RNA–Protein interactions for RNA: ENST00000339773.9

SEMA4F-201, Transcript of ssemaphorin 4F, humanhuman

TSL 1 (best) BASIC

Gene SEMA4F, Length 2,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4F-201ENST00000339773 NISCHQ9Y2I1 1504 aa34.44■■■■□ 3.1
SEMA4F-201ENST00000339773 CCDC180Q9P1Z9 1646 aa29.75■■■□□ 2.35
SEMA4F-201ENST00000339773 ZCCHC6Q5VYS8 1495 aaKnown RBP28.97■■■□□ 2.23
SEMA4F-201ENST00000339773 DCAF8L2P0C7V8 631 aa28.75■■■□□ 2.19
SEMA4F-201ENST00000339773 SHROOM4Q9ULL8 1493 aa28.73■■■□□ 2.19
SEMA4F-201ENST00000339773 DCAF1Q9Y4B6 1507 aa28.31■■■□□ 2.12
SEMA4F-201ENST00000339773 ABCC9O60706 1549 aa28.18■■■□□ 2.1
SEMA4F-201ENST00000339773 MYO15BQ96JP2 1530 aa27.81■■■□□ 2.04
SEMA4F-201ENST00000339773 SUPT5HO00267 1087 aaKnown RBP27.75■■■□□ 2.03
SEMA4F-201ENST00000339773 NACADO15069 1562 aa27.67■■■□□ 2.02
SEMA4F-201ENST00000339773 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
SEMA4F-201ENST00000339773 RB1CC1Q8TDY2 1594 aa27.41■■□□□ 1.98
SEMA4F-201ENST00000339773 UNC13AQ9UPW8 1703 aa26.93■■□□□ 1.9
SEMA4F-201ENST00000339773 CECR2Q9BXF3 1484 aa26.9■■□□□ 1.9
SEMA4F-201ENST00000339773 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
SEMA4F-201ENST00000339773 CHIC1Q5VXU3 224 aa26.84■■□□□ 1.89
SEMA4F-201ENST00000339773 PABPN1Q86U42 306 aaKnown RBP eCLIP26.78■■□□□ 1.88
SEMA4F-201ENST00000339773 MROH2BQ7Z745 1585 aa26.71■■□□□ 1.87
SEMA4F-201ENST00000339773 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
SEMA4F-201ENST00000339773 BAZ1AQ9NRL2 1556 aaPredicted RBP26.54■■□□□ 1.84
SEMA4F-201ENST00000339773 WIZO95785 1651 aa26.53■■□□□ 1.84
SEMA4F-201ENST00000339773 SMARCA4P51532 1647 aa26.41■■□□□ 1.82
SEMA4F-201ENST00000339773 TOP2AP11388 1531 aaKnown RBP26.15■■□□□ 1.78
SEMA4F-201ENST00000339773 LOC105371045A0A1W2PR82 267 aa25.99■■□□□ 1.75
SEMA4F-201ENST00000339773 CCDC88BA6NC98 1476 aa25.97■■□□□ 1.75
SEMA4F-201ENST00000339773 PEG3Q9GZU2 1588 aa25.96■■□□□ 1.75
SEMA4F-201ENST00000339773 SMARCA2P51531 1590 aa25.95■■□□□ 1.75
SEMA4F-201ENST00000339773 TRIM41Q8WV44 630 aa25.93■■□□□ 1.74
SEMA4F-201ENST00000339773 ATAD2BQ9ULI0 1458 aa25.91■■□□□ 1.74
SEMA4F-201ENST00000339773 BAZ1BQ9UIG0 1483 aaKnown RBP25.82■■□□□ 1.72
SEMA4F-201ENST00000339773 EIF4G1Q04637 1599 aaKnown RBP25.82■■□□□ 1.72
SEMA4F-201ENST00000339773 FAM9AQ8IZU1 332 aaPredicted RBP25.68■■□□□ 1.7
SEMA4F-201ENST00000339773 PCGF6Q9BYE7 350 aa25.68■■□□□ 1.7
SEMA4F-201ENST00000339773 ABCC8Q09428 1581 aa25.64■■□□□ 1.7
SEMA4F-201ENST00000339773 NCAPD3P42695 1498 aa25.57■■□□□ 1.68
SEMA4F-201ENST00000339773 HRCP23327 699 aa25.54■■□□□ 1.68
SEMA4F-201ENST00000339773 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
SEMA4F-201ENST00000339773 EHMT2Q96KQ7 1210 aa25.52■■□□□ 1.68
SEMA4F-201ENST00000339773 CC2D2AQ9P2K1 1620 aa25.38■■□□□ 1.65
SEMA4F-201ENST00000339773 WRNQ14191 1432 aaPredicted RBP eCLIP25.32■■□□□ 1.64
SEMA4F-201ENST00000339773 TRIM26Q12899 539 aaPredicted RBP25.31■■□□□ 1.64
SEMA4F-201ENST00000339773 SOGA1O94964 1423 aa25.22■■□□□ 1.63
SEMA4F-201ENST00000339773 SYNJ1O43426 1573 aa25.22■■□□□ 1.63
SEMA4F-201ENST00000339773 RUSC2Q8N2Y8 1516 aa25.16■■□□□ 1.62
SEMA4F-201ENST00000339773 CFTRP13569 1480 aa25.13■■□□□ 1.61
SEMA4F-201ENST00000339773 DNAJC5BQ9UF47 199 aa25.03■■□□□ 1.6
SEMA4F-201ENST00000339773 TOP2BQ02880 1626 aa25.01■■□□□ 1.59
SEMA4F-201ENST00000339773 CADPSQ9ULU8 1353 aa25■■□□□ 1.59
SEMA4F-201ENST00000339773 PPARGC1BQ86YN6 1023 aaKnown RBP25■■□□□ 1.59
SEMA4F-201ENST00000339773 CSRNP3Q8WYN3 585 aa25■■□□□ 1.59
SEMA4F-201ENST00000339773 EEA1Q15075 1411 aa25■■□□□ 1.59
SEMA4F-201ENST00000339773 BIVM-ERCC5R4GMW8 1640 aa24.95■■□□□ 1.58
SEMA4F-201ENST00000339773 PRDM2Q13029 1718 aa24.94■■□□□ 1.58
SEMA4F-201ENST00000339773 CUX1P39880 1505 aa24.93■■□□□ 1.58
SEMA4F-201ENST00000339773 NESP48681 1621 aa24.87■■□□□ 1.57
SEMA4F-201ENST00000339773 UBTFP17480 764 aaKnown RBP24.82■■□□□ 1.56
SEMA4F-201ENST00000339773 GOLGA3Q08378 1498 aa24.78■■□□□ 1.56
SEMA4F-201ENST00000339773 FANCD2Q9BXW9 1451 aa24.77■■□□□ 1.56
SEMA4F-201ENST00000339773 TNIKQ9UKE5 1360 aa24.74■■□□□ 1.55
SEMA4F-201ENST00000339773 CEP164Q9UPV0 1460 aa24.72■■□□□ 1.55
SEMA4F-201ENST00000339773 CEP162Q5TB80 1403 aa24.71■■□□□ 1.55
SEMA4F-201ENST00000339773 KIF21BO75037 1637 aa24.69■■□□□ 1.54
SEMA4F-201ENST00000339773 LAMC3Q9Y6N6 1575 aa24.64■■□□□ 1.53
SEMA4F-201ENST00000339773 ZEB1P37275 1124 aaPredicted RBP24.64■■□□□ 1.53
SEMA4F-201ENST00000339773 RAPGEF2Q9Y4G8 1499 aa24.64■■□□□ 1.53
SEMA4F-201ENST00000339773 KIF27Q86VH2 1401 aa24.63■■□□□ 1.53
SEMA4F-201ENST00000339773 FGD5Q6ZNL6 1462 aa24.62■■□□□ 1.53
SEMA4F-201ENST00000339773 RANGAP1P46060 587 aaPredicted RBP24.58■■□□□ 1.53
SEMA4F-201ENST00000339773 CUX2O14529 1486 aa24.56■■□□□ 1.52
SEMA4F-201ENST00000339773 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
SEMA4F-201ENST00000339773 TOPBP1Q92547 1522 aa24.52■■□□□ 1.52
SEMA4F-201ENST00000339773 PRXQ9BXM0 1461 aa24.51■■□□□ 1.51
SEMA4F-201ENST00000339773 PDS5BQ9NTI5 1447 aa24.49■■□□□ 1.51
SEMA4F-201ENST00000339773 RAD54L2Q9Y4B4 1467 aa24.47■■□□□ 1.51
SEMA4F-201ENST00000339773 TTBK1Q5TCY1 1321 aaPredicted RBP24.45■■□□□ 1.51
SEMA4F-201ENST00000339773 ERICH3Q5RHP9 1530 aa24.45■■□□□ 1.5
SEMA4F-201ENST00000339773 URB2Q14146 1524 aaKnown RBP24.45■■□□□ 1.5
SEMA4F-201ENST00000339773 POLA1P09884 1462 aaPredicted RBP24.44■■□□□ 1.5
SEMA4F-201ENST00000339773 CLIP1P30622 1438 aa24.44■■□□□ 1.5
SEMA4F-201ENST00000339773 KIF21AQ7Z4S6 1674 aa24.44■■□□□ 1.5
SEMA4F-201ENST00000339773 IGF1RP08069 1367 aa24.4■■□□□ 1.5
SEMA4F-201ENST00000339773 ABCA10Q8WWZ4 1543 aa24.32■■□□□ 1.48
SEMA4F-201ENST00000339773 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.31■■□□□ 1.48
SEMA4F-201ENST00000339773 CARMIL1Q5VZK9 1371 aa24.3■■□□□ 1.48
SEMA4F-201ENST00000339773 TDRD9Q8NDG6 1382 aaKnown RBP24.23■■□□□ 1.47
SEMA4F-201ENST00000339773 CCER1Q8TC90 406 aaPredicted RBP24.23■■□□□ 1.47
SEMA4F-201ENST00000339773 VPS8Q8N3P4 1428 aa24.23■■□□□ 1.47
SEMA4F-201ENST00000339773 WDR97A6NE52 1622 aa24.2■■□□□ 1.46
SEMA4F-201ENST00000339773 MRC2Q9UBG0 1479 aa24.17■■□□□ 1.46
SEMA4F-201ENST00000339773 ARAP1Q96P48 1450 aa24.14■■□□□ 1.45
SEMA4F-201ENST00000339773 APLP2Q06481 763 aa24.11■■□□□ 1.45
SEMA4F-201ENST00000339773 ABCA5Q8WWZ7 1642 aa24.11■■□□□ 1.45
SEMA4F-201ENST00000339773 GAPVD1Q14C86 1478 aa24.1■■□□□ 1.45
SEMA4F-201ENST00000339773 TARBP1Q13395 1621 aaKnown RBP24.09■■□□□ 1.45
SEMA4F-201ENST00000339773 CUL7Q14999 1698 aa24.08■■□□□ 1.45
SEMA4F-201ENST00000339773 ERCC6Q03468 1493 aa24.07■■□□□ 1.44
SEMA4F-201ENST00000339773 ARHGAP35Q9NRY4 1499 aa24.07■■□□□ 1.44
SEMA4F-201ENST00000339773 AQRO60306 1485 aaKnown RBP eCLIP24.01■■□□□ 1.43
SEMA4F-201ENST00000339773 WDR62O43379 1518 aa24■■□□□ 1.43
SEMA4F-201ENST00000339773 P3H3Q8IVL6 736 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms