST00000359308 SCRIBQ14160 1630 aa23.5■■□□□ 1.35
XRCC6-201ENST00000359308 MYO15BQ96JP2 1530 aa23.42■■□□□ 1.34
XRCC6-201ENST00000359308 CHIC1Q5VXU3 224 aa23.32■■□□□ 1.32
XRCC6-201ENST00000359308 NACADO15069 1562 aa23.22■■□□□ 1.31
XRCC6-201ENST00000359308 RSF1Q96T23 1441 aaPredicted RBP23.08■■□□□ 1.29
XRCC6-201ENST00000359308 RB1CC1Q8TDY2 1594 aa22.92■■□□□ 1.26
XRCC6-201ENST00000359308 CECR2Q9BXF3 1484 aa22.92■■□□□ 1.26
XRCC6-201ENST00000359308 MROH2BQ7Z745 1585 aa22.8■■□□□ 1.24
XRCC6-201ENST00000359308 WIZO95785 1651 aa22.68■■□□□ 1.22
XRCC6-201ENST00000359308 UNC13AQ9UPW8 1703 aa22.66■■□□□ 1.22
XRCC6-201ENST00000359308 LOC105371045A0A1W2PR82 267 aa22.65■■□□□ 1.22
XRCC6-201ENST00000359308 BAZ1AQ9NRL2 1556 aaPredicted RBP22.53■■□□□ 1.2
XRCC6-201ENST00000359308 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
XRCC6-201ENST00000359308 PABPN1Q86U42 306 aaKnown RBP eCLIP22.41■■□□□ 1.18
XRCC6-201ENST00000359308 SMARCA4P51532 1647 aa22.41■■□□□ 1.18
XRCC6-201ENST00000359308 FAM9AQ8IZU1 332 aaPredicted RBP22.36■■□□□ 1.17
XRCC6-201ENST00000359308 BICRAQ9NZM4 1560 aa22.35■■□□□ 1.17
XRCC6-201ENST00000359308 PCGF6Q9BYE7 350 aa22.3■■□□□ 1.16
XRCC6-201ENST00000359308 TOP2AP11388 1531 aaKnown RBP22.29■■□□□ 1.16
XRCC6-201ENST00000359308 EIF4G1Q04637 1599 aaKnown RBP22.24■■□□□ 1.15
XRCC6-201ENST00000359308 EHMT2Q96KQ7 1210 aa22.21■■□□□ 1.15
XRCC6-201ENST00000359308 CCDC88BA6NC98 1476 aa22.18■■□□□ 1.14
XRCC6-201ENST00000359308 SMARCA2P51531 1590 aa22.17■■□□□ 1.14
XRCC6-201ENST00000359308 ABCC8Q09428 1581 aa22.08■■□□□ 1.12
XRCC6-201ENST00000359308 HRCP23327 699 aa22.06■■□□□ 1.12
XRCC6-201ENST00000359308 PEG3Q9GZU2 1588 aa21.96■■□□□ 1.11
XRCC6-201ENST00000359308 TRIM26Q12899 539 aaPredicted RBP21.9■■□□□ 1.1
XRCC6-201ENST00000359308 ATAD2BQ9ULI0 1458 aa21.88■■□□□ 1.09
XRCC6-201ENST00000359308 BAZ1BQ9UIG0 1483 aaKnown RBP21.82■■□□□ 1.08
XRCC6-201ENST00000359308 SOGA1O94964 1423 aa21.78■■□□□ 1.08
XRCC6-201ENST00000359308 PPARGC1BQ86YN6 1023 aaKnown RBP21.73■■□□□ 1.07
XRCC6-201ENST00000359308 RUSC2Q8N2Y8 1516 aa21.7■■□□□ 1.06
XRCC6-201ENST00000359308 WRNQ14191 1432 aaPredicted RBP eCLIP21.69■■□□□ 1.06
XRCC6-201ENST00000359308 SYNJ1O43426 1573 aa21.64■■□□□ 1.06
XRCC6-201ENST00000359308 CSRNP3Q8WYN3 585 aa21.57■■□□□ 1.04
XRCC6-201ENST00000359308 EEA1Q15075 1411 aa21.54■■□□□ 1.04
XRCC6-201ENST00000359308 CEP162Q5TB80 1403 aa21.53■■□□□ 1.04
XRCC6-201ENST00000359308 UBTFP17480 764 aaKnown RBP21.48■■□□□ 1.03
XRCC6-201ENST00000359308 NCAPD3P42695 1498 aa21.48■■□□□ 1.03
XRCC6-201ENST00000359308 HMGXB3Q12766 1538 aa21.48■■□□□ 1.03
XRCC6-201ENST00000359308 TNIKQ9UKE5 1360 aa21.46■■□□□ 1.03
XRCC6-201ENST00000359308 GOLGA3Q08378 1498 aa21.43■■□□□ 1.02
XRCC6-201ENST00000359308 TTBK1Q5TCY1 1321 aaPredicted RBP21.42■■□□□ 1.02
XRCC6-201ENST00000359308 TOP2BQ02880 1626 aa21.37■■□□□ 1.01
XRCC6-201ENST00000359308 CEP164Q9UPV0 1460 aa21.33■■□□□ 1.01
XRCC6-201ENST00000359308 KIF21BO75037 1637 aa21.32■■□□□ 1
XRCC6-201ENST00000359308 BIVM-ERCC5R4GMW8 1640 aa21.3■■□□□ 1
XRCC6-201ENST00000359308 RAPGEF2Q9Y4G8 1499 aa21.27■■□□□ 1
XRCC6-201ENST00000359308 CFTRP13569 1480 aa21.25■□□□□ 0.99
XRCC6-201ENST00000359308 CUX1P39880 1505 aa21.25■□□□□ 0.99
XRCC6-201ENST00000359308 ZEB1P37275 1124 aaPredicted RBP21.22■□□□□ 0.99
XRCC6-201ENST00000359308 RANGAP1P46060 587 aaPredicted RBP21.2■□□□□ 0.98
XRCC6-201ENST00000359308 CLIP1P30622 1438 aa21.18■□□□□ 0.98
XRCC6-201ENST00000359308 CC2D2AQ9P2K1 1620 aa21.17■□□□□ 0.98
XRCC6-201ENST00000359308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.16■□□□□ 0.98
XRCC6-201ENST00000359308 PRDM2Q13029 1718 aa21.11■□□□□ 0.97
XRCC6-201ENST00000359308 PRXQ9BXM0 1461 aa21.06■□□□□ 0.96
XRCC6-201ENST00000359308 CADPSQ9ULU8 1353 aa21.06■□□□□ 0.96
XRCC6-201ENST00000359308 CCER1Q8TC90 406 aaPredicted RBP21.05■□□□□ 0.96
XRCC6-201ENST00000359308 VPS8Q8N3P4 1428 aa21.04■□□□□ 0.96
XRCC6-201ENST00000359308 KIF27Q86VH2 1401 aa21.03■□□□□ 0.96
XRCC6-201ENST00000359308 ERICH3Q5RHP9 1530 aa21.02■□□□□ 0.96
XRCC6-201ENST00000359308 CUX2O14529 1486 aa20.93■□□□□ 0.94
XRCC6-201ENST00000359308 FGD5Q6ZNL6 1462 aa20.91■□□□□ 0.94
XRCC6-201ENST00000359308 ARAP1Q96P48 1450 aa20.9■□□□□ 0.94
XRCC6-201ENST00000359308 APLP2Q06481 763 aa20.89■□□□□ 0.93
XRCC6-201ENST00000359308 FANCD2Q9BXW9 1451 aa20.88■□□□□ 0.93
XRCC6-201ENST00000359308 NESP48681 1621 aa20.87■□□□□ 0.93
XRCC6-201ENST00000359308 HNRNPUL2Q1KMD3 747 aaKnown RBP20.84■□□□□ 0.93
XRCC6-201ENST00000359308 IGF1RP08069 1367 aa20.83■□□□□ 0.92
XRCC6-201ENST00000359308 ARHGAP35Q9NRY4 1499 aa20.76■□□□□ 0.91
XRCC6-201ENST00000359308 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
XRCC6-201ENST00000359308 DNAJC5BQ9UF47 199 aa20.75■□□□□ 0.91
XRCC6-201ENST00000359308 CARMIL1Q5VZK9 1371 aa20.73■□□□□ 0.91
XRCC6-201ENST00000359308 DNMBPQ6XZF7 1577 aa20.73■□□□□ 0.91
XRCC6-201ENST00000359308 KANK4Q5T7N3 995 aaPredicted RBP20.73■□□□□ 0.91
XRCC6-201ENST00000359308 TOPBP1Q92547 1522 aa20.72■□□□□ 0.91
XRCC6-201ENST00000359308 POLA1P09884 1462 aaPredicted RBP20.7■□□□□ 0.9
XRCC6-201ENST00000359308 LAMC3Q9Y6N6 1575 aa20.63■□□□□ 0.89
XRCC6-201ENST00000359308 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
XRCC6-201ENST00000359308 URB2Q14146 1524 aaKnown RBP20.62■□□□□ 0.89
XRCC6-201ENST00000359308 P3H3Q8IVL6 736 aa20.55■□□□□ 0.88
XRCC6-201ENST00000359308 KIF21AQ7Z4S6 1674 aa20.53■□□□□ 0.88
XRCC6-201ENST00000359308 WDR97A6NE52 1622 aa20.51■□□□□ 0.87
XRCC6-201ENST00000359308 TDRD9Q8NDG6 1382 aaKnown RBP20.5■□□□□ 0.87
XRCC6-201ENST00000359308 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
XRCC6-201ENST00000359308 RRBP1Q9P2E9 1410 aaKnown RBP20.49■□□□□ 0.87
XRCC6-201ENST00000359308 TIAM1Q13009 1591 aa20.48■□□□□ 0.87
XRCC6-201ENST00000359308 CUL7Q14999 1698 aa20.48■□□□□ 0.87
XRCC6-201ENST00000359308 FHOD3Q2V2M9 1422 aa20.46■□□□□ 0.87
XRCC6-201ENST00000359308 PCF11O94913 1555 aaKnown RBP20.45■□□□□ 0.86
XRCC6-201ENST00000359308 CCNB3Q8WWL7 1395 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms