RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 DCAF8L2P0C7V8 631 aa10.25□□□□□ -0.77
BRCA1-203ENST00000357654 EHMT2Q96KQ7 1210 aa9.64□□□□□ -0.87
BRCA1-203ENST00000357654 PELP1Q8IZL8 1130 aaKnown RBP9.31□□□□□ -0.92
BRCA1-203ENST00000357654 FAM9AQ8IZU1 332 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-203ENST00000357654 TTBK1Q5TCY1 1321 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-203ENST00000357654 ERICH6Q7L0X2 663 aa9.2□□□□□ -0.94
BRCA1-203ENST00000357654 SUPT5HO00267 1087 aaKnown RBP9.19□□□□□ -0.94
BRCA1-203ENST00000357654 RANGAP1P46060 587 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-203ENST00000357654 ATP1B4Q9UN42 357 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-203ENST00000357654 APLP2Q06481 763 aa9.16□□□□□ -0.94
BRCA1-203ENST00000357654 CHIC1Q5VXU3 224 aa9.14□□□□□ -0.95
BRCA1-203ENST00000357654 MYT1LQ9UL68 1186 aa9.1□□□□□ -0.95
BRCA1-203ENST00000357654 MYT1Q01538 1121 aa9.09□□□□□ -0.95
BRCA1-203ENST00000357654 SHROOM4Q9ULL8 1493 aa8.92□□□□□ -0.98
BRCA1-203ENST00000357654 CCER1Q8TC90 406 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-203ENST00000357654 SLC4A1APQ9BWU0 796 aaKnown RBP8.9□□□□□ -0.98
BRCA1-203ENST00000357654 POLR3GLQ9BT43 218 aa8.87□□□□□ -0.99
BRCA1-203ENST00000357654 CNGB1Q14028 1251 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-203ENST00000357654 NISCHQ9Y2I1 1504 aa8.8□□□□□ -1
BRCA1-203ENST00000357654 DAXXQ9UER7 740 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-203ENST00000357654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-203ENST00000357654 HNRNPUL2Q1KMD3 747 aaKnown RBP8.77□□□□□ -1.01
BRCA1-203ENST00000357654 PCGF6Q9BYE7 350 aa8.76□□□□□ -1.01
BRCA1-203ENST00000357654 SLC24A1O60721 1099 aa8.76□□□□□ -1.01
BRCA1-203ENST00000357654 YTHDC1Q96MU7 727 aaKnown RBP8.72□□□□□ -1.01
BRCA1-203ENST00000357654 BCL11AQ9H165 835 aa8.72□□□□□ -1.01
BRCA1-203ENST00000357654 NEFLP07196 543 aa8.69□□□□□ -1.02
BRCA1-203ENST00000357654 PLPPR3Q6T4P5 718 aa8.65□□□□□ -1.02
BRCA1-203ENST00000357654 BCANQ96GW7 911 aa8.59□□□□□ -1.03
BRCA1-203ENST00000357654 CLSPNQ9HAW4 1339 aa8.58□□□□□ -1.04
BRCA1-203ENST00000357654 ITGAEP38570 1179 aa8.56□□□□□ -1.04
BRCA1-203ENST00000357654 UBTFP17480 764 aaKnown RBP8.55□□□□□ -1.04
BRCA1-203ENST00000357654 CENPBP07199 599 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-203ENST00000357654 ZNF316A6NFI3 1004 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-203ENST00000357654 PPARGC1BQ86YN6 1023 aaKnown RBP8.5□□□□□ -1.05
BRCA1-203ENST00000357654 A0A0G2JS52 829 aa8.49□□□□□ -1.05
BRCA1-203ENST00000357654 ZBTB47Q9UFB7 747 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-203ENST00000357654 SCAF1Q9H7N4 1312 aaKnown RBP8.41□□□□□ -1.06
BRCA1-203ENST00000357654 NCBP3Q53F19 620 aaKnown RBP8.39□□□□□ -1.07
BRCA1-203ENST00000357654 TULP1O00294 542 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-203ENST00000357654 PLEKHG5O94827 1062 aa8.38□□□□□ -1.07
BRCA1-203ENST00000357654 TRIM41Q8WV44 630 aa8.33□□□□□ -1.08
BRCA1-203ENST00000357654 ZNF326Q5BKZ1 582 aaKnown RBP8.29□□□□□ -1.08
BRCA1-203ENST00000357654 RTL5Q5HYW3 569 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-203ENST00000357654 SENP3Q9H4L4 574 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-203ENST00000357654 FBLN2P98095 1184 aa8.29□□□□□ -1.08
BRCA1-203ENST00000357654 CANXP27824 592 aaKnown RBP8.28□□□□□ -1.08
BRCA1-203ENST00000357654 ESF1Q9H501 851 aaKnown RBP8.26□□□□□ -1.09
BRCA1-203ENST00000357654 ZBTB7CA1YPR0 619 aa8.26□□□□□ -1.09
BRCA1-203ENST00000357654 CDK11BP21127 795 aaKnown RBP8.24□□□□□ -1.09
BRCA1-203ENST00000357654 CDK11AQ9UQ88 783 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-203ENST00000357654 TRIM52Q96A61 297 aa8.24□□□□□ -1.09
BRCA1-203ENST00000357654 NEFMP07197 916 aa8.22□□□□□ -1.09
BRCA1-203ENST00000357654 STAG3Q9UJ98 1225 aa8.19□□□□□ -1.1
BRCA1-203ENST00000357654 ARID3CA6NKF2 412 aa8.16□□□□□ -1.1
BRCA1-203ENST00000357654 FAM50AQ14320 339 aaKnown RBP8.16□□□□□ -1.1
BRCA1-203ENST00000357654 ARXQ96QS3 562 aa8.15□□□□□ -1.1
BRCA1-203ENST00000357654 CHGAP10645 457 aaKnown RBP8.15□□□□□ -1.11
BRCA1-203ENST00000357654 ZEB1P37275 1124 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-203ENST00000357654 NEUROD1Q13562 356 aa8.12□□□□□ -1.11
BRCA1-203ENST00000357654 HAP1P54257 671 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-203ENST00000357654 C14orf37Q86TY3 774 aa8.11□□□□□ -1.11
BRCA1-203ENST00000357654 NPM2Q86SE8 214 aaKnown RBP8.1□□□□□ -1.11
BRCA1-203ENST00000357654 TAOK2Q9UL54 1235 aa8.1□□□□□ -1.11
BRCA1-203ENST00000357654 NPHP1O15259 732 aa8.09□□□□□ -1.11
BRCA1-203ENST00000357654 CLSTN1O94985 981 aa8.07□□□□□ -1.12
BRCA1-203ENST00000357654 HSP90AA1P07900 732 aaKnown RBP8.07□□□□□ -1.12
BRCA1-203ENST00000357654 PRM3Q9NNZ6 103 aa8.06□□□□□ -1.12
BRCA1-203ENST00000357654 KRI1Q8N9T8 703 aaKnown RBP8.03□□□□□ -1.12
BRCA1-203ENST00000357654 ZNF777Q9ULD5 760 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-203ENST00000357654 TPRNQ4KMQ1 711 aa8.02□□□□□ -1.13
BRCA1-203ENST00000357654 ANP32BQ92688 251 aaKnown RBP8□□□□□ -1.13
BRCA1-203ENST00000357654 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-203ENST00000357654 EIF5BO60841 1220 aaKnown RBP7.98□□□□□ -1.13
BRCA1-203ENST00000357654 AMER1Q5JTC6 1135 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-203ENST00000357654 ISY1Q9ULR0 285 aaKnown RBP7.94□□□□□ -1.14
BRCA1-203ENST00000357654 SALL2Q9Y467 1007 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-203ENST00000357654 DIEXFQ68CQ4 756 aaKnown RBP7.93□□□□□ -1.14
BRCA1-203ENST00000357654 LMOD2Q6P5Q4 547 aa7.93□□□□□ -1.14
BRCA1-203ENST00000357654 NPM1P06748 294 aaKnown RBP eCLIP7.93□□□□□ -1.14
BRCA1-203ENST00000357654 ARID4BQ4LE39 1312 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-203ENST00000357654 ANO8Q9HCE9 1232 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-203ENST00000357654 FBXO3Q9UK99 471 aa7.9□□□□□ -1.14
BRCA1-203ENST00000357654 TRIM26Q12899 539 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-203ENST00000357654 P3H3Q8IVL6 736 aa7.9□□□□□ -1.15
BRCA1-203ENST00000357654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.88□□□□□ -1.151e-6■■■□□ 18.6
BRCA1-203ENST00000357654 CCDC180Q9P1Z9 1646 aa7.87□□□□□ -1.15
BRCA1-203ENST00000357654 PDE4CQ08493 712 aa7.87□□□□□ -1.15
BRCA1-203ENST00000357654 ANP32CO43423 234 aa7.87□□□□□ -1.15
BRCA1-203ENST00000357654 TRHP20396 242 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-203ENST00000357654 PPP1R15AO75807 674 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-203ENST00000357654 PABPN1Q86U42 306 aaKnown RBP eCLIP7.84□□□□□ -1.15
BRCA1-203ENST00000357654 GOLGA2Q08379 1002 aa7.83□□□□□ -1.16
BRCA1-203ENST00000357654 UPF2Q9HAU5 1272 aaKnown RBP7.82□□□□□ -1.16
BRCA1-203ENST00000357654 ANP32AP39687 249 aaKnown RBP7.82□□□□□ -1.16
BRCA1-203ENST00000357654 NBR1Q14596 966 aa7.81□□□□□ -1.16
BRCA1-203ENST00000357654 NAP1L2Q9ULW6 460 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-203ENST00000357654 ZRSR1Q15695 479 aaKnown RBP7.8□□□□□ -1.16
BRCA1-203ENST00000357654 MYH16Q9H6N6 1097 aa7.79□□□□□ -1.16
BRCA1-203ENST00000357654 AEBP2Q6ZN18 517 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms