RNA–Protein interactions for RNA: ENST00000340067.3

KCTD21-201, Transcript of potassium channel tetramerization domain containing 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD21, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD21-201ENST00000340067 NISCHQ9Y2I1 1504 aa22.38■■□□□ 1.17
KCTD21-201ENST00000340067 DCAF8L2P0C7V8 631 aa20.11■□□□□ 0.81
KCTD21-201ENST00000340067 SHROOM4Q9ULL8 1493 aa19.79■□□□□ 0.76
KCTD21-201ENST00000340067 SUPT5HO00267 1087 aaKnown RBP19.29■□□□□ 0.68
KCTD21-201ENST00000340067 ABCC9O60706 1549 aa18.81■□□□□ 0.6
KCTD21-201ENST00000340067 CCDC180Q9P1Z9 1646 aa18.8■□□□□ 0.6
KCTD21-201ENST00000340067 ZCCHC6Q5VYS8 1495 aaKnown RBP18.71■□□□□ 0.59
KCTD21-201ENST00000340067 SCRIBQ14160 1630 aa18.25■□□□□ 0.51
KCTD21-201ENST00000340067 EHMT2Q96KQ7 1210 aa18.23■□□□□ 0.51
KCTD21-201ENST00000340067 PABPN1Q86U42 306 aaKnown RBP eCLIP18.2■□□□□ 0.5
KCTD21-201ENST00000340067 FAM9AQ8IZU1 332 aaPredicted RBP18.02■□□□□ 0.47
KCTD21-201ENST00000340067 CHIC1Q5VXU3 224 aa18■□□□□ 0.47
KCTD21-201ENST00000340067 DCAF1Q9Y4B6 1507 aa17.92■□□□□ 0.46
KCTD21-201ENST00000340067 LOC105371045A0A1W2PR82 267 aa17.8■□□□□ 0.44
KCTD21-201ENST00000340067 CECR2Q9BXF3 1484 aa17.77■□□□□ 0.44
KCTD21-201ENST00000340067 TRIM41Q8WV44 630 aa17.77■□□□□ 0.43
KCTD21-201ENST00000340067 NACADO15069 1562 aa17.75■□□□□ 0.43
KCTD21-201ENST00000340067 RB1CC1Q8TDY2 1594 aa17.7■□□□□ 0.42
KCTD21-201ENST00000340067 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
KCTD21-201ENST00000340067 MYO15BQ96JP2 1530 aa17.59■□□□□ 0.41
KCTD21-201ENST00000340067 MROH2BQ7Z745 1585 aa17.52■□□□□ 0.4
KCTD21-201ENST00000340067 TTBK1Q5TCY1 1321 aaPredicted RBP17.44■□□□□ 0.38
KCTD21-201ENST00000340067 PCGF6Q9BYE7 350 aa17.43■□□□□ 0.38
KCTD21-201ENST00000340067 PPARGC1BQ86YN6 1023 aaKnown RBP17.42■□□□□ 0.38
KCTD21-201ENST00000340067 RANGAP1P46060 587 aaPredicted RBP17.41■□□□□ 0.38
KCTD21-201ENST00000340067 WIZO95785 1651 aa17.38■□□□□ 0.37
KCTD21-201ENST00000340067 BAZ1AQ9NRL2 1556 aaPredicted RBP17.22■□□□□ 0.35
KCTD21-201ENST00000340067 UBTFP17480 764 aaKnown RBP17.18■□□□□ 0.34
KCTD21-201ENST00000340067 UNC13AQ9UPW8 1703 aa17.13■□□□□ 0.33
KCTD21-201ENST00000340067 CCDC88BA6NC98 1476 aa17.09■□□□□ 0.33
KCTD21-201ENST00000340067 SMARCA4P51532 1647 aa17.08■□□□□ 0.32
KCTD21-201ENST00000340067 BICRAQ9NZM4 1560 aa17.08■□□□□ 0.32
KCTD21-201ENST00000340067 ABCC8Q09428 1581 aa17.04■□□□□ 0.32
KCTD21-201ENST00000340067 BAZ1BQ9UIG0 1483 aaKnown RBP17■□□□□ 0.31
KCTD21-201ENST00000340067 TOP2AP11388 1531 aaKnown RBP16.92■□□□□ 0.3
KCTD21-201ENST00000340067 ATAD2BQ9ULI0 1458 aa16.92■□□□□ 0.3
KCTD21-201ENST00000340067 SOGA1O94964 1423 aa16.87■□□□□ 0.29
KCTD21-201ENST00000340067 CSRNP3Q8WYN3 585 aa16.86■□□□□ 0.29
KCTD21-201ENST00000340067 SMARCA2P51531 1590 aa16.84■□□□□ 0.29
KCTD21-201ENST00000340067 TRIM26Q12899 539 aaPredicted RBP16.81■□□□□ 0.28
KCTD21-201ENST00000340067 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
KCTD21-201ENST00000340067 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
KCTD21-201ENST00000340067 RUSC2Q8N2Y8 1516 aa16.78■□□□□ 0.28
KCTD21-201ENST00000340067 ATP1B4Q9UN42 357 aaPredicted RBP16.77■□□□□ 0.27
KCTD21-201ENST00000340067 EIF4G1Q04637 1599 aaKnown RBP16.74■□□□□ 0.27
KCTD21-201ENST00000340067 APLP2Q06481 763 aa16.72■□□□□ 0.27
KCTD21-201ENST00000340067 HRCP23327 699 aa16.66■□□□□ 0.26
KCTD21-201ENST00000340067 P3H3Q8IVL6 736 aa16.62■□□□□ 0.25
KCTD21-201ENST00000340067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.61■□□□□ 0.25
KCTD21-201ENST00000340067 HNRNPUL2Q1KMD3 747 aaKnown RBP16.59■□□□□ 0.25
KCTD21-201ENST00000340067 CCER1Q8TC90 406 aaPredicted RBP16.55■□□□□ 0.24
KCTD21-201ENST00000340067 ITGAEP38570 1179 aa16.53■□□□□ 0.24
KCTD21-201ENST00000340067 NCAPD3P42695 1498 aa16.53■□□□□ 0.24
KCTD21-201ENST00000340067 CEP162Q5TB80 1403 aa16.52■□□□□ 0.24
KCTD21-201ENST00000340067 CC2D2AQ9P2K1 1620 aa16.5■□□□□ 0.23
KCTD21-201ENST00000340067 SYNJ1O43426 1573 aa16.49■□□□□ 0.23
KCTD21-201ENST00000340067 NESP48681 1621 aa16.47■□□□□ 0.23
KCTD21-201ENST00000340067 CADPSQ9ULU8 1353 aa16.45■□□□□ 0.22
KCTD21-201ENST00000340067 PEG3Q9GZU2 1588 aa16.43■□□□□ 0.22
KCTD21-201ENST00000340067 ARID3CA6NKF2 412 aa16.43■□□□□ 0.22
KCTD21-201ENST00000340067 GOLGA3Q08378 1498 aa16.4■□□□□ 0.22
KCTD21-201ENST00000340067 RAPGEF2Q9Y4G8 1499 aa16.39■□□□□ 0.21
KCTD21-201ENST00000340067 CLIP1P30622 1438 aa16.39■□□□□ 0.21
KCTD21-201ENST00000340067 FBLN2P98095 1184 aa16.38■□□□□ 0.21
KCTD21-201ENST00000340067 TNIKQ9UKE5 1360 aa16.38■□□□□ 0.21
KCTD21-201ENST00000340067 CUX2O14529 1486 aa16.37■□□□□ 0.21
KCTD21-201ENST00000340067 EEA1Q15075 1411 aa16.34■□□□□ 0.21
KCTD21-201ENST00000340067 KIF27Q86VH2 1401 aa16.33■□□□□ 0.2
KCTD21-201ENST00000340067 CEP164Q9UPV0 1460 aa16.32■□□□□ 0.2
KCTD21-201ENST00000340067 HMGXB3Q12766 1538 aa16.32■□□□□ 0.2
KCTD21-201ENST00000340067 CFTRP13569 1480 aa16.32■□□□□ 0.2
KCTD21-201ENST00000340067 TDRD9Q8NDG6 1382 aaKnown RBP16.32■□□□□ 0.2
KCTD21-201ENST00000340067 FANCD2Q9BXW9 1451 aa16.3■□□□□ 0.2
KCTD21-201ENST00000340067 CUX1P39880 1505 aa16.29■□□□□ 0.2
KCTD21-201ENST00000340067 RAD54L2Q9Y4B4 1467 aa16.28■□□□□ 0.2
KCTD21-201ENST00000340067 FGD5Q6ZNL6 1462 aa16.23■□□□□ 0.19
KCTD21-201ENST00000340067 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.19
KCTD21-201ENST00000340067 KANK4Q5T7N3 995 aaPredicted RBP16.2■□□□□ 0.18
KCTD21-201ENST00000340067 FAM50AQ14320 339 aaKnown RBP16.2■□□□□ 0.18
KCTD21-201ENST00000340067 TOP2BQ02880 1626 aa16.17■□□□□ 0.18
KCTD21-201ENST00000340067 IGF1RP08069 1367 aa16.15■□□□□ 0.18
KCTD21-201ENST00000340067 ZEB1P37275 1124 aaPredicted RBP16.14■□□□□ 0.17
KCTD21-201ENST00000340067 PDS5BQ9NTI5 1447 aa16.11■□□□□ 0.17
KCTD21-201ENST00000340067 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
KCTD21-201ENST00000340067 VPS8Q8N3P4 1428 aa16.06■□□□□ 0.16
KCTD21-201ENST00000340067 POLA1P09884 1462 aaPredicted RBP16.04■□□□□ 0.16
KCTD21-201ENST00000340067 TOPBP1Q92547 1522 aa16.03■□□□□ 0.16
KCTD21-201ENST00000340067 AQRO60306 1485 aaKnown RBP eCLIP16.02■□□□□ 0.15
KCTD21-201ENST00000340067 CHMP7Q8WUX9 453 aaPredicted RBP16.01■□□□□ 0.15
KCTD21-201ENST00000340067 PRXQ9BXM0 1461 aa16■□□□□ 0.15
KCTD21-201ENST00000340067 FHOD3Q2V2M9 1422 aa16■□□□□ 0.15
KCTD21-201ENST00000340067 ARAP1Q96P48 1450 aa15.98■□□□□ 0.15
KCTD21-201ENST00000340067 KIF21BO75037 1637 aa15.97■□□□□ 0.15
KCTD21-201ENST00000340067 URB2Q14146 1524 aaKnown RBP15.96■□□□□ 0.15
KCTD21-201ENST00000340067 BIVM-ERCC5R4GMW8 1640 aa15.96■□□□□ 0.14
KCTD21-201ENST00000340067 NEUROD1Q13562 356 aa15.93■□□□□ 0.14
KCTD21-201ENST00000340067 CHIC2Q9UKJ5 165 aa15.91■□□□□ 0.14
KCTD21-201ENST00000340067 GAPVD1Q14C86 1478 aa15.9■□□□□ 0.14
KCTD21-201ENST00000340067 ARHGAP35Q9NRY4 1499 aa15.89■□□□□ 0.13
KCTD21-201ENST00000340067 DNMBPQ6XZF7 1577 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms