RNA–Protein interactions for RNA: ENST00000356940.10

RAB18-201, Transcript of RAB18, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB18, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB18-201ENST00000356940 NISCHQ9Y2I1 1504 aa19.47■□□□□ 0.71
RAB18-201ENST00000356940 DCAF8L2P0C7V8 631 aa18.34■□□□□ 0.53
RAB18-201ENST00000356940 SUPT5HO00267 1087 aaKnown RBP18.22■□□□□ 0.51
RAB18-201ENST00000356940 SHROOM4Q9ULL8 1493 aa18.1■□□□□ 0.49
RAB18-201ENST00000356940 PCGF6Q9BYE7 350 aa17.4■□□□□ 0.38
RAB18-201ENST00000356940 EHMT2Q96KQ7 1210 aa17.22■□□□□ 0.35
RAB18-201ENST00000356940 FAM9AQ8IZU1 332 aaPredicted RBP17.03■□□□□ 0.32
RAB18-201ENST00000356940 HRCP23327 699 aa17.03■□□□□ 0.32
RAB18-201ENST00000356940 CHIC1Q5VXU3 224 aa16.96■□□□□ 0.31
RAB18-201ENST00000356940 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
RAB18-201ENST00000356940 ZEB1P37275 1124 aaPredicted RBP16.85■□□□□ 0.29
RAB18-201ENST00000356940 LOC105371045A0A1W2PR82 267 aa16.77■□□□□ 0.27
RAB18-201ENST00000356940 TRIM26Q12899 539 aaPredicted RBP16.75■□□□□ 0.27
RAB18-201ENST00000356940 PPARGC1BQ86YN6 1023 aaKnown RBP16.72■□□□□ 0.27
RAB18-201ENST00000356940 TTBK1Q5TCY1 1321 aaPredicted RBP16.7■□□□□ 0.26
RAB18-201ENST00000356940 CCER1Q8TC90 406 aaPredicted RBP16.63■□□□□ 0.25
RAB18-201ENST00000356940 PELP1Q8IZL8 1130 aaKnown RBP16.56■□□□□ 0.24
RAB18-201ENST00000356940 CENPBP07199 599 aaPredicted RBP16.53■□□□□ 0.24
RAB18-201ENST00000356940 APLP2Q06481 763 aa16.53■□□□□ 0.24
RAB18-201ENST00000356940 UBTFP17480 764 aaKnown RBP16.36■□□□□ 0.21
RAB18-201ENST00000356940 ZCCHC6Q5VYS8 1495 aaKnown RBP16.32■□□□□ 0.2
RAB18-201ENST00000356940 RANGAP1P46060 587 aaPredicted RBP16.3■□□□□ 0.2
RAB18-201ENST00000356940 YTHDC1Q96MU7 727 aaKnown RBP16.25■□□□□ 0.19
RAB18-201ENST00000356940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.19■□□□□ 0.18
RAB18-201ENST00000356940 MYO15BQ96JP2 1530 aa16.19■□□□□ 0.18
RAB18-201ENST00000356940 DCAF1Q9Y4B6 1507 aa16.15■□□□□ 0.18
RAB18-201ENST00000356940 DIEXFQ68CQ4 756 aaKnown RBP16.07■□□□□ 0.16
RAB18-201ENST00000356940 MYT1Q01538 1121 aa16.03■□□□□ 0.16
RAB18-201ENST00000356940 HNRNPUL2Q1KMD3 747 aaKnown RBP16.01■□□□□ 0.15
RAB18-201ENST00000356940 CCDC180Q9P1Z9 1646 aa15.97■□□□□ 0.15
RAB18-201ENST00000356940 GTF3C3Q9Y5Q9 886 aa15.89■□□□□ 0.13
RAB18-201ENST00000356940 ATP1B4Q9UN42 357 aaPredicted RBP15.88■□□□□ 0.13
RAB18-201ENST00000356940 ABCC9O60706 1549 aa15.85■□□□□ 0.13
RAB18-201ENST00000356940 ACIN1Q9UKV3 1341 aaKnown RBP15.84■□□□□ 0.13
RAB18-201ENST00000356940 ITGAEP38570 1179 aa15.8■□□□□ 0.12
RAB18-201ENST00000356940 NEFLP07196 543 aa15.78■□□□□ 0.12
RAB18-201ENST00000356940 SCRIBQ14160 1630 aa15.78■□□□□ 0.12
RAB18-201ENST00000356940 ZNF316A6NFI3 1004 aaPredicted RBP15.75■□□□□ 0.11
RAB18-201ENST00000356940 SCAF1Q9H7N4 1312 aaKnown RBP15.72■□□□□ 0.11
RAB18-201ENST00000356940 ERICH6Q7L0X2 663 aa15.7■□□□□ 0.1
RAB18-201ENST00000356940 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
RAB18-201ENST00000356940 RSF1Q96T23 1441 aaPredicted RBP15.67■□□□□ 0.1
RAB18-201ENST00000356940 NEUROD1Q13562 356 aa15.64■□□□□ 0.09
RAB18-201ENST00000356940 PABPN1Q86U42 306 aaKnown RBP eCLIP15.62■□□□□ 0.09
RAB18-201ENST00000356940 FAM50AQ14320 339 aaKnown RBP15.43■□□□□ 0.06
RAB18-201ENST00000356940 BCANQ96GW7 911 aa15.41■□□□□ 0.06
RAB18-201ENST00000356940 RB1CC1Q8TDY2 1594 aa15.4■□□□□ 0.06
RAB18-201ENST00000356940 CEP162Q5TB80 1403 aa15.38■□□□□ 0.05
RAB18-201ENST00000356940 MIER1Q8N108 512 aa15.37■□□□□ 0.05
RAB18-201ENST00000356940 CECR2Q9BXF3 1484 aa15.31■□□□□ 0.04
RAB18-201ENST00000356940 ANP32CO43423 234 aa15.28■□□□□ 0.04
RAB18-201ENST00000356940 POLR3GLQ9BT43 218 aa15.28■□□□□ 0.04
RAB18-201ENST00000356940 CLIP1P30622 1438 aa15.27■□□□□ 0.03
RAB18-201ENST00000356940 EEA1Q15075 1411 aa15.26■□□□□ 0.03
RAB18-201ENST00000356940 TNIKQ9UKE5 1360 aa15.26■□□□□ 0.03
RAB18-201ENST00000356940 CNGB1Q14028 1251 aaPredicted RBP15.26■□□□□ 0.03
RAB18-201ENST00000356940 CLSPNQ9HAW4 1339 aa15.25■□□□□ 0.03
RAB18-201ENST00000356940 GOLGA3Q08378 1498 aa15.23■□□□□ 0.03
RAB18-201ENST00000356940 NACADO15069 1562 aa15.2■□□□□ 0.02
RAB18-201ENST00000356940 P3H3Q8IVL6 736 aa15.19■□□□□ 0.02
RAB18-201ENST00000356940 TRIM52Q96A61 297 aa15.17■□□□□ 0.02
RAB18-201ENST00000356940 MROH2BQ7Z745 1585 aa15.17■□□□□ 0.02
RAB18-201ENST00000356940 FKBP8Q14318 412 aa15.15■□□□□ 0.02
RAB18-201ENST00000356940 DDX10Q13206 875 aaKnown RBP15.15■□□□□ 0.02
RAB18-201ENST00000356940 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
RAB18-201ENST00000356940 SOGA1O94964 1423 aa15.14■□□□□ 0.01
RAB18-201ENST00000356940 BAZ1AQ9NRL2 1556 aaPredicted RBP15.13■□□□□ 0.01
RAB18-201ENST00000356940 CDK11AQ9UQ88 783 aaPredicted RBP15.1■□□□□ 0.01
RAB18-201ENST00000356940 CEP164Q9UPV0 1460 aa15.09■□□□□ 0.01
RAB18-201ENST00000356940 CCDC88BA6NC98 1476 aa15.06■□□□□ 0
RAB18-201ENST00000356940 ABCC8Q09428 1581 aa15.05■□□□□ -0
RAB18-201ENST00000356940 TONSLQ96HA7 1378 aa15.02■□□□□ -0
RAB18-201ENST00000356940 WIZO95785 1651 aa14.99□□□□□ -0.01
RAB18-201ENST00000356940 HIRIP3Q9BW71 556 aaPredicted RBP14.98□□□□□ -0.01
RAB18-201ENST00000356940 HNRNPUQ00839 825 aaKnown RBP eCLIP14.98□□□□□ -0.01
RAB18-201ENST00000356940 RTL5Q5HYW3 569 aaPredicted RBP14.97□□□□□ -0.01
RAB18-201ENST00000356940 DAXXQ9UER7 740 aaPredicted RBP14.97□□□□□ -0.01
RAB18-201ENST00000356940 ZNF326Q5BKZ1 582 aaKnown RBP14.96□□□□□ -0.01
RAB18-201ENST00000356940 VPS8Q8N3P4 1428 aa14.93□□□□□ -0.02
RAB18-201ENST00000356940 SUPT16HQ9Y5B9 1047 aaKnown RBP14.93□□□□□ -0.02
RAB18-201ENST00000356940 ARID3CA6NKF2 412 aa14.91□□□□□ -0.02
RAB18-201ENST00000356940 BAZ1BQ9UIG0 1483 aaKnown RBP14.9□□□□□ -0.02
RAB18-201ENST00000356940 KIF27Q86VH2 1401 aa14.85□□□□□ -0.03
RAB18-201ENST00000356940 FAM9BQ8IZU0 186 aa14.85□□□□□ -0.03
RAB18-201ENST00000356940 TOP2AP11388 1531 aaKnown RBP14.85□□□□□ -0.03
RAB18-201ENST00000356940 CCNB3Q8WWL7 1395 aa14.84□□□□□ -0.03
RAB18-201ENST00000356940 SIN3AQ96ST3 1273 aa14.83□□□□□ -0.04
RAB18-201ENST00000356940 CHIC2Q9UKJ5 165 aa14.83□□□□□ -0.04
RAB18-201ENST00000356940 IRX6P78412 446 aaPredicted RBP14.82□□□□□ -0.04
RAB18-201ENST00000356940 KANK4Q5T7N3 995 aaPredicted RBP14.82□□□□□ -0.04
RAB18-201ENST00000356940 RUSC2Q8N2Y8 1516 aa14.81□□□□□ -0.04
RAB18-201ENST00000356940 ANP32EQ9BTT0 268 aa14.81□□□□□ -0.04
RAB18-201ENST00000356940 MTUS2Q5JR59 1369 aa14.81□□□□□ -0.04
RAB18-201ENST00000356940 ANP32AP39687 249 aaKnown RBP14.77□□□□□ -0.04
RAB18-201ENST00000356940 MRS2Q9HD23 443 aa14.76□□□□□ -0.05
RAB18-201ENST00000356940 MYT1LQ9UL68 1186 aa14.76□□□□□ -0.05
RAB18-201ENST00000356940 ZNF777Q9ULD5 760 aaPredicted RBP14.73□□□□□ -0.05
RAB18-201ENST00000356940 EIF4G2P78344 907 aaKnown RBP eCLIP14.72□□□□□ -0.05
RAB18-201ENST00000356940 RRP7BPQ9NSQ0 103 aa14.72□□□□□ -0.05
RAB18-201ENST00000356940 RAPGEF2Q9Y4G8 1499 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms