RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 DCAF8L2P0C7V8 631 aa26.37■■□□□ 1.81
COL11A2-201ENST00000341947 SUPT5HO00267 1087 aaKnown RBP24.8■■□□□ 1.56
COL11A2-201ENST00000341947 EHMT2Q96KQ7 1210 aa24.24■■□□□ 1.47
COL11A2-201ENST00000341947 SHROOM4Q9ULL8 1493 aa24.24■■□□□ 1.47
COL11A2-201ENST00000341947 PELP1Q8IZL8 1130 aaKnown RBP24.2■■□□□ 1.46
COL11A2-201ENST00000341947 NISCHQ9Y2I1 1504 aa24.14■■□□□ 1.46
COL11A2-201ENST00000341947 APLP2Q06481 763 aa24.04■■□□□ 1.44
COL11A2-201ENST00000341947 FAM9AQ8IZU1 332 aaPredicted RBP23.88■■□□□ 1.41
COL11A2-201ENST00000341947 TTBK1Q5TCY1 1321 aaPredicted RBP23.44■■□□□ 1.34
COL11A2-201ENST00000341947 RANGAP1P46060 587 aaPredicted RBP23.25■■□□□ 1.31
COL11A2-201ENST00000341947 ERICH6Q7L0X2 663 aa23.21■■□□□ 1.31
COL11A2-201ENST00000341947 ATP1B4Q9UN42 357 aaPredicted RBP23.19■■□□□ 1.3
COL11A2-201ENST00000341947 PCGF6Q9BYE7 350 aa23.18■■□□□ 1.3
COL11A2-201ENST00000341947 CCER1Q8TC90 406 aaPredicted RBP23.13■■□□□ 1.29
COL11A2-201ENST00000341947 CENPBP07199 599 aaPredicted RBP23.04■■□□□ 1.28
COL11A2-201ENST00000341947 TRIM41Q8WV44 630 aa22.99■■□□□ 1.27
COL11A2-201ENST00000341947 ZEB1P37275 1124 aaPredicted RBP22.94■■□□□ 1.26
COL11A2-201ENST00000341947 UBTFP17480 764 aaKnown RBP22.88■■□□□ 1.25
COL11A2-201ENST00000341947 NEFLP07196 543 aa22.76■■□□□ 1.23
COL11A2-201ENST00000341947 YTHDC1Q96MU7 727 aaKnown RBP22.52■■□□□ 1.2
COL11A2-201ENST00000341947 MYT1LQ9UL68 1186 aa22.5■■□□□ 1.19
COL11A2-201ENST00000341947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.37■■□□□ 1.17
COL11A2-201ENST00000341947 HNRNPUL2Q1KMD3 747 aaKnown RBP22.37■■□□□ 1.17
COL11A2-201ENST00000341947 PPARGC1BQ86YN6 1023 aaKnown RBP22.31■■□□□ 1.16
COL11A2-201ENST00000341947 POLR3GLQ9BT43 218 aa22.28■■□□□ 1.16
COL11A2-201ENST00000341947 DAXXQ9UER7 740 aaPredicted RBP22.27■■□□□ 1.16
COL11A2-201ENST00000341947 ITGAEP38570 1179 aa22.21■■□□□ 1.15
COL11A2-201ENST00000341947 TRIM26Q12899 539 aaPredicted RBP22.09■■□□□ 1.13
COL11A2-201ENST00000341947 MYT1Q01538 1121 aa22.09■■□□□ 1.13
COL11A2-201ENST00000341947 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
COL11A2-201ENST00000341947 SLC4A1APQ9BWU0 796 aaKnown RBP22■■□□□ 1.11
COL11A2-201ENST00000341947 CNGB1Q14028 1251 aaPredicted RBP21.97■■□□□ 1.11
COL11A2-201ENST00000341947 HRCP23327 699 aa21.79■■□□□ 1.08
COL11A2-201ENST00000341947 CLSPNQ9HAW4 1339 aa21.74■■□□□ 1.07
COL11A2-201ENST00000341947 ZNF316A6NFI3 1004 aaPredicted RBP21.71■■□□□ 1.07
COL11A2-201ENST00000341947 LOC105371045A0A1W2PR82 267 aa21.67■■□□□ 1.06
COL11A2-201ENST00000341947 FAM50AQ14320 339 aaKnown RBP21.64■■□□□ 1.06
COL11A2-201ENST00000341947 TRIM52Q96A61 297 aa21.62■■□□□ 1.05
COL11A2-201ENST00000341947 RTL5Q5HYW3 569 aaPredicted RBP21.58■■□□□ 1.04
COL11A2-201ENST00000341947 ZBTB47Q9UFB7 747 aaPredicted RBP21.44■■□□□ 1.02
COL11A2-201ENST00000341947 NEUROD1Q13562 356 aa21.42■■□□□ 1.02
COL11A2-201ENST00000341947 DIEXFQ68CQ4 756 aaKnown RBP21.41■■□□□ 1.02
COL11A2-201ENST00000341947 ZNF326Q5BKZ1 582 aaKnown RBP21.38■■□□□ 1.01
COL11A2-201ENST00000341947 PABPN1Q86U42 306 aaKnown RBP eCLIP21.35■■□□□ 1.01
COL11A2-201ENST00000341947 FBLN2P98095 1184 aa21.34■■□□□ 1.01
COL11A2-201ENST00000341947 SLC24A1O60721 1099 aa21.31■■□□□ 1
COL11A2-201ENST00000341947 BCANQ96GW7 911 aa21.27■■□□□ 1
COL11A2-201ENST00000341947 ANP32CO43423 234 aa21.26■□□□□ 0.99
COL11A2-201ENST00000341947 NEFMP07197 916 aa21.23■□□□□ 0.99
COL11A2-201ENST00000341947 ABCC9O60706 1549 aa21.23■□□□□ 0.99
COL11A2-201ENST00000341947 CANXP27824 592 aaKnown RBP21.23■□□□□ 0.99
COL11A2-201ENST00000341947 BCL11AQ9H165 835 aa21.13■□□□□ 0.97
COL11A2-201ENST00000341947 CDK11AQ9UQ88 783 aaPredicted RBP21.12■□□□□ 0.97
COL11A2-201ENST00000341947 ARID3CA6NKF2 412 aa21.02■□□□□ 0.96
COL11A2-201ENST00000341947 ESF1Q9H501 851 aaKnown RBP21■□□□□ 0.95
COL11A2-201ENST00000341947 ZNF777Q9ULD5 760 aaPredicted RBP20.98■□□□□ 0.95
COL11A2-201ENST00000341947 P3H3Q8IVL6 736 aa20.98■□□□□ 0.95
COL11A2-201ENST00000341947 GTF3C3Q9Y5Q9 886 aa20.88■□□□□ 0.93
COL11A2-201ENST00000341947 STAG3Q9UJ98 1225 aa20.86■□□□□ 0.93
COL11A2-201ENST00000341947 ANP32AP39687 249 aaKnown RBP20.82■□□□□ 0.92
COL11A2-201ENST00000341947 CHGAP10645 457 aaKnown RBP20.81■□□□□ 0.92
COL11A2-201ENST00000341947 PLPPR3Q6T4P5 718 aa20.76■□□□□ 0.91
COL11A2-201ENST00000341947 CSRNP3Q8WYN3 585 aa20.75■□□□□ 0.91
COL11A2-201ENST00000341947 NPM1P06748 294 aaKnown RBP eCLIP20.74■□□□□ 0.91
COL11A2-201ENST00000341947 NPM2Q86SE8 214 aaKnown RBP20.72■□□□□ 0.91
COL11A2-201ENST00000341947 HSP90AA1P07900 732 aaKnown RBP20.68■□□□□ 0.9
COL11A2-201ENST00000341947 ANP32BQ92688 251 aaKnown RBP20.68■□□□□ 0.9
COL11A2-201ENST00000341947 TONSLQ96HA7 1378 aa20.66■□□□□ 0.9
COL11A2-201ENST00000341947 UPF2Q9HAU5 1272 aaKnown RBP20.62■□□□□ 0.89
COL11A2-201ENST00000341947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.53■□□□□ 0.88
COL11A2-201ENST00000341947 FAM9BQ8IZU0 186 aa20.49■□□□□ 0.87
COL11A2-201ENST00000341947 HNRNPUQ00839 825 aaKnown RBP eCLIP20.49■□□□□ 0.87
COL11A2-201ENST00000341947 ACIN1Q9UKV3 1341 aaKnown RBP20.49■□□□□ 0.87
COL11A2-201ENST00000341947 SCAF1Q9H7N4 1312 aaKnown RBP20.48■□□□□ 0.87
COL11A2-201ENST00000341947 FKBP8Q14318 412 aa20.47■□□□□ 0.87
COL11A2-201ENST00000341947 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.47■□□□□ 0.87
COL11A2-201ENST00000341947 WDR43Q15061 677 aaKnown RBP eCLIP20.45■□□□□ 0.86
COL11A2-201ENST00000341947 SALL2Q9Y467 1007 aaPredicted RBP20.45■□□□□ 0.86
COL11A2-201ENST00000341947 CHIC2Q9UKJ5 165 aa20.43■□□□□ 0.86
COL11A2-201ENST00000341947 TMC1Q8TDI8 760 aa20.42■□□□□ 0.86
COL11A2-201ENST00000341947 TSPY4P0CV99 314 aa20.4■□□□□ 0.86
COL11A2-201ENST00000341947 TSPY10P0CW01 314 aa20.4■□□□□ 0.86
COL11A2-201ENST00000341947 SCRIBQ14160 1630 aa20.4■□□□□ 0.86
COL11A2-201ENST00000341947 DDX10Q13206 875 aaKnown RBP20.39■□□□□ 0.85
COL11A2-201ENST00000341947 A0A0G2JS52 829 aa20.38■□□□□ 0.85
COL11A2-201ENST00000341947 KDM2AQ9Y2K7 1162 aa20.34■□□□□ 0.85
COL11A2-201ENST00000341947 MYH16Q9H6N6 1097 aa20.34■□□□□ 0.85
COL11A2-201ENST00000341947 CCDC136Q96JN2 1154 aa20.33■□□□□ 0.84
COL11A2-201ENST00000341947 ZBTB7CA1YPR0 619 aa20.31■□□□□ 0.84
COL11A2-201ENST00000341947 EIF5BO60841 1220 aaKnown RBP20.3■□□□□ 0.84
COL11A2-201ENST00000341947 CHMP7Q8WUX9 453 aaPredicted RBP20.29■□□□□ 0.84
COL11A2-201ENST00000341947 CDK11BP21127 795 aaKnown RBP20.28■□□□□ 0.84
COL11A2-201ENST00000341947 MTUS2Q5JR59 1369 aa20.27■□□□□ 0.84
COL11A2-201ENST00000341947 PPP1R15AO75807 674 aaPredicted RBP20.26■□□□□ 0.83
COL11A2-201ENST00000341947 C14orf37Q86TY3 774 aa20.26■□□□□ 0.83
COL11A2-201ENST00000341947 MRS2Q9HD23 443 aa20.25■□□□□ 0.83
COL11A2-201ENST00000341947 PLEKHG5O94827 1062 aa20.21■□□□□ 0.83
COL11A2-201ENST00000341947 ARXQ96QS3 562 aa20.16■□□□□ 0.82
COL11A2-201ENST00000341947 SENP3Q9H4L4 574 aaPredicted RBP20.15■□□□□ 0.82
COL11A2-201ENST00000341947 HAP1P54257 671 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms