RNA–Protein interactions for RNA: ENST00000341418.9

SKOR1-201, Transcript of SKI family transcriptional corepressor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SKOR1, Length 3,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1-201ENST00000341418 NISCHQ9Y2I1 1504 aa33.88■■■■□ 3.01
SKOR1-201ENST00000341418 CCDC180Q9P1Z9 1646 aa29.12■■■□□ 2.25
SKOR1-201ENST00000341418 DCAF8L2P0C7V8 631 aa28.53■■■□□ 2.16
SKOR1-201ENST00000341418 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
SKOR1-201ENST00000341418 ZCCHC6Q5VYS8 1495 aaKnown RBP28.5■■■□□ 2.15
SKOR1-201ENST00000341418 ABCC9O60706 1549 aa27.76■■■□□ 2.03
SKOR1-201ENST00000341418 DCAF1Q9Y4B6 1507 aa27.72■■■□□ 2.03
SKOR1-201ENST00000341418 SUPT5HO00267 1087 aaKnown RBP27.62■■■□□ 2.01
SKOR1-201ENST00000341418 SCRIBQ14160 1630 aa27.29■■□□□ 1.96
SKOR1-201ENST00000341418 MYO15BQ96JP2 1530 aa27.17■■□□□ 1.94
SKOR1-201ENST00000341418 NACADO15069 1562 aa27.11■■□□□ 1.93
SKOR1-201ENST00000341418 RB1CC1Q8TDY2 1594 aa26.87■■□□□ 1.89
SKOR1-201ENST00000341418 PELP1Q8IZL8 1130 aaKnown RBP26.8■■□□□ 1.88
SKOR1-201ENST00000341418 RSF1Q96T23 1441 aaPredicted RBP26.54■■□□□ 1.84
SKOR1-201ENST00000341418 CECR2Q9BXF3 1484 aa26.53■■□□□ 1.84
SKOR1-201ENST00000341418 UNC13AQ9UPW8 1703 aa26.44■■□□□ 1.82
SKOR1-201ENST00000341418 PABPN1Q86U42 306 aaKnown RBP eCLIP26.42■■□□□ 1.82
SKOR1-201ENST00000341418 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
SKOR1-201ENST00000341418 MROH2BQ7Z745 1585 aa26.34■■□□□ 1.81
SKOR1-201ENST00000341418 WIZO95785 1651 aa26.17■■□□□ 1.78
SKOR1-201ENST00000341418 MYT1Q01538 1121 aa26.16■■□□□ 1.78
SKOR1-201ENST00000341418 BICRAQ9NZM4 1560 aa26.13■■□□□ 1.77
SKOR1-201ENST00000341418 BAZ1AQ9NRL2 1556 aaPredicted RBP26.08■■□□□ 1.77
SKOR1-201ENST00000341418 SMARCA4P51532 1647 aa25.97■■□□□ 1.75
SKOR1-201ENST00000341418 TRIM41Q8WV44 630 aa25.73■■□□□ 1.71
SKOR1-201ENST00000341418 TOP2AP11388 1531 aaKnown RBP25.71■■□□□ 1.71
SKOR1-201ENST00000341418 HRCP23327 699 aa25.65■■□□□ 1.7
SKOR1-201ENST00000341418 LOC105371045A0A1W2PR82 267 aa25.64■■□□□ 1.69
SKOR1-201ENST00000341418 CCDC88BA6NC98 1476 aa25.6■■□□□ 1.69
SKOR1-201ENST00000341418 FAM9AQ8IZU1 332 aaPredicted RBP25.59■■□□□ 1.69
SKOR1-201ENST00000341418 SMARCA2P51531 1590 aa25.55■■□□□ 1.68
SKOR1-201ENST00000341418 ATAD2BQ9ULI0 1458 aa25.49■■□□□ 1.67
SKOR1-201ENST00000341418 EHMT2Q96KQ7 1210 aa25.47■■□□□ 1.67
SKOR1-201ENST00000341418 PEG3Q9GZU2 1588 aa25.42■■□□□ 1.66
SKOR1-201ENST00000341418 BAZ1BQ9UIG0 1483 aaKnown RBP25.42■■□□□ 1.66
SKOR1-201ENST00000341418 EIF4G1Q04637 1599 aaKnown RBP25.4■■□□□ 1.66
SKOR1-201ENST00000341418 ABCC8Q09428 1581 aa25.36■■□□□ 1.65
SKOR1-201ENST00000341418 PPARGC1BQ86YN6 1023 aaKnown RBP25.3■■□□□ 1.64
SKOR1-201ENST00000341418 NCAPD3P42695 1498 aa25.08■■□□□ 1.61
SKOR1-201ENST00000341418 SCAF1Q9H7N4 1312 aaKnown RBP25.08■■□□□ 1.61
SKOR1-201ENST00000341418 HMGXB3Q12766 1538 aa25.02■■□□□ 1.6
SKOR1-201ENST00000341418 WRNQ14191 1432 aaPredicted RBP eCLIP24.99■■□□□ 1.59
SKOR1-201ENST00000341418 SOGA1O94964 1423 aa24.95■■□□□ 1.58
SKOR1-201ENST00000341418 CC2D2AQ9P2K1 1620 aa24.93■■□□□ 1.58
SKOR1-201ENST00000341418 SYNJ1O43426 1573 aa24.88■■□□□ 1.57
SKOR1-201ENST00000341418 PCGF6Q9BYE7 350 aa24.88■■□□□ 1.57
SKOR1-201ENST00000341418 RUSC2Q8N2Y8 1516 aa24.88■■□□□ 1.57
SKOR1-201ENST00000341418 TTBK1Q5TCY1 1321 aaPredicted RBP24.82■■□□□ 1.56
SKOR1-201ENST00000341418 CSRNP3Q8WYN3 585 aa24.73■■□□□ 1.55
SKOR1-201ENST00000341418 CFTRP13569 1480 aa24.69■■□□□ 1.54
SKOR1-201ENST00000341418 UBTFP17480 764 aaKnown RBP24.66■■□□□ 1.54
SKOR1-201ENST00000341418 EEA1Q15075 1411 aa24.61■■□□□ 1.53
SKOR1-201ENST00000341418 TOP2BQ02880 1626 aa24.6■■□□□ 1.53
SKOR1-201ENST00000341418 CADPSQ9ULU8 1353 aa24.59■■□□□ 1.53
SKOR1-201ENST00000341418 DNAJC5BQ9UF47 199 aa24.58■■□□□ 1.53
SKOR1-201ENST00000341418 CUX1P39880 1505 aa24.56■■□□□ 1.52
SKOR1-201ENST00000341418 PRKCSHP14314 528 aaPredicted RBP24.51■■□□□ 1.51
SKOR1-201ENST00000341418 BIVM-ERCC5R4GMW8 1640 aa24.51■■□□□ 1.51
SKOR1-201ENST00000341418 TRIM26Q12899 539 aaPredicted RBP24.49■■□□□ 1.51
SKOR1-201ENST00000341418 NESP48681 1621 aa24.49■■□□□ 1.51
SKOR1-201ENST00000341418 RANGAP1P46060 587 aaPredicted RBP24.48■■□□□ 1.51
SKOR1-201ENST00000341418 CEP162Q5TB80 1403 aa24.47■■□□□ 1.51
SKOR1-201ENST00000341418 GOLGA3Q08378 1498 aa24.47■■□□□ 1.51
SKOR1-201ENST00000341418 BCL11AQ9H165 835 aa24.44■■□□□ 1.5
SKOR1-201ENST00000341418 TNIKQ9UKE5 1360 aa24.43■■□□□ 1.5
SKOR1-201ENST00000341418 PRDM2Q13029 1718 aa24.43■■□□□ 1.5
SKOR1-201ENST00000341418 CEP164Q9UPV0 1460 aa24.4■■□□□ 1.5
SKOR1-201ENST00000341418 FANCD2Q9BXW9 1451 aa24.38■■□□□ 1.49
SKOR1-201ENST00000341418 RAPGEF2Q9Y4G8 1499 aa24.37■■□□□ 1.49
SKOR1-201ENST00000341418 KIF21BO75037 1637 aa24.32■■□□□ 1.48
SKOR1-201ENST00000341418 KIF27Q86VH2 1401 aa24.27■■□□□ 1.48
SKOR1-201ENST00000341418 FGD5Q6ZNL6 1462 aa24.27■■□□□ 1.48
SKOR1-201ENST00000341418 CUX2O14529 1486 aa24.25■■□□□ 1.47
SKOR1-201ENST00000341418 CLIP1P30622 1438 aa24.19■■□□□ 1.46
SKOR1-201ENST00000341418 LAMC3Q9Y6N6 1575 aa24.15■■□□□ 1.46
SKOR1-201ENST00000341418 PRXQ9BXM0 1461 aa24.15■■□□□ 1.46
SKOR1-201ENST00000341418 RAD54L2Q9Y4B4 1467 aa24.14■■□□□ 1.46
SKOR1-201ENST00000341418 TOPBP1Q92547 1522 aa24.13■■□□□ 1.45
SKOR1-201ENST00000341418 DNMBPQ6XZF7 1577 aa24.1■■□□□ 1.45
SKOR1-201ENST00000341418 GTF3C3Q9Y5Q9 886 aa24.09■■□□□ 1.45
SKOR1-201ENST00000341418 POLA1P09884 1462 aaPredicted RBP24.07■■□□□ 1.44
SKOR1-201ENST00000341418 CENPBP07199 599 aaPredicted RBP24.06■■□□□ 1.44
SKOR1-201ENST00000341418 IGF1RP08069 1367 aa24.06■■□□□ 1.44
SKOR1-201ENST00000341418 PDS5BQ9NTI5 1447 aa24.06■■□□□ 1.44
SKOR1-201ENST00000341418 URB2Q14146 1524 aaKnown RBP24.06■■□□□ 1.44
SKOR1-201ENST00000341418 ACIN1Q9UKV3 1341 aaKnown RBP24.05■■□□□ 1.44
SKOR1-201ENST00000341418 ERICH3Q5RHP9 1530 aa24.05■■□□□ 1.44
SKOR1-201ENST00000341418 KIF21AQ7Z4S6 1674 aa24.03■■□□□ 1.44
SKOR1-201ENST00000341418 CARMIL1Q5VZK9 1371 aa23.98■■□□□ 1.43
SKOR1-201ENST00000341418 NEUROD1Q13562 356 aa23.97■■□□□ 1.43
SKOR1-201ENST00000341418 VPS8Q8N3P4 1428 aa23.94■■□□□ 1.42
SKOR1-201ENST00000341418 TDRD9Q8NDG6 1382 aaKnown RBP23.93■■□□□ 1.42
SKOR1-201ENST00000341418 ERICH6Q7L0X2 663 aa23.92■■□□□ 1.42
SKOR1-201ENST00000341418 APLP2Q06481 763 aa23.92■■□□□ 1.42
SKOR1-201ENST00000341418 ABCA10Q8WWZ4 1543 aa23.91■■□□□ 1.42
SKOR1-201ENST00000341418 ARAP1Q96P48 1450 aa23.85■■□□□ 1.41
SKOR1-201ENST00000341418 P3H3Q8IVL6 736 aa23.81■■□□□ 1.4
SKOR1-201ENST00000341418 ARHGAP35Q9NRY4 1499 aa23.78■■□□□ 1.4
SKOR1-201ENST00000341418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.78■■□□□ 1.4
SKOR1-201ENST00000341418 WDR97A6NE52 1622 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms