RNA–Protein interactions for RNA: ENST00000359003.6

NCOA6-201, Transcript of nuclear receptor coactivator 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCOA6, Length 7,081 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA6-201ENST00000359003 NISCHQ9Y2I1 1504 aa19.45■□□□□ 0.7
NCOA6-201ENST00000359003 SUPT5HO00267 1087 aaKnown RBP18.85■□□□□ 0.61
NCOA6-201ENST00000359003 DCAF8L2P0C7V8 631 aa18.75■□□□□ 0.59
NCOA6-201ENST00000359003 SHROOM4Q9ULL8 1493 aa18.57■□□□□ 0.56
NCOA6-201ENST00000359003 PCGF6Q9BYE7 350 aa18.2■□□□□ 0.5
NCOA6-201ENST00000359003 EHMT2Q96KQ7 1210 aa17.87■□□□□ 0.45
NCOA6-201ENST00000359003 HRCP23327 699 aa17.86■□□□□ 0.45
NCOA6-201ENST00000359003 PPARGC1BQ86YN6 1023 aaKnown RBP17.66■□□□□ 0.42
NCOA6-201ENST00000359003 FAM9AQ8IZU1 332 aaPredicted RBP17.65■□□□□ 0.42
NCOA6-201ENST00000359003 CHIC1Q5VXU3 224 aa17.6■□□□□ 0.41
NCOA6-201ENST00000359003 LOC105371045A0A1W2PR82 267 aa17.45■□□□□ 0.38
NCOA6-201ENST00000359003 PELP1Q8IZL8 1130 aaKnown RBP17.44■□□□□ 0.38
NCOA6-201ENST00000359003 ZEB1P37275 1124 aaPredicted RBP17.42■□□□□ 0.38
NCOA6-201ENST00000359003 TRIM26Q12899 539 aaPredicted RBP17.35■□□□□ 0.37
NCOA6-201ENST00000359003 TTBK1Q5TCY1 1321 aaPredicted RBP17.34■□□□□ 0.37
NCOA6-201ENST00000359003 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
NCOA6-201ENST00000359003 CCER1Q8TC90 406 aaPredicted RBP17.24■□□□□ 0.35
NCOA6-201ENST00000359003 CENPBP07199 599 aaPredicted RBP17.22■□□□□ 0.35
NCOA6-201ENST00000359003 YTHDC1Q96MU7 727 aaKnown RBP17.02■□□□□ 0.32
NCOA6-201ENST00000359003 APLP2Q06481 763 aa16.92■□□□□ 0.3
NCOA6-201ENST00000359003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.88■□□□□ 0.29
NCOA6-201ENST00000359003 MYT1Q01538 1121 aa16.84■□□□□ 0.29
NCOA6-201ENST00000359003 RANGAP1P46060 587 aaPredicted RBP16.8■□□□□ 0.28
NCOA6-201ENST00000359003 UBTFP17480 764 aaKnown RBP16.79■□□□□ 0.28
NCOA6-201ENST00000359003 DIEXFQ68CQ4 756 aaKnown RBP16.74■□□□□ 0.27
NCOA6-201ENST00000359003 GTF3C3Q9Y5Q9 886 aa16.73■□□□□ 0.27
NCOA6-201ENST00000359003 MYO15BQ96JP2 1530 aa16.65■□□□□ 0.26
NCOA6-201ENST00000359003 ACIN1Q9UKV3 1341 aaKnown RBP16.64■□□□□ 0.25
NCOA6-201ENST00000359003 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
NCOA6-201ENST00000359003 HNRNPUL2Q1KMD3 747 aaKnown RBP16.6■□□□□ 0.25
NCOA6-201ENST00000359003 DCAF1Q9Y4B6 1507 aa16.53■□□□□ 0.24
NCOA6-201ENST00000359003 NEUROD1Q13562 356 aa16.51■□□□□ 0.23
NCOA6-201ENST00000359003 NEFLP07196 543 aa16.36■□□□□ 0.21
NCOA6-201ENST00000359003 ZNF316A6NFI3 1004 aaPredicted RBP16.36■□□□□ 0.21
NCOA6-201ENST00000359003 ERICH6Q7L0X2 663 aa16.34■□□□□ 0.21
NCOA6-201ENST00000359003 ITGAEP38570 1179 aa16.31■□□□□ 0.2
NCOA6-201ENST00000359003 ZCCHC6Q5VYS8 1495 aaKnown RBP16.29■□□□□ 0.2
NCOA6-201ENST00000359003 ATP1B4Q9UN42 357 aaPredicted RBP16.25■□□□□ 0.19
NCOA6-201ENST00000359003 BCANQ96GW7 911 aa16.19■□□□□ 0.18
NCOA6-201ENST00000359003 CSRNP3Q8WYN3 585 aa16.09■□□□□ 0.17
NCOA6-201ENST00000359003 MIER1Q8N108 512 aa16.09■□□□□ 0.17
NCOA6-201ENST00000359003 RSF1Q96T23 1441 aaPredicted RBP15.89■□□□□ 0.13
NCOA6-201ENST00000359003 CNGB1Q14028 1251 aaPredicted RBP15.87■□□□□ 0.13
NCOA6-201ENST00000359003 CCDC180Q9P1Z9 1646 aa15.86■□□□□ 0.13
NCOA6-201ENST00000359003 FKBP8Q14318 412 aa15.83■□□□□ 0.12
NCOA6-201ENST00000359003 FAM50AQ14320 339 aaKnown RBP15.82■□□□□ 0.12
NCOA6-201ENST00000359003 PABPN1Q86U42 306 aaKnown RBP eCLIP15.8■□□□□ 0.12
NCOA6-201ENST00000359003 ABCC9O60706 1549 aa15.79■□□□□ 0.12
NCOA6-201ENST00000359003 POLR3GLQ9BT43 218 aa15.77■□□□□ 0.12
NCOA6-201ENST00000359003 ANP32CO43423 234 aa15.76■□□□□ 0.11
NCOA6-201ENST00000359003 CLSPNQ9HAW4 1339 aa15.75■□□□□ 0.11
NCOA6-201ENST00000359003 DDX10Q13206 875 aaKnown RBP15.75■□□□□ 0.11
NCOA6-201ENST00000359003 TRIM52Q96A61 297 aa15.7■□□□□ 0.1
NCOA6-201ENST00000359003 CEP162Q5TB80 1403 aa15.69■□□□□ 0.1
NCOA6-201ENST00000359003 CDK11AQ9UQ88 783 aaPredicted RBP15.69■□□□□ 0.1
NCOA6-201ENST00000359003 SUPT16HQ9Y5B9 1047 aaKnown RBP15.64■□□□□ 0.09
NCOA6-201ENST00000359003 ANP32EQ9BTT0 268 aa15.63■□□□□ 0.09
NCOA6-201ENST00000359003 RTL5Q5HYW3 569 aaPredicted RBP15.62■□□□□ 0.09
NCOA6-201ENST00000359003 HIRIP3Q9BW71 556 aaPredicted RBP15.61■□□□□ 0.09
NCOA6-201ENST00000359003 SCRIBQ14160 1630 aa15.61■□□□□ 0.09
NCOA6-201ENST00000359003 P3H3Q8IVL6 736 aa15.58■□□□□ 0.08
NCOA6-201ENST00000359003 CLIP1P30622 1438 aa15.57■□□□□ 0.08
NCOA6-201ENST00000359003 TNIKQ9UKE5 1360 aa15.57■□□□□ 0.08
NCOA6-201ENST00000359003 HNRNPUQ00839 825 aaKnown RBP eCLIP15.56■□□□□ 0.08
NCOA6-201ENST00000359003 IRX6P78412 446 aaPredicted RBP15.53■□□□□ 0.08
NCOA6-201ENST00000359003 CECR2Q9BXF3 1484 aa15.49■□□□□ 0.07
NCOA6-201ENST00000359003 DAXXQ9UER7 740 aaPredicted RBP15.48■□□□□ 0.07
NCOA6-201ENST00000359003 SOGA1O94964 1423 aa15.46■□□□□ 0.07
NCOA6-201ENST00000359003 TSHZ2Q9NRE2 1034 aa15.46■□□□□ 0.06
NCOA6-201ENST00000359003 ZNF326Q5BKZ1 582 aaKnown RBP15.43■□□□□ 0.06
NCOA6-201ENST00000359003 FAM9BQ8IZU0 186 aa15.41■□□□□ 0.06
NCOA6-201ENST00000359003 EEA1Q15075 1411 aa15.41■□□□□ 0.06
NCOA6-201ENST00000359003 TONSLQ96HA7 1378 aa15.4■□□□□ 0.06
NCOA6-201ENST00000359003 GOLGA3Q08378 1498 aa15.4■□□□□ 0.06
NCOA6-201ENST00000359003 BCL11AQ9H165 835 aa15.39■□□□□ 0.05
NCOA6-201ENST00000359003 SIN3AQ96ST3 1273 aa15.39■□□□□ 0.05
NCOA6-201ENST00000359003 NBR1Q14596 966 aa15.35■□□□□ 0.05
NCOA6-201ENST00000359003 RB1CC1Q8TDY2 1594 aa15.34■□□□□ 0.05
NCOA6-201ENST00000359003 RBM19Q9Y4C8 960 aaKnown RBP15.34■□□□□ 0.05
NCOA6-201ENST00000359003 ANP32AP39687 249 aaKnown RBP15.34■□□□□ 0.05
NCOA6-201ENST00000359003 NPM2Q86SE8 214 aaKnown RBP15.33■□□□□ 0.05
NCOA6-201ENST00000359003 WRNQ14191 1432 aaPredicted RBP eCLIP15.32■□□□□ 0.04
NCOA6-201ENST00000359003 ARID3CA6NKF2 412 aa15.31■□□□□ 0.04
NCOA6-201ENST00000359003 CCDC88BA6NC98 1476 aa15.3■□□□□ 0.04
NCOA6-201ENST00000359003 MRS2Q9HD23 443 aa15.3■□□□□ 0.04
NCOA6-201ENST00000359003 KCNH8Q96L42 1107 aa15.29■□□□□ 0.04
NCOA6-201ENST00000359003 KANK4Q5T7N3 995 aaPredicted RBP15.28■□□□□ 0.04
NCOA6-201ENST00000359003 CHIC2Q9UKJ5 165 aa15.25■□□□□ 0.03
NCOA6-201ENST00000359003 CCDC136Q96JN2 1154 aa15.25■□□□□ 0.03
NCOA6-201ENST00000359003 SENP3-EIF4A1A0A087X0R7 540 aa15.24■□□□□ 0.03
NCOA6-201ENST00000359003 CEP164Q9UPV0 1460 aa15.23■□□□□ 0.03
NCOA6-201ENST00000359003 MROH2BQ7Z745 1585 aa15.23■□□□□ 0.03
NCOA6-201ENST00000359003 MYT1LQ9UL68 1186 aa15.22■□□□□ 0.03
NCOA6-201ENST00000359003 VPS8Q8N3P4 1428 aa15.2■□□□□ 0.02
NCOA6-201ENST00000359003 ZBTB47Q9UFB7 747 aaPredicted RBP15.2■□□□□ 0.02
NCOA6-201ENST00000359003 SALL2Q9Y467 1007 aaPredicted RBP15.2■□□□□ 0.02
NCOA6-201ENST00000359003 CCNB3Q8WWL7 1395 aa15.15■□□□□ 0.02
NCOA6-201ENST00000359003 EIF4G2P78344 907 aaKnown RBP eCLIP15.15■□□□□ 0.02
NCOA6-201ENST00000359003 B4GALNT3Q6L9W6 998 aa15.15■□□□□ 0.02
NCOA6-201ENST00000359003 ABCC8Q09428 1581 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms