RNA–Protein interactions for RNA: ENST00000355710.7

RET-202, Transcript of ret proto-oncogene, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RET, Length 5,659 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-202ENST00000355710 DCAF8L2P0C7V8 631 aa25.89■■□□□ 1.73
RET-202ENST00000355710 NISCHQ9Y2I1 1504 aa25.48■■□□□ 1.67
RET-202ENST00000355710 SUPT5HO00267 1087 aaKnown RBP24.86■■□□□ 1.57
RET-202ENST00000355710 SHROOM4Q9ULL8 1493 aa24.53■■□□□ 1.52
RET-202ENST00000355710 PELP1Q8IZL8 1130 aaKnown RBP24.04■■□□□ 1.44
RET-202ENST00000355710 EHMT2Q96KQ7 1210 aa23.9■■□□□ 1.42
RET-202ENST00000355710 FAM9AQ8IZU1 332 aaPredicted RBP23.4■■□□□ 1.34
RET-202ENST00000355710 APLP2Q06481 763 aa23.35■■□□□ 1.33
RET-202ENST00000355710 PCGF6Q9BYE7 350 aa23.29■■□□□ 1.32
RET-202ENST00000355710 MYT1Q01538 1121 aa23.23■■□□□ 1.31
RET-202ENST00000355710 TTBK1Q5TCY1 1321 aaPredicted RBP23.12■■□□□ 1.29
RET-202ENST00000355710 ERICH6Q7L0X2 663 aa23.08■■□□□ 1.28
RET-202ENST00000355710 TRIM41Q8WV44 630 aa23.03■■□□□ 1.28
RET-202ENST00000355710 CENPBP07199 599 aaPredicted RBP22.97■■□□□ 1.27
RET-202ENST00000355710 CCER1Q8TC90 406 aaPredicted RBP22.9■■□□□ 1.26
RET-202ENST00000355710 ZEB1P37275 1124 aaPredicted RBP22.83■■□□□ 1.25
RET-202ENST00000355710 RANGAP1P46060 587 aaPredicted RBP22.82■■□□□ 1.24
RET-202ENST00000355710 UBTFP17480 764 aaKnown RBP22.66■■□□□ 1.22
RET-202ENST00000355710 ATP1B4Q9UN42 357 aaPredicted RBP22.53■■□□□ 1.2
RET-202ENST00000355710 PPARGC1BQ86YN6 1023 aaKnown RBP22.4■■□□□ 1.18
RET-202ENST00000355710 TRIM26Q12899 539 aaPredicted RBP22.36■■□□□ 1.17
RET-202ENST00000355710 NEFLP07196 543 aa22.35■■□□□ 1.17
RET-202ENST00000355710 CHIC1Q5VXU3 224 aa22.3■■□□□ 1.16
RET-202ENST00000355710 LOC105371045A0A1W2PR82 267 aa22.23■■□□□ 1.15
RET-202ENST00000355710 YTHDC1Q96MU7 727 aaKnown RBP22.22■■□□□ 1.15
RET-202ENST00000355710 HRCP23327 699 aa22.22■■□□□ 1.15
RET-202ENST00000355710 ABCC9O60706 1549 aa21.95■■□□□ 1.11
RET-202ENST00000355710 ITGAEP38570 1179 aa21.92■■□□□ 1.1
RET-202ENST00000355710 HNRNPUL2Q1KMD3 747 aaKnown RBP21.87■■□□□ 1.09
RET-202ENST00000355710 DAXXQ9UER7 740 aaPredicted RBP21.81■■□□□ 1.08
RET-202ENST00000355710 PABPN1Q86U42 306 aaKnown RBP eCLIP21.75■■□□□ 1.07
RET-202ENST00000355710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.71■■□□□ 1.07
RET-202ENST00000355710 POLR3GLQ9BT43 218 aa21.58■■□□□ 1.05
RET-202ENST00000355710 RTL5Q5HYW3 569 aaPredicted RBP21.55■■□□□ 1.04
RET-202ENST00000355710 DIEXFQ68CQ4 756 aaKnown RBP21.52■■□□□ 1.04
RET-202ENST00000355710 MYT1LQ9UL68 1186 aa21.48■■□□□ 1.03
RET-202ENST00000355710 CNGB1Q14028 1251 aaPredicted RBP21.45■■□□□ 1.02
RET-202ENST00000355710 FAM50AQ14320 339 aaKnown RBP21.4■■□□□ 1.02
RET-202ENST00000355710 ZNF316A6NFI3 1004 aaPredicted RBP21.28■■□□□ 1
RET-202ENST00000355710 NEUROD1Q13562 356 aa21.22■□□□□ 0.99
RET-202ENST00000355710 TRIM52Q96A61 297 aa21.2■□□□□ 0.99
RET-202ENST00000355710 ZCCHC6Q5VYS8 1495 aaKnown RBP21.15■□□□□ 0.98
RET-202ENST00000355710 CSRNP3Q8WYN3 585 aa21.13■□□□□ 0.97
RET-202ENST00000355710 GTF3C3Q9Y5Q9 886 aa21.11■□□□□ 0.97
RET-202ENST00000355710 CLSPNQ9HAW4 1339 aa21.07■□□□□ 0.96
RET-202ENST00000355710 SLC4A1APQ9BWU0 796 aaKnown RBP21.06■□□□□ 0.96
RET-202ENST00000355710 SCRIBQ14160 1630 aa21.03■□□□□ 0.96
RET-202ENST00000355710 ANP32CO43423 234 aa20.99■□□□□ 0.95
RET-202ENST00000355710 BCANQ96GW7 911 aa20.95■□□□□ 0.94
RET-202ENST00000355710 P3H3Q8IVL6 736 aa20.95■□□□□ 0.94
RET-202ENST00000355710 ZNF326Q5BKZ1 582 aaKnown RBP20.94■□□□□ 0.94
RET-202ENST00000355710 CDK11AQ9UQ88 783 aaPredicted RBP20.91■□□□□ 0.94
RET-202ENST00000355710 DCAF1Q9Y4B6 1507 aa20.91■□□□□ 0.94
RET-202ENST00000355710 FBLN2P98095 1184 aa20.89■□□□□ 0.94
RET-202ENST00000355710 ACIN1Q9UKV3 1341 aaKnown RBP20.83■□□□□ 0.92
RET-202ENST00000355710 CCDC180Q9P1Z9 1646 aa20.8■□□□□ 0.92
RET-202ENST00000355710 ARID3CA6NKF2 412 aa20.8■□□□□ 0.92
RET-202ENST00000355710 EIF5BO60841 1220 aaKnown RBP20.77■□□□□ 0.91
RET-202ENST00000355710 ZNF777Q9ULD5 760 aaPredicted RBP20.65■□□□□ 0.9
RET-202ENST00000355710 GLIPR1L2Q4G1C9 344 aa20.64■□□□□ 0.89
RET-202ENST00000355710 ANP32AP39687 249 aaKnown RBP20.61■□□□□ 0.89
RET-202ENST00000355710 TONSLQ96HA7 1378 aa20.58■□□□□ 0.88
RET-202ENST00000355710 MYO15BQ96JP2 1530 aa20.56■□□□□ 0.88
RET-202ENST00000355710 BCL11AQ9H165 835 aa20.53■□□□□ 0.88
RET-202ENST00000355710 RSF1Q96T23 1441 aaPredicted RBP20.49■□□□□ 0.87
RET-202ENST00000355710 CANXP27824 592 aaKnown RBP20.48■□□□□ 0.87
RET-202ENST00000355710 DDX10Q13206 875 aaKnown RBP20.47■□□□□ 0.87
RET-202ENST00000355710 ZBTB47Q9UFB7 747 aaPredicted RBP20.45■□□□□ 0.86
RET-202ENST00000355710 CLIP1P30622 1438 aa20.45■□□□□ 0.86
RET-202ENST00000355710 FKBP8Q14318 412 aa20.43■□□□□ 0.86
RET-202ENST00000355710 HNRNPUQ00839 825 aaKnown RBP eCLIP20.39■□□□□ 0.85
RET-202ENST00000355710 NPM2Q86SE8 214 aaKnown RBP20.39■□□□□ 0.85
RET-202ENST00000355710 CHIC2Q9UKJ5 165 aa20.39■□□□□ 0.85
RET-202ENST00000355710 ANP32BQ92688 251 aaKnown RBP20.38■□□□□ 0.85
RET-202ENST00000355710 RB1CC1Q8TDY2 1594 aa20.36■□□□□ 0.85
RET-202ENST00000355710 NEFMP07197 916 aa20.35■□□□□ 0.85
RET-202ENST00000355710 CEP162Q5TB80 1403 aa20.34■□□□□ 0.85
RET-202ENST00000355710 EEA1Q15075 1411 aa20.34■□□□□ 0.85
RET-202ENST00000355710 FAM9BQ8IZU0 186 aa20.33■□□□□ 0.84
RET-202ENST00000355710 GOLGA3Q08378 1498 aa20.32■□□□□ 0.84
RET-202ENST00000355710 MTUS2Q5JR59 1369 aa20.32■□□□□ 0.84
RET-202ENST00000355710 MIER1Q8N108 512 aa20.28■□□□□ 0.84
RET-202ENST00000355710 SLC24A1O60721 1099 aa20.26■□□□□ 0.83
RET-202ENST00000355710 WRNQ14191 1432 aaPredicted RBP eCLIP20.24■□□□□ 0.83
RET-202ENST00000355710 CHGAP10645 457 aaKnown RBP20.23■□□□□ 0.83
RET-202ENST00000355710 NACADO15069 1562 aa20.21■□□□□ 0.83
RET-202ENST00000355710 SCAF1Q9H7N4 1312 aaKnown RBP20.2■□□□□ 0.82
RET-202ENST00000355710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.19■□□□□ 0.82
RET-202ENST00000355710 NBR1Q14596 966 aa20.19■□□□□ 0.82
RET-202ENST00000355710 HIRIP3Q9BW71 556 aaPredicted RBP20.18■□□□□ 0.82
RET-202ENST00000355710 TMC1Q8TDI8 760 aa20.18■□□□□ 0.82
RET-202ENST00000355710 SALL2Q9Y467 1007 aaPredicted RBP20.17■□□□□ 0.82
RET-202ENST00000355710 TNIKQ9UKE5 1360 aa20.17■□□□□ 0.82
RET-202ENST00000355710 TSPY4P0CV99 314 aa20.17■□□□□ 0.82
RET-202ENST00000355710 TSPY10P0CW01 314 aa20.17■□□□□ 0.82
RET-202ENST00000355710 MRS2Q9HD23 443 aa20.16■□□□□ 0.82
RET-202ENST00000355710 BAZ1BQ9UIG0 1483 aaKnown RBP20.13■□□□□ 0.81
RET-202ENST00000355710 KDM2AQ9Y2K7 1162 aa20.13■□□□□ 0.81
RET-202ENST00000355710 RRP7BPQ9NSQ0 103 aa20.13■□□□□ 0.81
RET-202ENST00000355710 CEP164Q9UPV0 1460 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms