RNA–Protein interactions for RNA: ENST00000353088.6

NSFL1C-202, Transcript of NSFL1 cofactor, humanhuman

TSL 2 BASIC

Gene NSFL1C, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-202ENST00000353088 NISCHQ9Y2I1 1504 aa36.35■■■■□ 3.41
NSFL1C-202ENST00000353088 CCDC180Q9P1Z9 1646 aa31.02■■■□□ 2.56
NSFL1C-202ENST00000353088 SHROOM4Q9ULL8 1493 aa30.93■■■□□ 2.54
NSFL1C-202ENST00000353088 ZCCHC6Q5VYS8 1495 aaKnown RBP30.64■■■□□ 2.49
NSFL1C-202ENST00000353088 DCAF8L2P0C7V8 631 aa30.54■■■□□ 2.48
NSFL1C-202ENST00000353088 SUPT5HO00267 1087 aaKnown RBP30.1■■■□□ 2.41
NSFL1C-202ENST00000353088 DCAF1Q9Y4B6 1507 aa29.69■■■□□ 2.34
NSFL1C-202ENST00000353088 ABCC9O60706 1549 aa29.33■■■□□ 2.29
NSFL1C-202ENST00000353088 SCRIBQ14160 1630 aa29.2■■■□□ 2.26
NSFL1C-202ENST00000353088 MYO15BQ96JP2 1530 aa28.95■■■□□ 2.23
NSFL1C-202ENST00000353088 CHIC1Q5VXU3 224 aa28.94■■■□□ 2.22
NSFL1C-202ENST00000353088 NACADO15069 1562 aa28.79■■■□□ 2.2
NSFL1C-202ENST00000353088 RSF1Q96T23 1441 aaPredicted RBP28.63■■■□□ 2.17
NSFL1C-202ENST00000353088 CECR2Q9BXF3 1484 aa28.49■■■□□ 2.15
NSFL1C-202ENST00000353088 RB1CC1Q8TDY2 1594 aa28.46■■■□□ 2.15
NSFL1C-202ENST00000353088 MROH2BQ7Z745 1585 aa28.31■■■□□ 2.12
NSFL1C-202ENST00000353088 LOC105371045A0A1W2PR82 267 aa28.19■■■□□ 2.1
NSFL1C-202ENST00000353088 WIZO95785 1651 aa28.16■■■□□ 2.1
NSFL1C-202ENST00000353088 UNC13AQ9UPW8 1703 aa28.12■■■□□ 2.09
NSFL1C-202ENST00000353088 PABPN1Q86U42 306 aaKnown RBP eCLIP28.03■■■□□ 2.08
NSFL1C-202ENST00000353088 TRIM41Q8WV44 630 aa27.97■■■□□ 2.07
NSFL1C-202ENST00000353088 BAZ1AQ9NRL2 1556 aaPredicted RBP27.92■■■□□ 2.06
NSFL1C-202ENST00000353088 FAM9AQ8IZU1 332 aaPredicted RBP27.88■■■□□ 2.05
NSFL1C-202ENST00000353088 SMARCA4P51532 1647 aa27.79■■■□□ 2.04
NSFL1C-202ENST00000353088 EHMT2Q96KQ7 1210 aa27.77■■■□□ 2.04
NSFL1C-202ENST00000353088 BICRAQ9NZM4 1560 aa27.76■■■□□ 2.03
NSFL1C-202ENST00000353088 PCGF6Q9BYE7 350 aa27.69■■■□□ 2.02
NSFL1C-202ENST00000353088 TOP2AP11388 1531 aaKnown RBP27.6■■■□□ 2.01
NSFL1C-202ENST00000353088 CCDC88BA6NC98 1476 aa27.55■■■□□ 2
NSFL1C-202ENST00000353088 SMARCA2P51531 1590 aa27.48■■□□□ 1.99
NSFL1C-202ENST00000353088 EIF4G1Q04637 1599 aaKnown RBP27.48■■□□□ 1.99
NSFL1C-202ENST00000353088 ABCC8Q09428 1581 aa27.42■■□□□ 1.98
NSFL1C-202ENST00000353088 HRCP23327 699 aa27.25■■□□□ 1.95
NSFL1C-202ENST00000353088 ATAD2BQ9ULI0 1458 aa27.18■■□□□ 1.94
NSFL1C-202ENST00000353088 PEG3Q9GZU2 1588 aa27.17■■□□□ 1.94
NSFL1C-202ENST00000353088 TRIM26Q12899 539 aaPredicted RBP27.12■■□□□ 1.93
NSFL1C-202ENST00000353088 BAZ1BQ9UIG0 1483 aaKnown RBP27.1■■□□□ 1.93
NSFL1C-202ENST00000353088 SOGA1O94964 1423 aa27.05■■□□□ 1.92
NSFL1C-202ENST00000353088 PPARGC1BQ86YN6 1023 aaKnown RBP27.04■■□□□ 1.92
NSFL1C-202ENST00000353088 RUSC2Q8N2Y8 1516 aa26.98■■□□□ 1.91
NSFL1C-202ENST00000353088 WRNQ14191 1432 aaPredicted RBP eCLIP26.91■■□□□ 1.9
NSFL1C-202ENST00000353088 SYNJ1O43426 1573 aa26.83■■□□□ 1.89
NSFL1C-202ENST00000353088 CSRNP3Q8WYN3 585 aa26.81■■□□□ 1.88
NSFL1C-202ENST00000353088 UBTFP17480 764 aaKnown RBP26.75■■□□□ 1.87
NSFL1C-202ENST00000353088 TTBK1Q5TCY1 1321 aaPredicted RBP26.73■■□□□ 1.87
NSFL1C-202ENST00000353088 NCAPD3P42695 1498 aa26.67■■□□□ 1.86
NSFL1C-202ENST00000353088 CEP162Q5TB80 1403 aa26.67■■□□□ 1.86
NSFL1C-202ENST00000353088 EEA1Q15075 1411 aa26.63■■□□□ 1.85
NSFL1C-202ENST00000353088 HMGXB3Q12766 1538 aa26.61■■□□□ 1.85
NSFL1C-202ENST00000353088 TNIKQ9UKE5 1360 aa26.59■■□□□ 1.85
NSFL1C-202ENST00000353088 GOLGA3Q08378 1498 aa26.53■■□□□ 1.84
NSFL1C-202ENST00000353088 RANGAP1P46060 587 aaPredicted RBP26.51■■□□□ 1.83
NSFL1C-202ENST00000353088 TOP2BQ02880 1626 aa26.46■■□□□ 1.83
NSFL1C-202ENST00000353088 CEP164Q9UPV0 1460 aa26.41■■□□□ 1.82
NSFL1C-202ENST00000353088 RAPGEF2Q9Y4G8 1499 aa26.39■■□□□ 1.81
NSFL1C-202ENST00000353088 CFTRP13569 1480 aa26.37■■□□□ 1.81
NSFL1C-202ENST00000353088 CUX1P39880 1505 aa26.36■■□□□ 1.81
NSFL1C-202ENST00000353088 BIVM-ERCC5R4GMW8 1640 aa26.35■■□□□ 1.81
NSFL1C-202ENST00000353088 KIF21BO75037 1637 aa26.35■■□□□ 1.81
NSFL1C-202ENST00000353088 CC2D2AQ9P2K1 1620 aa26.34■■□□□ 1.81
NSFL1C-202ENST00000353088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.3■■□□□ 1.8
NSFL1C-202ENST00000353088 CLIP1P30622 1438 aa26.26■■□□□ 1.79
NSFL1C-202ENST00000353088 ZEB1P37275 1124 aaPredicted RBP26.21■■□□□ 1.79
NSFL1C-202ENST00000353088 CADPSQ9ULU8 1353 aa26.19■■□□□ 1.78
NSFL1C-202ENST00000353088 CCER1Q8TC90 406 aaPredicted RBP26.12■■□□□ 1.77
NSFL1C-202ENST00000353088 PRDM2Q13029 1718 aa26.09■■□□□ 1.77
NSFL1C-202ENST00000353088 KIF27Q86VH2 1401 aa26.09■■□□□ 1.77
NSFL1C-202ENST00000353088 PRXQ9BXM0 1461 aa26.09■■□□□ 1.77
NSFL1C-202ENST00000353088 VPS8Q8N3P4 1428 aa26.04■■□□□ 1.76
NSFL1C-202ENST00000353088 NESP48681 1621 aa26.02■■□□□ 1.76
NSFL1C-202ENST00000353088 CUX2O14529 1486 aa26.01■■□□□ 1.75
NSFL1C-202ENST00000353088 DNAJC5BQ9UF47 199 aa26■■□□□ 1.75
NSFL1C-202ENST00000353088 ERICH3Q5RHP9 1530 aa25.98■■□□□ 1.75
NSFL1C-202ENST00000353088 APLP2Q06481 763 aa25.98■■□□□ 1.75
NSFL1C-202ENST00000353088 FGD5Q6ZNL6 1462 aa25.97■■□□□ 1.75
NSFL1C-202ENST00000353088 FANCD2Q9BXW9 1451 aa25.96■■□□□ 1.75
NSFL1C-202ENST00000353088 HNRNPUL2Q1KMD3 747 aaKnown RBP25.95■■□□□ 1.74
NSFL1C-202ENST00000353088 ARAP1Q96P48 1450 aa25.89■■□□□ 1.73
NSFL1C-202ENST00000353088 IGF1RP08069 1367 aa25.88■■□□□ 1.73
NSFL1C-202ENST00000353088 RAD54L2Q9Y4B4 1467 aa25.83■■□□□ 1.72
NSFL1C-202ENST00000353088 KANK4Q5T7N3 995 aaPredicted RBP25.79■■□□□ 1.72
NSFL1C-202ENST00000353088 CARMIL1Q5VZK9 1371 aa25.78■■□□□ 1.72
NSFL1C-202ENST00000353088 ARHGAP35Q9NRY4 1499 aa25.75■■□□□ 1.71
NSFL1C-202ENST00000353088 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
NSFL1C-202ENST00000353088 POLA1P09884 1462 aaPredicted RBP25.71■■□□□ 1.71
NSFL1C-202ENST00000353088 DNMBPQ6XZF7 1577 aa25.71■■□□□ 1.71
NSFL1C-202ENST00000353088 P3H3Q8IVL6 736 aa25.67■■□□□ 1.7
NSFL1C-202ENST00000353088 URB2Q14146 1524 aaKnown RBP25.62■■□□□ 1.69
NSFL1C-202ENST00000353088 LAMC3Q9Y6N6 1575 aa25.6■■□□□ 1.69
NSFL1C-202ENST00000353088 ABCA10Q8WWZ4 1543 aa25.58■■□□□ 1.69
NSFL1C-202ENST00000353088 TDRD9Q8NDG6 1382 aaKnown RBP25.55■■□□□ 1.68
NSFL1C-202ENST00000353088 ATP1B4Q9UN42 357 aaPredicted RBP25.53■■□□□ 1.68
NSFL1C-202ENST00000353088 KIF21AQ7Z4S6 1674 aa25.5■■□□□ 1.67
NSFL1C-202ENST00000353088 ITGAEP38570 1179 aa25.49■■□□□ 1.67
NSFL1C-202ENST00000353088 PDS5BQ9NTI5 1447 aa25.48■■□□□ 1.67
NSFL1C-202ENST00000353088 FHOD3Q2V2M9 1422 aa25.43■■□□□ 1.66
NSFL1C-202ENST00000353088 WDR97A6NE52 1622 aa25.39■■□□□ 1.65
NSFL1C-202ENST00000353088 GAPVD1Q14C86 1478 aa25.35■■□□□ 1.65
NSFL1C-202ENST00000353088 TIAM1Q13009 1591 aa25.35■■□□□ 1.65
NSFL1C-202ENST00000353088 CUL7Q14999 1698 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms