RNA–Protein interactions for RNA: ENST00000357877.6

SEMA4F-202, Transcript of ssemaphorin 4F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4F, Length 4,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4F-202ENST00000357877 NISCHQ9Y2I1 1504 aa25.56■■□□□ 1.68
SEMA4F-202ENST00000357877 DCAF8L2P0C7V8 631 aa25.41■■□□□ 1.66
SEMA4F-202ENST00000357877 SUPT5HO00267 1087 aaKnown RBP24.49■■□□□ 1.51
SEMA4F-202ENST00000357877 SHROOM4Q9ULL8 1493 aa24.24■■□□□ 1.47
SEMA4F-202ENST00000357877 EHMT2Q96KQ7 1210 aa23.39■■□□□ 1.33
SEMA4F-202ENST00000357877 FAM9AQ8IZU1 332 aaPredicted RBP23■■□□□ 1.27
SEMA4F-202ENST00000357877 PCGF6Q9BYE7 350 aa22.87■■□□□ 1.25
SEMA4F-202ENST00000357877 TRIM41Q8WV44 630 aa22.64■■□□□ 1.21
SEMA4F-202ENST00000357877 APLP2Q06481 763 aa22.6■■□□□ 1.21
SEMA4F-202ENST00000357877 TTBK1Q5TCY1 1321 aaPredicted RBP22.58■■□□□ 1.2
SEMA4F-202ENST00000357877 RANGAP1P46060 587 aaPredicted RBP22.31■■□□□ 1.16
SEMA4F-202ENST00000357877 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
SEMA4F-202ENST00000357877 UBTFP17480 764 aaKnown RBP22.19■■□□□ 1.14
SEMA4F-202ENST00000357877 ZEB1P37275 1124 aaPredicted RBP22.16■■□□□ 1.14
SEMA4F-202ENST00000357877 CCER1Q8TC90 406 aaPredicted RBP22.16■■□□□ 1.14
SEMA4F-202ENST00000357877 LOC105371045A0A1W2PR82 267 aa22.1■■□□□ 1.13
SEMA4F-202ENST00000357877 PPARGC1BQ86YN6 1023 aaKnown RBP22.07■■□□□ 1.12
SEMA4F-202ENST00000357877 TRIM26Q12899 539 aaPredicted RBP21.95■■□□□ 1.1
SEMA4F-202ENST00000357877 PELP1Q8IZL8 1130 aaKnown RBP21.94■■□□□ 1.1
SEMA4F-202ENST00000357877 ATP1B4Q9UN42 357 aaPredicted RBP21.91■■□□□ 1.1
SEMA4F-202ENST00000357877 HRCP23327 699 aa21.88■■□□□ 1.09
SEMA4F-202ENST00000357877 CENPBP07199 599 aaPredicted RBP21.81■■□□□ 1.08
SEMA4F-202ENST00000357877 ABCC9O60706 1549 aa21.61■■□□□ 1.05
SEMA4F-202ENST00000357877 YTHDC1Q96MU7 727 aaKnown RBP21.54■■□□□ 1.04
SEMA4F-202ENST00000357877 HNRNPUL2Q1KMD3 747 aaKnown RBP21.46■■□□□ 1.03
SEMA4F-202ENST00000357877 PABPN1Q86U42 306 aaKnown RBP eCLIP21.45■■□□□ 1.02
SEMA4F-202ENST00000357877 ITGAEP38570 1179 aa21.43■■□□□ 1.02
SEMA4F-202ENST00000357877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.36■■□□□ 1.01
SEMA4F-202ENST00000357877 ZCCHC6Q5VYS8 1495 aaKnown RBP21.23■□□□□ 0.99
SEMA4F-202ENST00000357877 NEFLP07196 543 aa21.15■□□□□ 0.98
SEMA4F-202ENST00000357877 DIEXFQ68CQ4 756 aaKnown RBP21.05■□□□□ 0.96
SEMA4F-202ENST00000357877 ERICH6Q7L0X2 663 aa21.02■□□□□ 0.96
SEMA4F-202ENST00000357877 CSRNP3Q8WYN3 585 aa20.95■□□□□ 0.94
SEMA4F-202ENST00000357877 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
SEMA4F-202ENST00000357877 FAM50AQ14320 339 aaKnown RBP20.9■□□□□ 0.94
SEMA4F-202ENST00000357877 POLR3GLQ9BT43 218 aa20.9■□□□□ 0.94
SEMA4F-202ENST00000357877 CCDC180Q9P1Z9 1646 aa20.83■□□□□ 0.92
SEMA4F-202ENST00000357877 CNGB1Q14028 1251 aaPredicted RBP20.8■□□□□ 0.92
SEMA4F-202ENST00000357877 MYT1LQ9UL68 1186 aa20.75■□□□□ 0.91
SEMA4F-202ENST00000357877 NEUROD1Q13562 356 aa20.74■□□□□ 0.91
SEMA4F-202ENST00000357877 DCAF1Q9Y4B6 1507 aa20.68■□□□□ 0.9
SEMA4F-202ENST00000357877 P3H3Q8IVL6 736 aa20.66■□□□□ 0.9
SEMA4F-202ENST00000357877 TRIM52Q96A61 297 aa20.65■□□□□ 0.9
SEMA4F-202ENST00000357877 ZNF316A6NFI3 1004 aaPredicted RBP20.65■□□□□ 0.9
SEMA4F-202ENST00000357877 MYO15BQ96JP2 1530 aa20.61■□□□□ 0.89
SEMA4F-202ENST00000357877 GTF3C3Q9Y5Q9 886 aa20.58■□□□□ 0.89
SEMA4F-202ENST00000357877 RSF1Q96T23 1441 aaPredicted RBP20.56■□□□□ 0.88
SEMA4F-202ENST00000357877 MYT1Q01538 1121 aa20.49■□□□□ 0.87
SEMA4F-202ENST00000357877 FBLN2P98095 1184 aa20.47■□□□□ 0.87
SEMA4F-202ENST00000357877 ARID3CA6NKF2 412 aa20.45■□□□□ 0.86
SEMA4F-202ENST00000357877 ACIN1Q9UKV3 1341 aaKnown RBP20.4■□□□□ 0.86
SEMA4F-202ENST00000357877 ANP32CO43423 234 aa20.39■□□□□ 0.85
SEMA4F-202ENST00000357877 ZNF326Q5BKZ1 582 aaKnown RBP20.39■□□□□ 0.85
SEMA4F-202ENST00000357877 BCANQ96GW7 911 aa20.36■□□□□ 0.85
SEMA4F-202ENST00000357877 SLC4A1APQ9BWU0 796 aaKnown RBP20.29■□□□□ 0.84
SEMA4F-202ENST00000357877 RB1CC1Q8TDY2 1594 aa20.24■□□□□ 0.83
SEMA4F-202ENST00000357877 DAXXQ9UER7 740 aaPredicted RBP20.24■□□□□ 0.83
SEMA4F-202ENST00000357877 CLIP1P30622 1438 aa20.21■□□□□ 0.83
SEMA4F-202ENST00000357877 ZNF777Q9ULD5 760 aaPredicted RBP20.2■□□□□ 0.82
SEMA4F-202ENST00000357877 NACADO15069 1562 aa20.19■□□□□ 0.82
SEMA4F-202ENST00000357877 CECR2Q9BXF3 1484 aa20.17■□□□□ 0.82
SEMA4F-202ENST00000357877 CEP162Q5TB80 1403 aa20.15■□□□□ 0.82
SEMA4F-202ENST00000357877 CDK11AQ9UQ88 783 aaPredicted RBP20.14■□□□□ 0.81
SEMA4F-202ENST00000357877 EEA1Q15075 1411 aa20.11■□□□□ 0.81
SEMA4F-202ENST00000357877 DDX10Q13206 875 aaKnown RBP20.11■□□□□ 0.81
SEMA4F-202ENST00000357877 WRNQ14191 1432 aaPredicted RBP eCLIP20.11■□□□□ 0.81
SEMA4F-202ENST00000357877 TONSLQ96HA7 1378 aa20.09■□□□□ 0.81
SEMA4F-202ENST00000357877 CHIC2Q9UKJ5 165 aa20.06■□□□□ 0.8
SEMA4F-202ENST00000357877 GOLGA3Q08378 1498 aa20.06■□□□□ 0.8
SEMA4F-202ENST00000357877 CLSPNQ9HAW4 1339 aa20.03■□□□□ 0.8
SEMA4F-202ENST00000357877 TNIKQ9UKE5 1360 aa20.02■□□□□ 0.8
SEMA4F-202ENST00000357877 MIER1Q8N108 512 aa20.01■□□□□ 0.79
SEMA4F-202ENST00000357877 BAZ1AQ9NRL2 1556 aaPredicted RBP19.97■□□□□ 0.79
SEMA4F-202ENST00000357877 BAZ1BQ9UIG0 1483 aaKnown RBP19.97■□□□□ 0.79
SEMA4F-202ENST00000357877 MTUS2Q5JR59 1369 aa19.97■□□□□ 0.79
SEMA4F-202ENST00000357877 HIRIP3Q9BW71 556 aaPredicted RBP19.92■□□□□ 0.78
SEMA4F-202ENST00000357877 SCAF1Q9H7N4 1312 aaKnown RBP19.92■□□□□ 0.78
SEMA4F-202ENST00000357877 FKBP8Q14318 412 aa19.91■□□□□ 0.78
SEMA4F-202ENST00000357877 RTL5Q5HYW3 569 aaPredicted RBP19.91■□□□□ 0.78
SEMA4F-202ENST00000357877 HNRNPUQ00839 825 aaKnown RBP eCLIP19.9■□□□□ 0.78
SEMA4F-202ENST00000357877 CEP164Q9UPV0 1460 aa19.88■□□□□ 0.77
SEMA4F-202ENST00000357877 MROH2BQ7Z745 1585 aa19.88■□□□□ 0.77
SEMA4F-202ENST00000357877 SOGA1O94964 1423 aa19.88■□□□□ 0.77
SEMA4F-202ENST00000357877 KIF27Q86VH2 1401 aa19.85■□□□□ 0.77
SEMA4F-202ENST00000357877 FAM9BQ8IZU0 186 aa19.84■□□□□ 0.77
SEMA4F-202ENST00000357877 RRP7BPQ9NSQ0 103 aa19.83■□□□□ 0.76
SEMA4F-202ENST00000357877 CHMP7Q8WUX9 453 aaPredicted RBP19.78■□□□□ 0.76
SEMA4F-202ENST00000357877 TSPY4P0CV99 314 aa19.77■□□□□ 0.76
SEMA4F-202ENST00000357877 TSPY10P0CW01 314 aa19.77■□□□□ 0.76
SEMA4F-202ENST00000357877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.75■□□□□ 0.75
SEMA4F-202ENST00000357877 CCDC88BA6NC98 1476 aa19.74■□□□□ 0.75
SEMA4F-202ENST00000357877 KDM2AQ9Y2K7 1162 aa19.72■□□□□ 0.75
SEMA4F-202ENST00000357877 SALL2Q9Y467 1007 aaPredicted RBP19.7■□□□□ 0.74
SEMA4F-202ENST00000357877 ABCC8Q09428 1581 aa19.69■□□□□ 0.74
SEMA4F-202ENST00000357877 CHGAP10645 457 aaKnown RBP19.69■□□□□ 0.74
SEMA4F-202ENST00000357877 MRS2Q9HD23 443 aa19.69■□□□□ 0.74
SEMA4F-202ENST00000357877 CANXP27824 592 aaKnown RBP19.68■□□□□ 0.74
SEMA4F-202ENST00000357877 EIF4G2P78344 907 aaKnown RBP eCLIP19.67■□□□□ 0.74
SEMA4F-202ENST00000357877 TMC1Q8TDI8 760 aa19.67■□□□□ 0.74
SEMA4F-202ENST00000357877 SIN3AQ96ST3 1273 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms