RNA–Protein interactions for RNA: ENST00000343638.9

UBTF-202, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 4,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-202ENST00000343638 NISCHQ9Y2I1 1504 aa36.22■■■■□ 3.39
UBTF-202ENST00000343638 DCAF8L2P0C7V8 631 aa34.06■■■■□ 3.04
UBTF-202ENST00000343638 SHROOM4Q9ULL8 1493 aa32.61■■■□□ 2.81
UBTF-202ENST00000343638 SUPT5HO00267 1087 aaKnown RBP32.48■■■□□ 2.79
UBTF-202ENST00000343638 EHMT2Q96KQ7 1210 aa30.55■■■□□ 2.48
UBTF-202ENST00000343638 ABCC9O60706 1549 aa30.5■■■□□ 2.47
UBTF-202ENST00000343638 FAM9AQ8IZU1 332 aaPredicted RBP30.35■■■□□ 2.45
UBTF-202ENST00000343638 CCDC180Q9P1Z9 1646 aa30.29■■■□□ 2.44
UBTF-202ENST00000343638 TRIM41Q8WV44 630 aa30.26■■■□□ 2.43
UBTF-202ENST00000343638 ZCCHC6Q5VYS8 1495 aaKnown RBP30.16■■■□□ 2.42
UBTF-202ENST00000343638 CHIC1Q5VXU3 224 aa29.87■■■□□ 2.37
UBTF-202ENST00000343638 PABPN1Q86U42 306 aaKnown RBP eCLIP29.75■■■□□ 2.35
UBTF-202ENST00000343638 APLP2Q06481 763 aa29.69■■■□□ 2.34
UBTF-202ENST00000343638 PCGF6Q9BYE7 350 aa29.63■■■□□ 2.33
UBTF-202ENST00000343638 UBTFP17480 764 aaKnown RBP29.49■■■□□ 2.31
UBTF-202ENST00000343638 SCRIBQ14160 1630 aa29.43■■■□□ 2.3
UBTF-202ENST00000343638 RANGAP1P46060 587 aaPredicted RBP29.41■■■□□ 2.3
UBTF-202ENST00000343638 TTBK1Q5TCY1 1321 aaPredicted RBP29.4■■■□□ 2.3
UBTF-202ENST00000343638 LOC105371045A0A1W2PR82 267 aa29.36■■■□□ 2.29
UBTF-202ENST00000343638 DCAF1Q9Y4B6 1507 aa29.11■■■□□ 2.25
UBTF-202ENST00000343638 NACADO15069 1562 aa29.02■■■□□ 2.24
UBTF-202ENST00000343638 RB1CC1Q8TDY2 1594 aa29.01■■■□□ 2.23
UBTF-202ENST00000343638 PPARGC1BQ86YN6 1023 aaKnown RBP28.93■■■□□ 2.22
UBTF-202ENST00000343638 ATP1B4Q9UN42 357 aaPredicted RBP28.92■■■□□ 2.22
UBTF-202ENST00000343638 TRIM26Q12899 539 aaPredicted RBP28.88■■■□□ 2.21
UBTF-202ENST00000343638 ZEB1P37275 1124 aaPredicted RBP28.8■■■□□ 2.2
UBTF-202ENST00000343638 CCER1Q8TC90 406 aaPredicted RBP28.78■■■□□ 2.2
UBTF-202ENST00000343638 RSF1Q96T23 1441 aaPredicted RBP28.73■■■□□ 2.19
UBTF-202ENST00000343638 MYO15BQ96JP2 1530 aa28.43■■■□□ 2.14
UBTF-202ENST00000343638 CSRNP3Q8WYN3 585 aa28.41■■■□□ 2.14
UBTF-202ENST00000343638 HRCP23327 699 aa28.39■■■□□ 2.14
UBTF-202ENST00000343638 CECR2Q9BXF3 1484 aa28.37■■■□□ 2.13
UBTF-202ENST00000343638 BAZ1AQ9NRL2 1556 aaPredicted RBP28.25■■■□□ 2.11
UBTF-202ENST00000343638 HNRNPUL2Q1KMD3 747 aaKnown RBP28.2■■■□□ 2.11
UBTF-202ENST00000343638 ITGAEP38570 1179 aa28.17■■■□□ 2.1
UBTF-202ENST00000343638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.1■■■□□ 2.09
UBTF-202ENST00000343638 MROH2BQ7Z745 1585 aa28.05■■■□□ 2.08
UBTF-202ENST00000343638 BAZ1BQ9UIG0 1483 aaKnown RBP28.03■■■□□ 2.08
UBTF-202ENST00000343638 WRNQ14191 1432 aaPredicted RBP eCLIP27.81■■■□□ 2.04
UBTF-202ENST00000343638 P3H3Q8IVL6 736 aa27.76■■■□□ 2.03
UBTF-202ENST00000343638 FBLN2P98095 1184 aa27.74■■■□□ 2.03
UBTF-202ENST00000343638 FAM50AQ14320 339 aaKnown RBP27.74■■■□□ 2.03
UBTF-202ENST00000343638 CENPBP07199 599 aaPredicted RBP27.73■■■□□ 2.03
UBTF-202ENST00000343638 EEA1Q15075 1411 aa27.71■■■□□ 2.03
UBTF-202ENST00000343638 CCDC88BA6NC98 1476 aa27.68■■■□□ 2.02
UBTF-202ENST00000343638 WIZO95785 1651 aa27.64■■■□□ 2.02
UBTF-202ENST00000343638 SMARCA2P51531 1590 aa27.56■■■□□ 2
UBTF-202ENST00000343638 PELP1Q8IZL8 1130 aaKnown RBP27.52■■■□□ 2
UBTF-202ENST00000343638 TOP2AP11388 1531 aaKnown RBP27.51■■■□□ 2
UBTF-202ENST00000343638 GOLGA3Q08378 1498 aa27.48■■□□□ 1.99
UBTF-202ENST00000343638 CLIP1P30622 1438 aa27.47■■□□□ 1.99
UBTF-202ENST00000343638 SMARCA4P51532 1647 aa27.45■■□□□ 1.99
UBTF-202ENST00000343638 MYT1LQ9UL68 1186 aa27.45■■□□□ 1.98
UBTF-202ENST00000343638 CEP162Q5TB80 1403 aa27.42■■□□□ 1.98
UBTF-202ENST00000343638 YTHDC1Q96MU7 727 aaKnown RBP27.41■■□□□ 1.98
UBTF-202ENST00000343638 KIF27Q86VH2 1401 aa27.4■■□□□ 1.98
UBTF-202ENST00000343638 ATAD2BQ9ULI0 1458 aa27.4■■□□□ 1.98
UBTF-202ENST00000343638 TNIKQ9UKE5 1360 aa27.39■■□□□ 1.98
UBTF-202ENST00000343638 ARID3CA6NKF2 412 aa27.37■■□□□ 1.97
UBTF-202ENST00000343638 SOGA1O94964 1423 aa27.37■■□□□ 1.97
UBTF-202ENST00000343638 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
UBTF-202ENST00000343638 CEP164Q9UPV0 1460 aa27.34■■□□□ 1.97
UBTF-202ENST00000343638 TRIM52Q96A61 297 aa27.31■■□□□ 1.96
UBTF-202ENST00000343638 DIEXFQ68CQ4 756 aaKnown RBP27.25■■□□□ 1.95
UBTF-202ENST00000343638 NEUROD1Q13562 356 aa27.23■■□□□ 1.95
UBTF-202ENST00000343638 CDK11AQ9UQ88 783 aaPredicted RBP27.23■■□□□ 1.95
UBTF-202ENST00000343638 CHMP7Q8WUX9 453 aaPredicted RBP27.13■■□□□ 1.93
UBTF-202ENST00000343638 CUX2O14529 1486 aa27.08■■□□□ 1.93
UBTF-202ENST00000343638 CADPSQ9ULU8 1353 aa27.08■■□□□ 1.93
UBTF-202ENST00000343638 POLR3GLQ9BT43 218 aa27.07■■□□□ 1.92
UBTF-202ENST00000343638 ZNF777Q9ULD5 760 aaPredicted RBP27.02■■□□□ 1.92
UBTF-202ENST00000343638 CARMIL1Q5VZK9 1371 aa27.02■■□□□ 1.92
UBTF-202ENST00000343638 MTUS2Q5JR59 1369 aa26.99■■□□□ 1.91
UBTF-202ENST00000343638 ZNF316A6NFI3 1004 aaPredicted RBP26.99■■□□□ 1.91
UBTF-202ENST00000343638 PDS5BQ9NTI5 1447 aa26.94■■□□□ 1.9
UBTF-202ENST00000343638 ERCC6Q03468 1493 aa26.92■■□□□ 1.9
UBTF-202ENST00000343638 NEFLP07196 543 aa26.92■■□□□ 1.9
UBTF-202ENST00000343638 NCAPD3P42695 1498 aa26.9■■□□□ 1.9
UBTF-202ENST00000343638 EIF4G1Q04637 1599 aaKnown RBP26.83■■□□□ 1.89
UBTF-202ENST00000343638 CNGB1Q14028 1251 aaPredicted RBP26.79■■□□□ 1.88
UBTF-202ENST00000343638 CHIC2Q9UKJ5 165 aa26.79■■□□□ 1.88
UBTF-202ENST00000343638 RUSC2Q8N2Y8 1516 aa26.78■■□□□ 1.88
UBTF-202ENST00000343638 ZNF326Q5BKZ1 582 aaKnown RBP26.76■■□□□ 1.87
UBTF-202ENST00000343638 TDRD9Q8NDG6 1382 aaKnown RBP26.76■■□□□ 1.87
UBTF-202ENST00000343638 VPS8Q8N3P4 1428 aa26.75■■□□□ 1.87
UBTF-202ENST00000343638 FHAD1B1AJZ9 1412 aa26.7■■□□□ 1.86
UBTF-202ENST00000343638 BICRAQ9NZM4 1560 aa26.69■■□□□ 1.86
UBTF-202ENST00000343638 FANCD2Q9BXW9 1451 aa26.67■■□□□ 1.86
UBTF-202ENST00000343638 RAPGEF2Q9Y4G8 1499 aa26.65■■□□□ 1.86
UBTF-202ENST00000343638 TONSLQ96HA7 1378 aa26.63■■□□□ 1.85
UBTF-202ENST00000343638 NPM1P06748 294 aaKnown RBP eCLIP26.62■■□□□ 1.85
UBTF-202ENST00000343638 PLEKHD1A6NEE1 506 aa26.61■■□□□ 1.85
UBTF-202ENST00000343638 TSPY4P0CV99 314 aa26.6■■□□□ 1.85
UBTF-202ENST00000343638 TSPY10P0CW01 314 aa26.6■■□□□ 1.85
UBTF-202ENST00000343638 ANP32CO43423 234 aa26.57■■□□□ 1.84
UBTF-202ENST00000343638 RRP7BPQ9NSQ0 103 aa26.54■■□□□ 1.84
UBTF-202ENST00000343638 KANK4Q5T7N3 995 aaPredicted RBP26.54■■□□□ 1.84
UBTF-202ENST00000343638 CCNB3Q8WWL7 1395 aa26.51■■□□□ 1.83
UBTF-202ENST00000343638 CFTRP13569 1480 aa26.47■■□□□ 1.83
UBTF-202ENST00000343638 HMGXB3Q12766 1538 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms