RNA–Protein interactions for RNA: ENST00000348911.10

SBF1-201, Transcript of SET binding factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SBF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-201ENST00000348911 DCAF8L2P0C7V8 631 aa26.04■■□□□ 1.76
SBF1-201ENST00000348911 NISCHQ9Y2I1 1504 aa25.59■■□□□ 1.69
SBF1-201ENST00000348911 SUPT5HO00267 1087 aaKnown RBP25.34■■□□□ 1.65
SBF1-201ENST00000348911 SHROOM4Q9ULL8 1493 aa24.9■■□□□ 1.58
SBF1-201ENST00000348911 EHMT2Q96KQ7 1210 aa24.39■■□□□ 1.49
SBF1-201ENST00000348911 PELP1Q8IZL8 1130 aaKnown RBP24.11■■□□□ 1.45
SBF1-201ENST00000348911 PCGF6Q9BYE7 350 aa24.11■■□□□ 1.45
SBF1-201ENST00000348911 FAM9AQ8IZU1 332 aaPredicted RBP23.85■■□□□ 1.41
SBF1-201ENST00000348911 APLP2Q06481 763 aa23.8■■□□□ 1.4
SBF1-201ENST00000348911 ZEB1P37275 1124 aaPredicted RBP23.67■■□□□ 1.38
SBF1-201ENST00000348911 TTBK1Q5TCY1 1321 aaPredicted RBP23.65■■□□□ 1.38
SBF1-201ENST00000348911 CENPBP07199 599 aaPredicted RBP23.57■■□□□ 1.36
SBF1-201ENST00000348911 CCER1Q8TC90 406 aaPredicted RBP23.45■■□□□ 1.34
SBF1-201ENST00000348911 TRIM41Q8WV44 630 aa23.45■■□□□ 1.34
SBF1-201ENST00000348911 RANGAP1P46060 587 aaPredicted RBP23.18■■□□□ 1.3
SBF1-201ENST00000348911 HRCP23327 699 aa23.17■■□□□ 1.3
SBF1-201ENST00000348911 ERICH6Q7L0X2 663 aa23.13■■□□□ 1.29
SBF1-201ENST00000348911 TRIM26Q12899 539 aaPredicted RBP23.09■■□□□ 1.29
SBF1-201ENST00000348911 YTHDC1Q96MU7 727 aaKnown RBP23.07■■□□□ 1.28
SBF1-201ENST00000348911 UBTFP17480 764 aaKnown RBP23.03■■□□□ 1.28
SBF1-201ENST00000348911 MYT1Q01538 1121 aa23.03■■□□□ 1.28
SBF1-201ENST00000348911 PPARGC1BQ86YN6 1023 aaKnown RBP22.96■■□□□ 1.27
SBF1-201ENST00000348911 NEFLP07196 543 aa22.84■■□□□ 1.25
SBF1-201ENST00000348911 ATP1B4Q9UN42 357 aaPredicted RBP22.84■■□□□ 1.25
SBF1-201ENST00000348911 CHIC1Q5VXU3 224 aa22.81■■□□□ 1.24
SBF1-201ENST00000348911 LOC105371045A0A1W2PR82 267 aa22.79■■□□□ 1.24
SBF1-201ENST00000348911 HNRNPUL2Q1KMD3 747 aaKnown RBP22.38■■□□□ 1.17
SBF1-201ENST00000348911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.35■■□□□ 1.17
SBF1-201ENST00000348911 ITGAEP38570 1179 aa22.34■■□□□ 1.17
SBF1-201ENST00000348911 DIEXFQ68CQ4 756 aaKnown RBP22.33■■□□□ 1.17
SBF1-201ENST00000348911 POLR3GLQ9BT43 218 aa22.07■■□□□ 1.12
SBF1-201ENST00000348911 GTF3C3Q9Y5Q9 886 aa22.04■■□□□ 1.12
SBF1-201ENST00000348911 DAXXQ9UER7 740 aaPredicted RBP22.04■■□□□ 1.12
SBF1-201ENST00000348911 CNGB1Q14028 1251 aaPredicted RBP21.91■■□□□ 1.1
SBF1-201ENST00000348911 ZNF316A6NFI3 1004 aaPredicted RBP21.79■■□□□ 1.08
SBF1-201ENST00000348911 ACIN1Q9UKV3 1341 aaKnown RBP21.79■■□□□ 1.08
SBF1-201ENST00000348911 FAM50AQ14320 339 aaKnown RBP21.78■■□□□ 1.08
SBF1-201ENST00000348911 BCANQ96GW7 911 aa21.77■■□□□ 1.08
SBF1-201ENST00000348911 RTL5Q5HYW3 569 aaPredicted RBP21.76■■□□□ 1.07
SBF1-201ENST00000348911 NEUROD1Q13562 356 aa21.72■■□□□ 1.07
SBF1-201ENST00000348911 MYT1LQ9UL68 1186 aa21.65■■□□□ 1.06
SBF1-201ENST00000348911 ANP32CO43423 234 aa21.62■■□□□ 1.05
SBF1-201ENST00000348911 TRIM52Q96A61 297 aa21.59■■□□□ 1.05
SBF1-201ENST00000348911 DCAF1Q9Y4B6 1507 aa21.58■■□□□ 1.04
SBF1-201ENST00000348911 CDK11AQ9UQ88 783 aaPredicted RBP21.55■■□□□ 1.04
SBF1-201ENST00000348911 CLSPNQ9HAW4 1339 aa21.53■■□□□ 1.04
SBF1-201ENST00000348911 ABCC9O60706 1549 aa21.5■■□□□ 1.03
SBF1-201ENST00000348911 PABPN1Q86U42 306 aaKnown RBP eCLIP21.48■■□□□ 1.039e-7■■■□□ 16.3
SBF1-201ENST00000348911 SLC4A1APQ9BWU0 796 aaKnown RBP21.43■■□□□ 1.02
SBF1-201ENST00000348911 CSRNP3Q8WYN3 585 aa21.43■■□□□ 1.02
SBF1-201ENST00000348911 ZNF326Q5BKZ1 582 aaKnown RBP21.34■■□□□ 1.01
SBF1-201ENST00000348911 ZCCHC6Q5VYS8 1495 aaKnown RBP21.29■■□□□ 1
SBF1-201ENST00000348911 SCAF1Q9H7N4 1312 aaKnown RBP21.26■□□□□ 0.99
SBF1-201ENST00000348911 FKBP8Q14318 412 aa21.22■□□□□ 0.99
SBF1-201ENST00000348911 P3H3Q8IVL6 736 aa21.18■□□□□ 0.98
SBF1-201ENST00000348911 MYO15BQ96JP2 1530 aa21.16■□□□□ 0.98
SBF1-201ENST00000348911 ANP32AP39687 249 aaKnown RBP21.16■□□□□ 0.98
SBF1-201ENST00000348911 SCRIBQ14160 1630 aa21.13■□□□□ 0.97
SBF1-201ENST00000348911 DDX10Q13206 875 aaKnown RBP21.06■□□□□ 0.96
SBF1-201ENST00000348911 CANXP27824 592 aaKnown RBP21.04■□□□□ 0.96
SBF1-201ENST00000348911 TONSLQ96HA7 1378 aa21.04■□□□□ 0.96
SBF1-201ENST00000348911 NPM2Q86SE8 214 aaKnown RBP21.03■□□□□ 0.96
SBF1-201ENST00000348911 HNRNPUQ00839 825 aaKnown RBP eCLIP21.02■□□□□ 0.96
SBF1-201ENST00000348911 MIER1Q8N108 512 aa21.02■□□□□ 0.96
SBF1-201ENST00000348911 ARID3CA6NKF2 412 aa20.99■□□□□ 0.95
SBF1-201ENST00000348911 ZBTB47Q9UFB7 747 aaPredicted RBP20.95■□□□□ 0.94
SBF1-201ENST00000348911 FAM9BQ8IZU0 186 aa20.91■□□□□ 0.94
SBF1-201ENST00000348911 CCDC180Q9P1Z9 1646 aa20.91■□□□□ 0.94
SBF1-201ENST00000348911 FBLN2P98095 1184 aa20.9■□□□□ 0.94
SBF1-201ENST00000348911 ZNF777Q9ULD5 760 aaPredicted RBP20.87■□□□□ 0.93
SBF1-201ENST00000348911 BCL11AQ9H165 835 aa20.81■□□□□ 0.92
SBF1-201ENST00000348911 CLIP1P30622 1438 aa20.78■□□□□ 0.92
SBF1-201ENST00000348911 CCDC136Q96JN2 1154 aa20.76■□□□□ 0.91
SBF1-201ENST00000348911 NBR1Q14596 966 aa20.76■□□□□ 0.91
SBF1-201ENST00000348911 NEFMP07197 916 aa20.74■□□□□ 0.91
SBF1-201ENST00000348911 CEP162Q5TB80 1403 aa20.73■□□□□ 0.91
SBF1-201ENST00000348911 EIF5BO60841 1220 aaKnown RBP20.72■□□□□ 0.91
SBF1-201ENST00000348911 IRX6P78412 446 aaPredicted RBP20.72■□□□□ 0.91
SBF1-201ENST00000348911 MRS2Q9HD23 443 aa20.7■□□□□ 0.91
SBF1-201ENST00000348911 HIRIP3Q9BW71 556 aaPredicted RBP20.7■□□□□ 0.9
SBF1-201ENST00000348911 SALL2Q9Y467 1007 aaPredicted RBP20.7■□□□□ 0.9
SBF1-201ENST00000348911 CHIC2Q9UKJ5 165 aa20.7■□□□□ 0.9
SBF1-201ENST00000348911 TMC1Q8TDI8 760 aa20.69■□□□□ 0.9
SBF1-201ENST00000348911 RSF1Q96T23 1441 aaPredicted RBP20.68■□□□□ 0.9
SBF1-201ENST00000348911 GOLGA3Q08378 1498 aa20.66■□□□□ 0.9
SBF1-201ENST00000348911 UPF2Q9HAU5 1272 aaKnown RBP20.63■□□□□ 0.89
SBF1-201ENST00000348911 EEA1Q15075 1411 aa20.62■□□□□ 0.89
SBF1-201ENST00000348911 SLC24A1O60721 1099 aa20.61■□□□□ 0.89
SBF1-201ENST00000348911 ANP32BQ92688 251 aaKnown RBP20.58■□□□□ 0.89
SBF1-201ENST00000348911 HSP90AA1P07900 732 aaKnown RBP20.57■□□□□ 0.88
SBF1-201ENST00000348911 ANP32EQ9BTT0 268 aa20.57■□□□□ 0.88
SBF1-201ENST00000348911 MTUS2Q5JR59 1369 aa20.57■□□□□ 0.88
SBF1-201ENST00000348911 EIF4G2P78344 907 aaKnown RBP eCLIP20.55■□□□□ 0.88
SBF1-201ENST00000348911 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.55■□□□□ 0.88
SBF1-201ENST00000348911 TNIKQ9UKE5 1360 aa20.53■□□□□ 0.88
SBF1-201ENST00000348911 WDR43Q15061 677 aaKnown RBP eCLIP20.49■□□□□ 0.877e-6■■□□□ 11.7
SBF1-201ENST00000348911 KDM2AQ9Y2K7 1162 aa20.48■□□□□ 0.87
SBF1-201ENST00000348911 RRP7BPQ9NSQ0 103 aa20.45■□□□□ 0.86
SBF1-201ENST00000348911 CHGAP10645 457 aaKnown RBP20.44■□□□□ 0.86
SBF1-201ENST00000348911 SUPT16HQ9Y5B9 1047 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms