RNA–Protein interactions for RNA: ENST00000352011.7

ATP2A3-202, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 3,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-202ENST00000352011 NISCHQ9Y2I1 1504 aa30.6■■■□□ 2.49
ATP2A3-202ENST00000352011 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
ATP2A3-202ENST00000352011 DCAF8L2P0C7V8 631 aa26.68■■□□□ 1.86
ATP2A3-202ENST00000352011 SUPT5HO00267 1087 aaKnown RBP26.36■■□□□ 1.81
ATP2A3-202ENST00000352011 ZCCHC6Q5VYS8 1495 aaKnown RBP25.73■■□□□ 1.71
ATP2A3-202ENST00000352011 CCDC180Q9P1Z9 1646 aa25.66■■□□□ 1.7
ATP2A3-202ENST00000352011 CHIC1Q5VXU3 224 aa25.07■■□□□ 1.6
ATP2A3-202ENST00000352011 ABCC9O60706 1549 aa24.88■■□□□ 1.57
ATP2A3-202ENST00000352011 MYO15BQ96JP2 1530 aa24.79■■□□□ 1.56
ATP2A3-202ENST00000352011 SCRIBQ14160 1630 aa24.7■■□□□ 1.54
ATP2A3-202ENST00000352011 DCAF1Q9Y4B6 1507 aa24.68■■□□□ 1.54
ATP2A3-202ENST00000352011 LOC105371045A0A1W2PR82 267 aa24.67■■□□□ 1.54
ATP2A3-202ENST00000352011 EHMT2Q96KQ7 1210 aa24.65■■□□□ 1.54
ATP2A3-202ENST00000352011 FAM9AQ8IZU1 332 aaPredicted RBP24.52■■□□□ 1.52
ATP2A3-202ENST00000352011 PCGF6Q9BYE7 350 aa24.49■■□□□ 1.51
ATP2A3-202ENST00000352011 TRIM41Q8WV44 630 aa24.32■■□□□ 1.48
ATP2A3-202ENST00000352011 RSF1Q96T23 1441 aaPredicted RBP24.31■■□□□ 1.48
ATP2A3-202ENST00000352011 CECR2Q9BXF3 1484 aa24.18■■□□□ 1.46
ATP2A3-202ENST00000352011 PABPN1Q86U42 306 aaKnown RBP eCLIP24.06■■□□□ 1.44
ATP2A3-202ENST00000352011 RB1CC1Q8TDY2 1594 aa24.02■■□□□ 1.44
ATP2A3-202ENST00000352011 NACADO15069 1562 aa24.01■■□□□ 1.43
ATP2A3-202ENST00000352011 HRCP23327 699 aa23.95■■□□□ 1.42
ATP2A3-202ENST00000352011 MROH2BQ7Z745 1585 aa23.94■■□□□ 1.42
ATP2A3-202ENST00000352011 PPARGC1BQ86YN6 1023 aaKnown RBP23.92■■□□□ 1.42
ATP2A3-202ENST00000352011 WIZO95785 1651 aa23.77■■□□□ 1.4
ATP2A3-202ENST00000352011 TTBK1Q5TCY1 1321 aaPredicted RBP23.73■■□□□ 1.39
ATP2A3-202ENST00000352011 TRIM26Q12899 539 aaPredicted RBP23.68■■□□□ 1.38
ATP2A3-202ENST00000352011 BAZ1AQ9NRL2 1556 aaPredicted RBP23.48■■□□□ 1.35
ATP2A3-202ENST00000352011 RANGAP1P46060 587 aaPredicted RBP23.38■■□□□ 1.33
ATP2A3-202ENST00000352011 ABCC8Q09428 1581 aa23.37■■□□□ 1.33
ATP2A3-202ENST00000352011 UBTFP17480 764 aaKnown RBP23.35■■□□□ 1.33
ATP2A3-202ENST00000352011 CCDC88BA6NC98 1476 aa23.35■■□□□ 1.33
ATP2A3-202ENST00000352011 SMARCA4P51532 1647 aa23.28■■□□□ 1.32
ATP2A3-202ENST00000352011 UNC13AQ9UPW8 1703 aa23.23■■□□□ 1.31
ATP2A3-202ENST00000352011 TOP2AP11388 1531 aaKnown RBP23.19■■□□□ 1.3
ATP2A3-202ENST00000352011 SOGA1O94964 1423 aa23.19■■□□□ 1.3
ATP2A3-202ENST00000352011 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.15■■□□□ 1.3
ATP2A3-202ENST00000352011 SMARCA2P51531 1590 aa23.12■■□□□ 1.29
ATP2A3-202ENST00000352011 CSRNP3Q8WYN3 585 aa23.1■■□□□ 1.29
ATP2A3-202ENST00000352011 BICRAQ9NZM4 1560 aa23.09■■□□□ 1.29
ATP2A3-202ENST00000352011 RUSC2Q8N2Y8 1516 aa23.08■■□□□ 1.28
ATP2A3-202ENST00000352011 CCER1Q8TC90 406 aaPredicted RBP23.04■■□□□ 1.28
ATP2A3-202ENST00000352011 WRNQ14191 1432 aaPredicted RBP eCLIP22.93■■□□□ 1.26
ATP2A3-202ENST00000352011 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
ATP2A3-202ENST00000352011 ZEB1P37275 1124 aaPredicted RBP22.92■■□□□ 1.26
ATP2A3-202ENST00000352011 EIF4G1Q04637 1599 aaKnown RBP22.92■■□□□ 1.26
ATP2A3-202ENST00000352011 CEP162Q5TB80 1403 aa22.91■■□□□ 1.26
ATP2A3-202ENST00000352011 ATAD2BQ9ULI0 1458 aa22.89■■□□□ 1.25
ATP2A3-202ENST00000352011 HNRNPUL2Q1KMD3 747 aaKnown RBP22.8■■□□□ 1.24
ATP2A3-202ENST00000352011 APLP2Q06481 763 aa22.74■■□□□ 1.23
ATP2A3-202ENST00000352011 TNIKQ9UKE5 1360 aa22.73■■□□□ 1.23
ATP2A3-202ENST00000352011 SYNJ1O43426 1573 aa22.67■■□□□ 1.22
ATP2A3-202ENST00000352011 GOLGA3Q08378 1498 aa22.65■■□□□ 1.22
ATP2A3-202ENST00000352011 EEA1Q15075 1411 aa22.61■■□□□ 1.21
ATP2A3-202ENST00000352011 CLIP1P30622 1438 aa22.57■■□□□ 1.2
ATP2A3-202ENST00000352011 RAPGEF2Q9Y4G8 1499 aa22.54■■□□□ 1.2
ATP2A3-202ENST00000352011 PEG3Q9GZU2 1588 aa22.54■■□□□ 1.2
ATP2A3-202ENST00000352011 CEP164Q9UPV0 1460 aa22.51■■□□□ 1.19
ATP2A3-202ENST00000352011 ITGAEP38570 1179 aa22.45■■□□□ 1.18
ATP2A3-202ENST00000352011 ATP1B4Q9UN42 357 aaPredicted RBP22.44■■□□□ 1.18
ATP2A3-202ENST00000352011 P3H3Q8IVL6 736 aa22.36■■□□□ 1.17
ATP2A3-202ENST00000352011 NCAPD3P42695 1498 aa22.34■■□□□ 1.17
ATP2A3-202ENST00000352011 DIEXFQ68CQ4 756 aaKnown RBP22.32■■□□□ 1.16
ATP2A3-202ENST00000352011 KANK4Q5T7N3 995 aaPredicted RBP22.3■■□□□ 1.16
ATP2A3-202ENST00000352011 VPS8Q8N3P4 1428 aa22.28■■□□□ 1.16
ATP2A3-202ENST00000352011 CUX1P39880 1505 aa22.24■■□□□ 1.15
ATP2A3-202ENST00000352011 KIF27Q86VH2 1401 aa22.23■■□□□ 1.15
ATP2A3-202ENST00000352011 TOP2BQ02880 1626 aa22.23■■□□□ 1.15
ATP2A3-202ENST00000352011 YTHDC1Q96MU7 727 aaKnown RBP22.21■■□□□ 1.15
ATP2A3-202ENST00000352011 KIF21BO75037 1637 aa22.2■■□□□ 1.14
ATP2A3-202ENST00000352011 CUX2O14529 1486 aa22.18■■□□□ 1.14
ATP2A3-202ENST00000352011 CFTRP13569 1480 aa22.16■■□□□ 1.14
ATP2A3-202ENST00000352011 HMGXB3Q12766 1538 aa22.15■■□□□ 1.14
ATP2A3-202ENST00000352011 DNAJC5BQ9UF47 199 aa22.15■■□□□ 1.14
ATP2A3-202ENST00000352011 CADPSQ9ULU8 1353 aa22.14■■□□□ 1.13
ATP2A3-202ENST00000352011 PRXQ9BXM0 1461 aa22.08■■□□□ 1.13
ATP2A3-202ENST00000352011 ZNF316A6NFI3 1004 aaPredicted RBP22.08■■□□□ 1.12
ATP2A3-202ENST00000352011 SCAF1Q9H7N4 1312 aaKnown RBP22.07■■□□□ 1.12
ATP2A3-202ENST00000352011 ARAP1Q96P48 1450 aa22.06■■□□□ 1.12
ATP2A3-202ENST00000352011 IGF1RP08069 1367 aa22.03■■□□□ 1.12
ATP2A3-202ENST00000352011 FAM50AQ14320 339 aaKnown RBP22.03■■□□□ 1.12
ATP2A3-202ENST00000352011 CARMIL1Q5VZK9 1371 aa22.02■■□□□ 1.12
ATP2A3-202ENST00000352011 NESP48681 1621 aa22.02■■□□□ 1.12
ATP2A3-202ENST00000352011 CC2D2AQ9P2K1 1620 aa22.01■■□□□ 1.11
ATP2A3-202ENST00000352011 NEUROD1Q13562 356 aa22■■□□□ 1.11
ATP2A3-202ENST00000352011 BIVM-ERCC5R4GMW8 1640 aa22■■□□□ 1.11
ATP2A3-202ENST00000352011 FGD5Q6ZNL6 1462 aa21.99■■□□□ 1.11
ATP2A3-202ENST00000352011 RAD54L2Q9Y4B4 1467 aa21.97■■□□□ 1.11
ATP2A3-202ENST00000352011 FANCD2Q9BXW9 1451 aa21.94■■□□□ 1.1
ATP2A3-202ENST00000352011 PELP1Q8IZL8 1130 aaKnown RBP21.92■■□□□ 1.1
ATP2A3-202ENST00000352011 ARID3CA6NKF2 412 aa21.91■■□□□ 1.1
ATP2A3-202ENST00000352011 ARHGAP35Q9NRY4 1499 aa21.9■■□□□ 1.1
ATP2A3-202ENST00000352011 MIER1Q8N108 512 aa21.9■■□□□ 1.1
ATP2A3-202ENST00000352011 ERICH3Q5RHP9 1530 aa21.89■■□□□ 1.09
ATP2A3-202ENST00000352011 TDRD9Q8NDG6 1382 aaKnown RBP21.88■■□□□ 1.09
ATP2A3-202ENST00000352011 ACIN1Q9UKV3 1341 aaKnown RBP21.86■■□□□ 1.09
ATP2A3-202ENST00000352011 CENPBP07199 599 aaPredicted RBP21.86■■□□□ 1.09
ATP2A3-202ENST00000352011 GTF3C3Q9Y5Q9 886 aa21.82■■□□□ 1.08
ATP2A3-202ENST00000352011 CCNB3Q8WWL7 1395 aa21.81■■□□□ 1.08
ATP2A3-202ENST00000352011 FHOD3Q2V2M9 1422 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 674.8 ms