RNA–Protein interactions for RNA: ENST00000348603.2

CCNB3-202, Transcript of cyclin B3, humanhuman

TSL 1 (best) BASIC

Gene CCNB3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-202ENST00000348603 AEBP2Q6ZN18 517 aaPredicted RBP26.48■■□□□ 1.83
CCNB3-202ENST00000348603 CHIC1Q5VXU3 224 aa24.93■■□□□ 1.58
CCNB3-202ENST00000348603 SENP3Q9H4L4 574 aaPredicted RBP22.82■■□□□ 1.24
CCNB3-202ENST00000348603 PHF23Q9BUL5 403 aaPredicted RBP22.38■■□□□ 1.17
CCNB3-202ENST00000348603 FOXD1Q16676 465 aa21.22■□□□□ 0.99
CCNB3-202ENST00000348603 POTEDQ86YR6 584 aa20.37■□□□□ 0.85
CCNB3-202ENST00000348603 MSH5O43196 834 aa20.17■□□□□ 0.82
CCNB3-202ENST00000348603 PIAS4Q8N2W9 510 aaPredicted RBP19.79■□□□□ 0.76
CCNB3-202ENST00000348603 PLPPR3Q6T4P5 718 aa19.66■□□□□ 0.74
CCNB3-202ENST00000348603 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
CCNB3-202ENST00000348603 ADRA2BP18089 450 aa19.37■□□□□ 0.69
CCNB3-202ENST00000348603 DMRT2Q9Y5R5 561 aa17.98■□□□□ 0.47
CCNB3-202ENST00000348603 SCAF1Q9H7N4 1312 aaKnown RBP17.92■□□□□ 0.46
CCNB3-202ENST00000348603 MAPK8IP2Q13387 824 aaPredicted RBP17.9■□□□□ 0.46
CCNB3-202ENST00000348603 CACNB1Q02641 598 aaPredicted RBP17.57■□□□□ 0.4
CCNB3-202ENST00000348603 DCAF8L1A6NGE4 600 aa17.31■□□□□ 0.36
CCNB3-202ENST00000348603 HOXD11P31277 338 aaPredicted RBP17.13■□□□□ 0.33
CCNB3-202ENST00000348603 PPP4R3CPQ6ZMV5 832 aa17.12■□□□□ 0.33
CCNB3-202ENST00000348603 RNF39Q9H2S5 420 aa17.09■□□□□ 0.33
CCNB3-202ENST00000348603 CNKSR2Q8WXI2 1034 aa16.95■□□□□ 0.3
CCNB3-202ENST00000348603 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
CCNB3-202ENST00000348603 C1QBPQ07021 282 aaKnown RBP16.87■□□□□ 0.29
CCNB3-202ENST00000348603 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
CCNB3-202ENST00000348603 NCBP3Q53F19 620 aaKnown RBP16.43■□□□□ 0.22
CCNB3-202ENST00000348603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.38■□□□□ 0.21
CCNB3-202ENST00000348603 NPM3O75607 178 aaKnown RBP16.05■□□□□ 0.16
CCNB3-202ENST00000348603 POTEHQ6S545 545 aa15.91■□□□□ 0.14
CCNB3-202ENST00000348603 U3KPZ7 1027 aaPredicted RBP15.9■□□□□ 0.14
CCNB3-202ENST00000348603 CAPN15O75808 1086 aa15.88■□□□□ 0.13
CCNB3-202ENST00000348603 DSG3P32926 999 aa15.83■□□□□ 0.12
CCNB3-202ENST00000348603 SPINK5Q9NQ38 1064 aaPredicted RBP15.79■□□□□ 0.12
CCNB3-202ENST00000348603 APLP2Q06481 763 aa15.62■□□□□ 0.09
CCNB3-202ENST00000348603 ZNF219Q9P2Y4 722 aaPredicted RBP15.51■□□□□ 0.07
CCNB3-202ENST00000348603 TRHP20396 242 aaPredicted RBP15.49■□□□□ 0.07
CCNB3-202ENST00000348603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.44■□□□□ 0.06
CCNB3-202ENST00000348603 HNRNPUL2Q1KMD3 747 aaKnown RBP15.44■□□□□ 0.06
CCNB3-202ENST00000348603 ABCB7O75027 752 aa15.41■□□□□ 0.06
CCNB3-202ENST00000348603 SLC4A2P04920 1241 aa15.41■□□□□ 0.06
CCNB3-202ENST00000348603 KCNA4P22459 653 aa15.3■□□□□ 0.04
CCNB3-202ENST00000348603 SAMD1Q6SPF0 538 aaPredicted RBP15.29■□□□□ 0.04
CCNB3-202ENST00000348603 RBM42Q9BTD8 480 aaKnown RBP15.25■□□□□ 0.03
CCNB3-202ENST00000348603 CHRDL2Q6WN34 429 aa15.02■□□□□ -0
CCNB3-202ENST00000348603 POLA2Q14181 598 aa14.95□□□□□ -0.02
CCNB3-202ENST00000348603 MYCNP04198 464 aaPredicted RBP14.94□□□□□ -0.02
CCNB3-202ENST00000348603 AKT1S1Q96B36 256 aa14.75□□□□□ -0.05
CCNB3-202ENST00000348603 ZBTB12Q9Y330 459 aaPredicted RBP14.73□□□□□ -0.05
CCNB3-202ENST00000348603 SP7Q8TDD2 431 aaPredicted RBP14.71□□□□□ -0.05
CCNB3-202ENST00000348603 REM2Q8IYK8 340 aaPredicted RBP14.56□□□□□ -0.08
CCNB3-202ENST00000348603 PIP4P2Q8N4L2 257 aa14.53□□□□□ -0.08
CCNB3-202ENST00000348603 FOXD4L1Q9NU39 408 aa14.51□□□□□ -0.09
CCNB3-202ENST00000348603 ATF5Q9Y2D1 282 aaPredicted RBP14.49□□□□□ -0.09
CCNB3-202ENST00000348603 OSCARQ8IYS5 282 aa14.48□□□□□ -0.09
CCNB3-202ENST00000348603 HAX1O00165 279 aa14.45□□□□□ -0.1
CCNB3-202ENST00000348603 SLC4A1APQ9BWU0 796 aaKnown RBP14.43□□□□□ -0.1
CCNB3-202ENST00000348603 PITPNM1O00562 1244 aa14.4□□□□□ -0.1
CCNB3-202ENST00000348603 FXR2P51116 673 aaKnown RBP eCLIP14.37□□□□□ -0.11
CCNB3-202ENST00000348603 SPDYE2BA6NHP3 402 aa14.18□□□□□ -0.14
CCNB3-202ENST00000348603 SPDYE6P0CI01 402 aa14.18□□□□□ -0.14
CCNB3-202ENST00000348603 SPDYE2Q495Y8 402 aa14.18□□□□□ -0.14
CCNB3-202ENST00000348603 ATXN8OSP0DMR3 200 aa14.15□□□□□ -0.14
CCNB3-202ENST00000348603 FBLN2P98095 1184 aa14.15□□□□□ -0.14
CCNB3-202ENST00000348603 EVX2Q03828 476 aa14.09□□□□□ -0.15
CCNB3-202ENST00000348603 PRKAR2AP13861 404 aaKnown RBP14.05□□□□□ -0.16
CCNB3-202ENST00000348603 SPDYE1Q8NFV5 336 aaPredicted RBP14.05□□□□□ -0.16
CCNB3-202ENST00000348603 CLEC11AQ9Y240 323 aa14.03□□□□□ -0.16
CCNB3-202ENST00000348603 ZBTB22O15209 634 aa14□□□□□ -0.17
CCNB3-202ENST00000348603 C19orf67A6NJJ6 358 aa13.94□□□□□ -0.18
CCNB3-202ENST00000348603 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
CCNB3-202ENST00000348603 SSUH2Q9Y2M2 353 aa13.87□□□□□ -0.19
CCNB3-202ENST00000348603 GABBR2O75899 941 aa13.84□□□□□ -0.19
CCNB3-202ENST00000348603 MKRN4PQ13434 485 aaPredicted RBP13.81□□□□□ -0.2
CCNB3-202ENST00000348603 LHX8Q68G74 356 aa13.79□□□□□ -0.2
CCNB3-202ENST00000348603 PRR29P0C7W0 189 aa13.75□□□□□ -0.21
CCNB3-202ENST00000348603 CHADLQ6NUI6 762 aa13.74□□□□□ -0.21
CCNB3-202ENST00000348603 PABPN1Q86U42 306 aaKnown RBP eCLIP13.67□□□□□ -0.22
CCNB3-202ENST00000348603 CLCN6P51797 869 aa13.61□□□□□ -0.23
CCNB3-202ENST00000348603 CD44P16070 742 aaKnown RBP13.59□□□□□ -0.23
CCNB3-202ENST00000348603 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
CCNB3-202ENST00000348603 POTEIP0CG38 1075 aa13.47□□□□□ -0.25
CCNB3-202ENST00000348603 DCBLD2Q96PD2 775 aa13.45□□□□□ -0.26
CCNB3-202ENST00000348603 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
CCNB3-202ENST00000348603 ZRANB1Q9UGI0 708 aa13.33□□□□□ -0.28
CCNB3-202ENST00000348603 PLSCR2Q9NRY7 297 aa13.32□□□□□ -0.28
CCNB3-202ENST00000348603 STAG3Q9UJ98 1225 aa13.29□□□□□ -0.28
CCNB3-202ENST00000348603 PAK3O75914 559 aaPredicted RBP13.22□□□□□ -0.29
CCNB3-202ENST00000348603 CREBZFQ9NS37 354 aa13.21□□□□□ -0.29
CCNB3-202ENST00000348603 GALR2O43603 387 aaPredicted RBP13.17□□□□□ -0.3
CCNB3-202ENST00000348603 OTUD5Q96G74 571 aa13.1□□□□□ -0.31
CCNB3-202ENST00000348603 NPM1P06748 294 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCNB3-202ENST00000348603 PHF12Q96QT6 1004 aa13.05□□□□□ -0.32
CCNB3-202ENST00000348603 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
CCNB3-202ENST00000348603 POTEMA6NI47 508 aa13□□□□□ -0.33
CCNB3-202ENST00000348603 POTEB2H3BUK9 544 aa13□□□□□ -0.33
CCNB3-202ENST00000348603 CSRNP3Q8WYN3 585 aa12.97□□□□□ -0.33
CCNB3-202ENST00000348603 POTEGQ6S5H5 508 aa12.95□□□□□ -0.34
CCNB3-202ENST00000348603 ASTLQ6HA08 431 aaPredicted RBP12.91□□□□□ -0.34
CCNB3-202ENST00000348603 MAMSTRQ6ZN01 415 aa12.91□□□□□ -0.34
CCNB3-202ENST00000348603 PELP1Q8IZL8 1130 aaKnown RBP12.91□□□□□ -0.34
CCNB3-202ENST00000348603 SLC39A7Q92504 469 aa12.91□□□□□ -0.34
CCNB3-202ENST00000348603 PCDH10Q9P2E7 1040 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms