RNA–Protein interactions for RNA: ENST00000358015.7

RAD23B-201, Transcript of RAD23 homolog B, nucleotide excision repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD23B, Length 4,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23B-201ENST00000358015 NISCHQ9Y2I1 1504 aa29.18■■■□□ 2.26
RAD23B-201ENST00000358015 DCAF8L2P0C7V8 631 aa27.08■■□□□ 1.93
RAD23B-201ENST00000358015 SUPT5HO00267 1087 aaKnown RBP27.01■■□□□ 1.91
RAD23B-201ENST00000358015 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
RAD23B-201ENST00000358015 PCGF6Q9BYE7 350 aa25.8■■□□□ 1.72
RAD23B-201ENST00000358015 EHMT2Q96KQ7 1210 aa25.46■■□□□ 1.67
RAD23B-201ENST00000358015 HRCP23327 699 aa25.3■■□□□ 1.64
RAD23B-201ENST00000358015 CHIC1Q5VXU3 224 aa25.29■■□□□ 1.64
RAD23B-201ENST00000358015 FAM9AQ8IZU1 332 aaPredicted RBP25.22■■□□□ 1.63
RAD23B-201ENST00000358015 LOC105371045A0A1W2PR82 267 aa24.99■■□□□ 1.59
RAD23B-201ENST00000358015 TRIM41Q8WV44 630 aa24.97■■□□□ 1.59
RAD23B-201ENST00000358015 PPARGC1BQ86YN6 1023 aaKnown RBP24.9■■□□□ 1.58
RAD23B-201ENST00000358015 ZEB1P37275 1124 aaPredicted RBP24.84■■□□□ 1.57
RAD23B-201ENST00000358015 TRIM26Q12899 539 aaPredicted RBP24.84■■□□□ 1.57
RAD23B-201ENST00000358015 TTBK1Q5TCY1 1321 aaPredicted RBP24.67■■□□□ 1.54
RAD23B-201ENST00000358015 CCER1Q8TC90 406 aaPredicted RBP24.54■■□□□ 1.52
RAD23B-201ENST00000358015 ZCCHC6Q5VYS8 1495 aaKnown RBP24.47■■□□□ 1.51
RAD23B-201ENST00000358015 PELP1Q8IZL8 1130 aaKnown RBP24.32■■□□□ 1.48
RAD23B-201ENST00000358015 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
RAD23B-201ENST00000358015 CENPBP07199 599 aaPredicted RBP24.29■■□□□ 1.48
RAD23B-201ENST00000358015 APLP2Q06481 763 aa24.27■■□□□ 1.48
RAD23B-201ENST00000358015 UBTFP17480 764 aaKnown RBP24.16■■□□□ 1.46
RAD23B-201ENST00000358015 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
RAD23B-201ENST00000358015 RANGAP1P46060 587 aaPredicted RBP24.06■■□□□ 1.44
RAD23B-201ENST00000358015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.04■■□□□ 1.44
RAD23B-201ENST00000358015 CCDC180Q9P1Z9 1646 aa23.97■■□□□ 1.43
RAD23B-201ENST00000358015 YTHDC1Q96MU7 727 aaKnown RBP23.96■■□□□ 1.43
RAD23B-201ENST00000358015 DIEXFQ68CQ4 756 aaKnown RBP23.78■■□□□ 1.4
RAD23B-201ENST00000358015 HNRNPUL2Q1KMD3 747 aaKnown RBP23.69■■□□□ 1.38
RAD23B-201ENST00000358015 ABCC9O60706 1549 aa23.62■■□□□ 1.37
RAD23B-201ENST00000358015 SCRIBQ14160 1630 aa23.58■■□□□ 1.37
RAD23B-201ENST00000358015 GTF3C3Q9Y5Q9 886 aa23.53■■□□□ 1.36
RAD23B-201ENST00000358015 ACIN1Q9UKV3 1341 aaKnown RBP23.48■■□□□ 1.35
RAD23B-201ENST00000358015 RSF1Q96T23 1441 aaPredicted RBP23.47■■□□□ 1.35
RAD23B-201ENST00000358015 MYT1Q01538 1121 aa23.45■■□□□ 1.34
RAD23B-201ENST00000358015 SCAF1Q9H7N4 1312 aaKnown RBP23.41■■□□□ 1.34
RAD23B-201ENST00000358015 ATP1B4Q9UN42 357 aaPredicted RBP23.37■■□□□ 1.33
RAD23B-201ENST00000358015 ZNF316A6NFI3 1004 aaPredicted RBP23.33■■□□□ 1.32
RAD23B-201ENST00000358015 ITGAEP38570 1179 aa23.32■■□□□ 1.32
RAD23B-201ENST00000358015 CSRNP3Q8WYN3 585 aa23.3■■□□□ 1.32
RAD23B-201ENST00000358015 NEUROD1Q13562 356 aa23.27■■□□□ 1.32
RAD23B-201ENST00000358015 PABPN1Q86U42 306 aaKnown RBP eCLIP23.24■■□□□ 1.31
RAD23B-201ENST00000358015 NEFLP07196 543 aa23.12■■□□□ 1.29
RAD23B-201ENST00000358015 RB1CC1Q8TDY2 1594 aa23.03■■□□□ 1.28
RAD23B-201ENST00000358015 CECR2Q9BXF3 1484 aa22.96■■□□□ 1.27
RAD23B-201ENST00000358015 ERICH6Q7L0X2 663 aa22.91■■□□□ 1.26
RAD23B-201ENST00000358015 CEP162Q5TB80 1403 aa22.9■■□□□ 1.26
RAD23B-201ENST00000358015 MIER1Q8N108 512 aa22.85■■□□□ 1.25
RAD23B-201ENST00000358015 FAM50AQ14320 339 aaKnown RBP22.8■■□□□ 1.24
RAD23B-201ENST00000358015 MROH2BQ7Z745 1585 aa22.75■■□□□ 1.23
RAD23B-201ENST00000358015 BCANQ96GW7 911 aa22.75■■□□□ 1.23
RAD23B-201ENST00000358015 TNIKQ9UKE5 1360 aa22.74■■□□□ 1.23
RAD23B-201ENST00000358015 NACADO15069 1562 aa22.73■■□□□ 1.23
RAD23B-201ENST00000358015 CLIP1P30622 1438 aa22.69■■□□□ 1.22
RAD23B-201ENST00000358015 EEA1Q15075 1411 aa22.68■■□□□ 1.22
RAD23B-201ENST00000358015 GOLGA3Q08378 1498 aa22.65■■□□□ 1.22
RAD23B-201ENST00000358015 SOGA1O94964 1423 aa22.64■■□□□ 1.21
RAD23B-201ENST00000358015 BAZ1AQ9NRL2 1556 aaPredicted RBP22.59■■□□□ 1.21
RAD23B-201ENST00000358015 WRNQ14191 1432 aaPredicted RBP eCLIP22.56■■□□□ 1.2
RAD23B-201ENST00000358015 CCDC88BA6NC98 1476 aa22.55■■□□□ 1.2
RAD23B-201ENST00000358015 ABCC8Q09428 1581 aa22.54■■□□□ 1.2
RAD23B-201ENST00000358015 ANP32CO43423 234 aa22.52■■□□□ 1.2
RAD23B-201ENST00000358015 P3H3Q8IVL6 736 aa22.52■■□□□ 1.2
RAD23B-201ENST00000358015 WIZO95785 1651 aa22.51■■□□□ 1.19
RAD23B-201ENST00000358015 CLSPNQ9HAW4 1339 aa22.48■■□□□ 1.19
RAD23B-201ENST00000358015 CNGB1Q14028 1251 aaPredicted RBP22.47■■□□□ 1.19
RAD23B-201ENST00000358015 POLR3GLQ9BT43 218 aa22.45■■□□□ 1.18
RAD23B-201ENST00000358015 CEP164Q9UPV0 1460 aa22.44■■□□□ 1.18
RAD23B-201ENST00000358015 DDX10Q13206 875 aaKnown RBP22.44■■□□□ 1.18
RAD23B-201ENST00000358015 FKBP8Q14318 412 aa22.39■■□□□ 1.17
RAD23B-201ENST00000358015 TRIM52Q96A61 297 aa22.36■■□□□ 1.17
RAD23B-201ENST00000358015 HIRIP3Q9BW71 556 aaPredicted RBP22.25■■□□□ 1.15
RAD23B-201ENST00000358015 VPS8Q8N3P4 1428 aa22.24■■□□□ 1.15
RAD23B-201ENST00000358015 RUSC2Q8N2Y8 1516 aa22.22■■□□□ 1.15
RAD23B-201ENST00000358015 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
RAD23B-201ENST00000358015 CDK11AQ9UQ88 783 aaPredicted RBP22.21■■□□□ 1.15
RAD23B-201ENST00000358015 BAZ1BQ9UIG0 1483 aaKnown RBP22.19■■□□□ 1.14
RAD23B-201ENST00000358015 TONSLQ96HA7 1378 aa22.18■■□□□ 1.14
RAD23B-201ENST00000358015 SUPT16HQ9Y5B9 1047 aaKnown RBP22.16■■□□□ 1.14
RAD23B-201ENST00000358015 KANK4Q5T7N3 995 aaPredicted RBP22.12■■□□□ 1.13
RAD23B-201ENST00000358015 HNRNPUQ00839 825 aaKnown RBP eCLIP22.12■■□□□ 1.13
RAD23B-201ENST00000358015 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
RAD23B-201ENST00000358015 ARID3CA6NKF2 412 aa22.06■■□□□ 1.12
RAD23B-201ENST00000358015 SIN3AQ96ST3 1273 aa22.06■■□□□ 1.12
RAD23B-201ENST00000358015 CCNB3Q8WWL7 1395 aa22.05■■□□□ 1.12
RAD23B-201ENST00000358015 ZNF326Q5BKZ1 582 aaKnown RBP22.04■■□□□ 1.12
RAD23B-201ENST00000358015 SMARCA4P51532 1647 aa21.99■■□□□ 1.11
RAD23B-201ENST00000358015 RAPGEF2Q9Y4G8 1499 aa21.98■■□□□ 1.11
RAD23B-201ENST00000358015 CHIC2Q9UKJ5 165 aa21.96■■□□□ 1.11
RAD23B-201ENST00000358015 IRX6P78412 446 aaPredicted RBP21.95■■□□□ 1.1
RAD23B-201ENST00000358015 FAM9BQ8IZU0 186 aa21.94■■□□□ 1.1
RAD23B-201ENST00000358015 SMARCA2P51531 1590 aa21.94■■□□□ 1.1
RAD23B-201ENST00000358015 MTUS2Q5JR59 1369 aa21.92■■□□□ 1.1
RAD23B-201ENST00000358015 RTL5Q5HYW3 569 aaPredicted RBP21.91■■□□□ 1.1
RAD23B-201ENST00000358015 ANP32EQ9BTT0 268 aa21.9■■□□□ 1.1
RAD23B-201ENST00000358015 DHX57Q6P158 1386 aaKnown RBP21.89■■□□□ 1.1
RAD23B-201ENST00000358015 DAXXQ9UER7 740 aaPredicted RBP21.84■■□□□ 1.09
RAD23B-201ENST00000358015 RAB3GAP2Q9H2M9 1393 aa21.83■■□□□ 1.08
RAD23B-201ENST00000358015 RRP7BPQ9NSQ0 103 aa21.82■■□□□ 1.08
RAD23B-201ENST00000358015 MRS2Q9HD23 443 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms