RNA–Protein interactions for RNA: ENST00000343846.7

SUSD4-202, Transcript of sushi domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SUSD4, Length 3,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD4-202ENST00000343846 NISCHQ9Y2I1 1504 aa31.48■■■□□ 2.63
SUSD4-202ENST00000343846 SHROOM4Q9ULL8 1493 aa28.94■■■□□ 2.22
SUSD4-202ENST00000343846 SUPT5HO00267 1087 aaKnown RBP28.82■■■□□ 2.2
SUSD4-202ENST00000343846 DCAF8L2P0C7V8 631 aa28.44■■■□□ 2.14
SUSD4-202ENST00000343846 PCGF6Q9BYE7 350 aa27.79■■■□□ 2.04
SUSD4-202ENST00000343846 PPARGC1BQ86YN6 1023 aaKnown RBP27.45■■□□□ 1.99
SUSD4-202ENST00000343846 EHMT2Q96KQ7 1210 aa27.37■■□□□ 1.97
SUSD4-202ENST00000343846 HRCP23327 699 aa27.33■■□□□ 1.97
SUSD4-202ENST00000343846 CHIC1Q5VXU3 224 aa27.27■■□□□ 1.96
SUSD4-202ENST00000343846 LOC105371045A0A1W2PR82 267 aa27.18■■□□□ 1.94
SUSD4-202ENST00000343846 FAM9AQ8IZU1 332 aaPredicted RBP26.94■■□□□ 1.9
SUSD4-202ENST00000343846 MYO15BQ96JP2 1530 aa26.88■■□□□ 1.89
SUSD4-202ENST00000343846 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
SUSD4-202ENST00000343846 TTBK1Q5TCY1 1321 aaPredicted RBP26.47■■□□□ 1.83
SUSD4-202ENST00000343846 TRIM26Q12899 539 aaPredicted RBP26.42■■□□□ 1.82
SUSD4-202ENST00000343846 TRIM41Q8WV44 630 aa26.35■■□□□ 1.81
SUSD4-202ENST00000343846 CCDC180Q9P1Z9 1646 aa26.16■■□□□ 1.78
SUSD4-202ENST00000343846 CCER1Q8TC90 406 aaPredicted RBP25.93■■□□□ 1.74
SUSD4-202ENST00000343846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.93■■□□□ 1.74
SUSD4-202ENST00000343846 ZEB1P37275 1124 aaPredicted RBP25.92■■□□□ 1.74
SUSD4-202ENST00000343846 DCAF1Q9Y4B6 1507 aa25.8■■□□□ 1.72
SUSD4-202ENST00000343846 SCAF1Q9H7N4 1312 aaKnown RBP25.73■■□□□ 1.71
SUSD4-202ENST00000343846 YTHDC1Q96MU7 727 aaKnown RBP25.67■■□□□ 1.7
SUSD4-202ENST00000343846 RANGAP1P46060 587 aaPredicted RBP25.57■■□□□ 1.68
SUSD4-202ENST00000343846 PELP1Q8IZL8 1130 aaKnown RBP25.49■■□□□ 1.67
SUSD4-202ENST00000343846 SCRIBQ14160 1630 aa25.41■■□□□ 1.66
SUSD4-202ENST00000343846 GTF3C3Q9Y5Q9 886 aa25.4■■□□□ 1.66
SUSD4-202ENST00000343846 DIEXFQ68CQ4 756 aaKnown RBP25.4■■□□□ 1.66
SUSD4-202ENST00000343846 NEUROD1Q13562 356 aa25.39■■□□□ 1.65
SUSD4-202ENST00000343846 UBTFP17480 764 aaKnown RBP25.38■■□□□ 1.65
SUSD4-202ENST00000343846 CENPBP07199 599 aaPredicted RBP25.36■■□□□ 1.65
SUSD4-202ENST00000343846 ACIN1Q9UKV3 1341 aaKnown RBP25.26■■□□□ 1.63
SUSD4-202ENST00000343846 HNRNPUL2Q1KMD3 747 aaKnown RBP25.24■■□□□ 1.63
SUSD4-202ENST00000343846 RSF1Q96T23 1441 aaPredicted RBP25.22■■□□□ 1.63
SUSD4-202ENST00000343846 ABCC9O60706 1549 aa25.21■■□□□ 1.63
SUSD4-202ENST00000343846 RB1CC1Q8TDY2 1594 aa25.03■■□□□ 1.6
SUSD4-202ENST00000343846 APLP2Q06481 763 aa24.97■■□□□ 1.59
SUSD4-202ENST00000343846 CECR2Q9BXF3 1484 aa24.96■■□□□ 1.59
SUSD4-202ENST00000343846 ZNF316A6NFI3 1004 aaPredicted RBP24.82■■□□□ 1.56
SUSD4-202ENST00000343846 MIER1Q8N108 512 aa24.75■■□□□ 1.55
SUSD4-202ENST00000343846 ITGAEP38570 1179 aa24.73■■□□□ 1.55
SUSD4-202ENST00000343846 MROH2BQ7Z745 1585 aa24.73■■□□□ 1.55
SUSD4-202ENST00000343846 PABPN1Q86U42 306 aaKnown RBP eCLIP24.69■■□□□ 1.54
SUSD4-202ENST00000343846 CSRNP3Q8WYN3 585 aa24.65■■□□□ 1.54
SUSD4-202ENST00000343846 WIZO95785 1651 aa24.61■■□□□ 1.53
SUSD4-202ENST00000343846 CEP162Q5TB80 1403 aa24.49■■□□□ 1.51
SUSD4-202ENST00000343846 SOGA1O94964 1423 aa24.48■■□□□ 1.51
SUSD4-202ENST00000343846 BCANQ96GW7 911 aa24.44■■□□□ 1.5
SUSD4-202ENST00000343846 ABCC8Q09428 1581 aa24.44■■□□□ 1.5
SUSD4-202ENST00000343846 ATP1B4Q9UN42 357 aaPredicted RBP24.42■■□□□ 1.5
SUSD4-202ENST00000343846 CCDC88BA6NC98 1476 aa24.41■■□□□ 1.5
SUSD4-202ENST00000343846 NACADO15069 1562 aa24.37■■□□□ 1.49
SUSD4-202ENST00000343846 RUSC2Q8N2Y8 1516 aa24.28■■□□□ 1.48
SUSD4-202ENST00000343846 MYT1Q01538 1121 aa24.23■■□□□ 1.47
SUSD4-202ENST00000343846 TNIKQ9UKE5 1360 aa24.15■■□□□ 1.46
SUSD4-202ENST00000343846 HIRIP3Q9BW71 556 aaPredicted RBP24.12■■□□□ 1.45
SUSD4-202ENST00000343846 BAZ1AQ9NRL2 1556 aaPredicted RBP24.09■■□□□ 1.45
SUSD4-202ENST00000343846 CLIP1P30622 1438 aa24.06■■□□□ 1.44
SUSD4-202ENST00000343846 KCNH8Q96L42 1107 aa23.98■■□□□ 1.43
SUSD4-202ENST00000343846 FAM50AQ14320 339 aaKnown RBP23.98■■□□□ 1.43
SUSD4-202ENST00000343846 DDX10Q13206 875 aaKnown RBP23.97■■□□□ 1.43
SUSD4-202ENST00000343846 P3H3Q8IVL6 736 aa23.96■■□□□ 1.43
SUSD4-202ENST00000343846 SUPT16HQ9Y5B9 1047 aaKnown RBP23.96■■□□□ 1.43
SUSD4-202ENST00000343846 GOLGA3Q08378 1498 aa23.95■■□□□ 1.42
SUSD4-202ENST00000343846 CNGB1Q14028 1251 aaPredicted RBP23.93■■□□□ 1.42
SUSD4-202ENST00000343846 WRNQ14191 1432 aaPredicted RBP eCLIP23.92■■□□□ 1.42
SUSD4-202ENST00000343846 FKBP8Q14318 412 aa23.92■■□□□ 1.42
SUSD4-202ENST00000343846 KANK4Q5T7N3 995 aaPredicted RBP23.92■■□□□ 1.42
SUSD4-202ENST00000343846 NEFLP07196 543 aa23.91■■□□□ 1.42
SUSD4-202ENST00000343846 SMARCA4P51532 1647 aa23.9■■□□□ 1.42
SUSD4-202ENST00000343846 TOP2AP11388 1531 aaKnown RBP23.9■■□□□ 1.42
SUSD4-202ENST00000343846 TRIM52Q96A61 297 aa23.9■■□□□ 1.42
SUSD4-202ENST00000343846 SMARCA2P51531 1590 aa23.89■■□□□ 1.41
SUSD4-202ENST00000343846 EIF4G1Q04637 1599 aaKnown RBP23.86■■□□□ 1.41
SUSD4-202ENST00000343846 SIN3AQ96ST3 1273 aa23.77■■□□□ 1.4
SUSD4-202ENST00000343846 EEA1Q15075 1411 aa23.73■■□□□ 1.39
SUSD4-202ENST00000343846 UNC13AQ9UPW8 1703 aa23.72■■□□□ 1.39
SUSD4-202ENST00000343846 IRX6P78412 446 aaPredicted RBP23.71■■□□□ 1.39
SUSD4-202ENST00000343846 CEP164Q9UPV0 1460 aa23.69■■□□□ 1.38
SUSD4-202ENST00000343846 RAPGEF2Q9Y4G8 1499 aa23.69■■□□□ 1.38
SUSD4-202ENST00000343846 TSHZ2Q9NRE2 1034 aa23.68■■□□□ 1.38
SUSD4-202ENST00000343846 VPS8Q8N3P4 1428 aa23.67■■□□□ 1.38
SUSD4-202ENST00000343846 ERICH6Q7L0X2 663 aa23.64■■□□□ 1.37
SUSD4-202ENST00000343846 DHX57Q6P158 1386 aaKnown RBP23.59■■□□□ 1.37
SUSD4-202ENST00000343846 ANP32CO43423 234 aa23.57■■□□□ 1.36
SUSD4-202ENST00000343846 POLR3GLQ9BT43 218 aa23.54■■□□□ 1.36
SUSD4-202ENST00000343846 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
SUSD4-202ENST00000343846 SENP3-EIF4A1A0A087X0R7 540 aa23.52■■□□□ 1.35
SUSD4-202ENST00000343846 ANP32EQ9BTT0 268 aa23.5■■□□□ 1.35
SUSD4-202ENST00000343846 ARID3CA6NKF2 412 aa23.49■■□□□ 1.35
SUSD4-202ENST00000343846 BICRAQ9NZM4 1560 aa23.49■■□□□ 1.35
SUSD4-202ENST00000343846 HNRNPUQ00839 825 aaKnown RBP eCLIP23.44■■□□□ 1.34
SUSD4-202ENST00000343846 BAZ1BQ9UIG0 1483 aaKnown RBP23.44■■□□□ 1.34
SUSD4-202ENST00000343846 CCNB3Q8WWL7 1395 aa23.4■■□□□ 1.34
SUSD4-202ENST00000343846 ATAD2BQ9ULI0 1458 aa23.39■■□□□ 1.33
SUSD4-202ENST00000343846 RAB3GAP2Q9H2M9 1393 aa23.36■■□□□ 1.33
SUSD4-202ENST00000343846 CLSPNQ9HAW4 1339 aa23.34■■□□□ 1.33
SUSD4-202ENST00000343846 CHIC2Q9UKJ5 165 aa23.33■■□□□ 1.33
SUSD4-202ENST00000343846 RBM19Q9Y4C8 960 aaKnown RBP23.33■■□□□ 1.33
SUSD4-202ENST00000343846 KIF21BO75037 1637 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms