RNA–Protein interactions for RNA: ENST00000356878.5

PCDHA7-201, Transcript of protocadherin alpha 7, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA7, Length 2,922 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7-201ENST00000356878 NISCHQ9Y2I1 1504 aa31.54■■■□□ 2.64
PCDHA7-201ENST00000356878 SHROOM4Q9ULL8 1493 aa27.03■■□□□ 1.92
PCDHA7-201ENST00000356878 CCDC180Q9P1Z9 1646 aa26.73■■□□□ 1.87
PCDHA7-201ENST00000356878 ZCCHC6Q5VYS8 1495 aaKnown RBP26.63■■□□□ 1.85
PCDHA7-201ENST00000356878 DCAF8L2P0C7V8 631 aa26.45■■□□□ 1.83
PCDHA7-201ENST00000356878 SUPT5HO00267 1087 aaKnown RBP26.42■■□□□ 1.82
PCDHA7-201ENST00000356878 DCAF1Q9Y4B6 1507 aa25.74■■□□□ 1.71
PCDHA7-201ENST00000356878 CHIC1Q5VXU3 224 aa25.53■■□□□ 1.68
PCDHA7-201ENST00000356878 MYO15BQ96JP2 1530 aa25.44■■□□□ 1.66
PCDHA7-201ENST00000356878 SCRIBQ14160 1630 aa25.25■■□□□ 1.63
PCDHA7-201ENST00000356878 ABCC9O60706 1549 aa25.18■■□□□ 1.62
PCDHA7-201ENST00000356878 RSF1Q96T23 1441 aaPredicted RBP24.96■■□□□ 1.59
PCDHA7-201ENST00000356878 LOC105371045A0A1W2PR82 267 aa24.89■■□□□ 1.58
PCDHA7-201ENST00000356878 NACADO15069 1562 aa24.8■■□□□ 1.56
PCDHA7-201ENST00000356878 CECR2Q9BXF3 1484 aa24.75■■□□□ 1.55
PCDHA7-201ENST00000356878 RB1CC1Q8TDY2 1594 aa24.69■■□□□ 1.54
PCDHA7-201ENST00000356878 PCGF6Q9BYE7 350 aa24.63■■□□□ 1.53
PCDHA7-201ENST00000356878 MROH2BQ7Z745 1585 aa24.6■■□□□ 1.53
PCDHA7-201ENST00000356878 TRIM41Q8WV44 630 aa24.51■■□□□ 1.51
PCDHA7-201ENST00000356878 FAM9AQ8IZU1 332 aaPredicted RBP24.46■■□□□ 1.51
PCDHA7-201ENST00000356878 WIZO95785 1651 aa24.45■■□□□ 1.5
PCDHA7-201ENST00000356878 HRCP23327 699 aa24.41■■□□□ 1.5
PCDHA7-201ENST00000356878 EHMT2Q96KQ7 1210 aa24.37■■□□□ 1.49
PCDHA7-201ENST00000356878 PPARGC1BQ86YN6 1023 aaKnown RBP24.2■■□□□ 1.46
PCDHA7-201ENST00000356878 BAZ1AQ9NRL2 1556 aaPredicted RBP24.18■■□□□ 1.46
PCDHA7-201ENST00000356878 UNC13AQ9UPW8 1703 aa24.16■■□□□ 1.46
PCDHA7-201ENST00000356878 PABPN1Q86U42 306 aaKnown RBP eCLIP24.15■■□□□ 1.46
PCDHA7-201ENST00000356878 TRIM26Q12899 539 aaPredicted RBP24.06■■□□□ 1.44
PCDHA7-201ENST00000356878 SMARCA4P51532 1647 aa24.04■■□□□ 1.44
PCDHA7-201ENST00000356878 EIF4G1Q04637 1599 aaKnown RBP23.97■■□□□ 1.43
PCDHA7-201ENST00000356878 CCDC88BA6NC98 1476 aa23.96■■□□□ 1.43
PCDHA7-201ENST00000356878 TOP2AP11388 1531 aaKnown RBP23.95■■□□□ 1.43
PCDHA7-201ENST00000356878 BICRAQ9NZM4 1560 aa23.9■■□□□ 1.42
PCDHA7-201ENST00000356878 ABCC8Q09428 1581 aa23.9■■□□□ 1.42
PCDHA7-201ENST00000356878 SMARCA2P51531 1590 aa23.87■■□□□ 1.41
PCDHA7-201ENST00000356878 PELP1Q8IZL8 1130 aaKnown RBP23.66■■□□□ 1.38
PCDHA7-201ENST00000356878 SOGA1O94964 1423 aa23.66■■□□□ 1.38
PCDHA7-201ENST00000356878 RUSC2Q8N2Y8 1516 aa23.59■■□□□ 1.37
PCDHA7-201ENST00000356878 PEG3Q9GZU2 1588 aa23.5■■□□□ 1.35
PCDHA7-201ENST00000356878 TTBK1Q5TCY1 1321 aaPredicted RBP23.5■■□□□ 1.35
PCDHA7-201ENST00000356878 ATAD2BQ9ULI0 1458 aa23.5■■□□□ 1.35
PCDHA7-201ENST00000356878 CSRNP3Q8WYN3 585 aa23.45■■□□□ 1.34
PCDHA7-201ENST00000356878 WRNQ14191 1432 aaPredicted RBP eCLIP23.42■■□□□ 1.34
PCDHA7-201ENST00000356878 BAZ1BQ9UIG0 1483 aaKnown RBP23.41■■□□□ 1.34
PCDHA7-201ENST00000356878 UBTFP17480 764 aaKnown RBP23.39■■□□□ 1.34
PCDHA7-201ENST00000356878 CEP162Q5TB80 1403 aa23.39■■□□□ 1.34
PCDHA7-201ENST00000356878 SCAF1Q9H7N4 1312 aaKnown RBP23.37■■□□□ 1.33
PCDHA7-201ENST00000356878 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
PCDHA7-201ENST00000356878 ZEB1P37275 1124 aaPredicted RBP23.32■■□□□ 1.32
PCDHA7-201ENST00000356878 TNIKQ9UKE5 1360 aa23.31■■□□□ 1.32
PCDHA7-201ENST00000356878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.29■■□□□ 1.32
PCDHA7-201ENST00000356878 EEA1Q15075 1411 aa23.26■■□□□ 1.31
PCDHA7-201ENST00000356878 GOLGA3Q08378 1498 aa23.19■■□□□ 1.3
PCDHA7-201ENST00000356878 RANGAP1P46060 587 aaPredicted RBP23.14■■□□□ 1.3
PCDHA7-201ENST00000356878 CCER1Q8TC90 406 aaPredicted RBP23.12■■□□□ 1.29
PCDHA7-201ENST00000356878 CEP164Q9UPV0 1460 aa23.06■■□□□ 1.28
PCDHA7-201ENST00000356878 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
PCDHA7-201ENST00000356878 NCAPD3P42695 1498 aa23.02■■□□□ 1.28
PCDHA7-201ENST00000356878 KIF21BO75037 1637 aa23■■□□□ 1.27
PCDHA7-201ENST00000356878 CLIP1P30622 1438 aa22.98■■□□□ 1.27
PCDHA7-201ENST00000356878 TOP2BQ02880 1626 aa22.98■■□□□ 1.27
PCDHA7-201ENST00000356878 HMGXB3Q12766 1538 aa22.94■■□□□ 1.26
PCDHA7-201ENST00000356878 CUX1P39880 1505 aa22.88■■□□□ 1.25
PCDHA7-201ENST00000356878 BIVM-ERCC5R4GMW8 1640 aa22.87■■□□□ 1.25
PCDHA7-201ENST00000356878 HNRNPUL2Q1KMD3 747 aaKnown RBP22.85■■□□□ 1.25
PCDHA7-201ENST00000356878 VPS8Q8N3P4 1428 aa22.82■■□□□ 1.24
PCDHA7-201ENST00000356878 CFTRP13569 1480 aa22.81■■□□□ 1.24
PCDHA7-201ENST00000356878 PRXQ9BXM0 1461 aa22.76■■□□□ 1.23
PCDHA7-201ENST00000356878 APLP2Q06481 763 aa22.73■■□□□ 1.23
PCDHA7-201ENST00000356878 MYT1Q01538 1121 aa22.69■■□□□ 1.22
PCDHA7-201ENST00000356878 KIF27Q86VH2 1401 aa22.68■■□□□ 1.22
PCDHA7-201ENST00000356878 ARAP1Q96P48 1450 aa22.65■■□□□ 1.22
PCDHA7-201ENST00000356878 ERICH3Q5RHP9 1530 aa22.64■■□□□ 1.22
PCDHA7-201ENST00000356878 NEUROD1Q13562 356 aa22.63■■□□□ 1.21
PCDHA7-201ENST00000356878 KANK4Q5T7N3 995 aaPredicted RBP22.63■■□□□ 1.21
PCDHA7-201ENST00000356878 CADPSQ9ULU8 1353 aa22.62■■□□□ 1.21
PCDHA7-201ENST00000356878 CC2D2AQ9P2K1 1620 aa22.58■■□□□ 1.21
PCDHA7-201ENST00000356878 CUX2O14529 1486 aa22.57■■□□□ 1.2
PCDHA7-201ENST00000356878 DIEXFQ68CQ4 756 aaKnown RBP22.56■■□□□ 1.2
PCDHA7-201ENST00000356878 ACIN1Q9UKV3 1341 aaKnown RBP22.54■■□□□ 1.2
PCDHA7-201ENST00000356878 GTF3C3Q9Y5Q9 886 aa22.54■■□□□ 1.2
PCDHA7-201ENST00000356878 IGF1RP08069 1367 aa22.53■■□□□ 1.2
PCDHA7-201ENST00000356878 FGD5Q6ZNL6 1462 aa22.49■■□□□ 1.19
PCDHA7-201ENST00000356878 ARHGAP35Q9NRY4 1499 aa22.48■■□□□ 1.19
PCDHA7-201ENST00000356878 PRDM2Q13029 1718 aa22.48■■□□□ 1.19
PCDHA7-201ENST00000356878 NESP48681 1621 aa22.42■■□□□ 1.18
PCDHA7-201ENST00000356878 CARMIL1Q5VZK9 1371 aa22.41■■□□□ 1.18
PCDHA7-201ENST00000356878 ZNF316A6NFI3 1004 aaPredicted RBP22.41■■□□□ 1.18
PCDHA7-201ENST00000356878 FANCD2Q9BXW9 1451 aa22.41■■□□□ 1.18
PCDHA7-201ENST00000356878 RAD54L2Q9Y4B4 1467 aa22.37■■□□□ 1.17
PCDHA7-201ENST00000356878 P3H3Q8IVL6 736 aa22.37■■□□□ 1.17
PCDHA7-201ENST00000356878 DNAJC5BQ9UF47 199 aa22.37■■□□□ 1.17
PCDHA7-201ENST00000356878 ITGAEP38570 1179 aa22.34■■□□□ 1.17
PCDHA7-201ENST00000356878 DHX57Q6P158 1386 aaKnown RBP22.27■■□□□ 1.16
PCDHA7-201ENST00000356878 RRBP1Q9P2E9 1410 aaKnown RBP22.25■■□□□ 1.15
PCDHA7-201ENST00000356878 POLA1P09884 1462 aaPredicted RBP22.24■■□□□ 1.15
PCDHA7-201ENST00000356878 TOPBP1Q92547 1522 aa22.24■■□□□ 1.15
PCDHA7-201ENST00000356878 ATP1B4Q9UN42 357 aaPredicted RBP22.23■■□□□ 1.15
PCDHA7-201ENST00000356878 CCNB3Q8WWL7 1395 aa22.22■■□□□ 1.15
PCDHA7-201ENST00000356878 DNMBPQ6XZF7 1577 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms