RNA–Protein interactions for RNA: ENST00000339463.7

GFI1B-201, Transcript of growth factor independent 1B transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GFI1B, Length 2,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1B-201ENST00000339463 NISCHQ9Y2I1 1504 aa23.84■■□□□ 1.41
GFI1B-201ENST00000339463 CCDC180Q9P1Z9 1646 aa20.38■□□□□ 0.85
GFI1B-201ENST00000339463 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
GFI1B-201ENST00000339463 SHROOM4Q9ULL8 1493 aa20.09■□□□□ 0.81
GFI1B-201ENST00000339463 DCAF8L2P0C7V8 631 aa19.8■□□□□ 0.76
GFI1B-201ENST00000339463 SUPT5HO00267 1087 aaKnown RBP19.57■□□□□ 0.72
GFI1B-201ENST00000339463 DCAF1Q9Y4B6 1507 aa19.57■□□□□ 0.72
GFI1B-201ENST00000339463 PELP1Q8IZL8 1130 aaKnown RBP19.18■□□□□ 0.66
GFI1B-201ENST00000339463 MYO15BQ96JP2 1530 aa19.12■□□□□ 0.65
GFI1B-201ENST00000339463 ABCC9O60706 1549 aa19.1■□□□□ 0.65
GFI1B-201ENST00000339463 SCRIBQ14160 1630 aa19.05■□□□□ 0.64
GFI1B-201ENST00000339463 NACADO15069 1562 aa18.92■□□□□ 0.62
GFI1B-201ENST00000339463 CHIC1Q5VXU3 224 aa18.92■□□□□ 0.62
GFI1B-201ENST00000339463 MYT1Q01538 1121 aa18.91■□□□□ 0.62
GFI1B-201ENST00000339463 RSF1Q96T23 1441 aaPredicted RBP18.77■□□□□ 0.59
GFI1B-201ENST00000339463 RB1CC1Q8TDY2 1594 aa18.66■□□□□ 0.58
GFI1B-201ENST00000339463 CECR2Q9BXF3 1484 aa18.62■□□□□ 0.57
GFI1B-201ENST00000339463 MROH2BQ7Z745 1585 aa18.52■□□□□ 0.56
GFI1B-201ENST00000339463 WIZO95785 1651 aa18.39■□□□□ 0.53
GFI1B-201ENST00000339463 UNC13AQ9UPW8 1703 aa18.37■□□□□ 0.53
GFI1B-201ENST00000339463 LOC105371045A0A1W2PR82 267 aa18.34■□□□□ 0.53
GFI1B-201ENST00000339463 BAZ1AQ9NRL2 1556 aaPredicted RBP18.33■□□□□ 0.52
GFI1B-201ENST00000339463 TRIM41Q8WV44 630 aa18.27■□□□□ 0.51
GFI1B-201ENST00000339463 PABPN1Q86U42 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
GFI1B-201ENST00000339463 SMARCA4P51532 1647 aa18.2■□□□□ 0.5
GFI1B-201ENST00000339463 TTBK1Q5TCY1 1321 aaPredicted RBP18.2■□□□□ 0.5
GFI1B-201ENST00000339463 BICRAQ9NZM4 1560 aa18.18■□□□□ 0.5
GFI1B-201ENST00000339463 TOP2AP11388 1531 aaKnown RBP18.11■□□□□ 0.49
GFI1B-201ENST00000339463 FAM9AQ8IZU1 332 aaPredicted RBP18.09■□□□□ 0.49
GFI1B-201ENST00000339463 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
GFI1B-201ENST00000339463 PCGF6Q9BYE7 350 aa18.04■□□□□ 0.48
GFI1B-201ENST00000339463 CCDC88BA6NC98 1476 aa18.03■□□□□ 0.48
GFI1B-201ENST00000339463 SMARCA2P51531 1590 aa18■□□□□ 0.47
GFI1B-201ENST00000339463 EHMT2Q96KQ7 1210 aa17.93■□□□□ 0.46
GFI1B-201ENST00000339463 ABCC8Q09428 1581 aa17.89■□□□□ 0.45
GFI1B-201ENST00000339463 PEG3Q9GZU2 1588 aa17.89■□□□□ 0.45
GFI1B-201ENST00000339463 HRCP23327 699 aa17.84■□□□□ 0.45
GFI1B-201ENST00000339463 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
GFI1B-201ENST00000339463 TRIM26Q12899 539 aaPredicted RBP17.76■□□□□ 0.43
GFI1B-201ENST00000339463 BAZ1BQ9UIG0 1483 aaKnown RBP17.74■□□□□ 0.43
GFI1B-201ENST00000339463 SOGA1O94964 1423 aa17.67■□□□□ 0.42
GFI1B-201ENST00000339463 PRKCSHP14314 528 aaPredicted RBP17.64■□□□□ 0.41
GFI1B-201ENST00000339463 WRNQ14191 1432 aaPredicted RBP eCLIP17.63■□□□□ 0.41
GFI1B-201ENST00000339463 RUSC2Q8N2Y8 1516 aa17.6■□□□□ 0.41
GFI1B-201ENST00000339463 SYNJ1O43426 1573 aa17.55■□□□□ 0.4
GFI1B-201ENST00000339463 CSRNP3Q8WYN3 585 aa17.53■□□□□ 0.4
GFI1B-201ENST00000339463 NCAPD3P42695 1498 aa17.52■□□□□ 0.4
GFI1B-201ENST00000339463 PPARGC1BQ86YN6 1023 aaKnown RBP17.52■□□□□ 0.4
GFI1B-201ENST00000339463 EEA1Q15075 1411 aa17.52■□□□□ 0.4
GFI1B-201ENST00000339463 HMGXB3Q12766 1538 aa17.49■□□□□ 0.39
GFI1B-201ENST00000339463 CEP162Q5TB80 1403 aa17.46■□□□□ 0.39
GFI1B-201ENST00000339463 TNIKQ9UKE5 1360 aa17.44■□□□□ 0.38
GFI1B-201ENST00000339463 UBTFP17480 764 aaKnown RBP17.43■□□□□ 0.38
GFI1B-201ENST00000339463 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
GFI1B-201ENST00000339463 GOLGA3Q08378 1498 aa17.39■□□□□ 0.37
GFI1B-201ENST00000339463 TOP2BQ02880 1626 aa17.36■□□□□ 0.37
GFI1B-201ENST00000339463 ERICH6Q7L0X2 663 aa17.35■□□□□ 0.37
GFI1B-201ENST00000339463 CEP164Q9UPV0 1460 aa17.32■□□□□ 0.36
GFI1B-201ENST00000339463 CFTRP13569 1480 aa17.31■□□□□ 0.36
GFI1B-201ENST00000339463 KIF21BO75037 1637 aa17.3■□□□□ 0.36
GFI1B-201ENST00000339463 BIVM-ERCC5R4GMW8 1640 aa17.29■□□□□ 0.36
GFI1B-201ENST00000339463 APLP2Q06481 763 aa17.28■□□□□ 0.36
GFI1B-201ENST00000339463 RAPGEF2Q9Y4G8 1499 aa17.26■□□□□ 0.35
GFI1B-201ENST00000339463 CUX1P39880 1505 aa17.26■□□□□ 0.35
GFI1B-201ENST00000339463 BCL11AQ9H165 835 aa17.25■□□□□ 0.35
GFI1B-201ENST00000339463 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
GFI1B-201ENST00000339463 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
GFI1B-201ENST00000339463 CLIP1P30622 1438 aa17.19■□□□□ 0.34
GFI1B-201ENST00000339463 CADPSQ9ULU8 1353 aa17.16■□□□□ 0.34
GFI1B-201ENST00000339463 RANGAP1P46060 587 aaPredicted RBP17.15■□□□□ 0.34
GFI1B-201ENST00000339463 PRXQ9BXM0 1461 aa17.13■□□□□ 0.33
GFI1B-201ENST00000339463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
GFI1B-201ENST00000339463 PRDM2Q13029 1718 aa17.11■□□□□ 0.33
GFI1B-201ENST00000339463 KIF27Q86VH2 1401 aa17.1■□□□□ 0.33
GFI1B-201ENST00000339463 ERICH3Q5RHP9 1530 aa17.08■□□□□ 0.33
GFI1B-201ENST00000339463 VPS8Q8N3P4 1428 aa17.08■□□□□ 0.32
GFI1B-201ENST00000339463 SLC24A1O60721 1099 aa17.07■□□□□ 0.32
GFI1B-201ENST00000339463 CCER1Q8TC90 406 aaPredicted RBP17.03■□□□□ 0.32
GFI1B-201ENST00000339463 CUX2O14529 1486 aa17■□□□□ 0.31
GFI1B-201ENST00000339463 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
GFI1B-201ENST00000339463 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
GFI1B-201ENST00000339463 NESP48681 1621 aa16.96■□□□□ 0.31
GFI1B-201ENST00000339463 IGF1RP08069 1367 aa16.96■□□□□ 0.31
GFI1B-201ENST00000339463 ARAP1Q96P48 1450 aa16.95■□□□□ 0.3
GFI1B-201ENST00000339463 DNAJC5BQ9UF47 199 aa16.92■□□□□ 0.3
GFI1B-201ENST00000339463 HNRNPUL2Q1KMD3 747 aaKnown RBP16.87■□□□□ 0.29
GFI1B-201ENST00000339463 CARMIL1Q5VZK9 1371 aa16.86■□□□□ 0.29
GFI1B-201ENST00000339463 ARHGAP35Q9NRY4 1499 aa16.86■□□□□ 0.29
GFI1B-201ENST00000339463 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
GFI1B-201ENST00000339463 RAD54L2Q9Y4B4 1467 aa16.85■□□□□ 0.29
GFI1B-201ENST00000339463 TOPBP1Q92547 1522 aa16.85■□□□□ 0.29
GFI1B-201ENST00000339463 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.29
GFI1B-201ENST00000339463 KANK4Q5T7N3 995 aaPredicted RBP16.83■□□□□ 0.28
GFI1B-201ENST00000339463 CENPBP07199 599 aaPredicted RBP16.81■□□□□ 0.28
GFI1B-201ENST00000339463 LAMC3Q9Y6N6 1575 aa16.8■□□□□ 0.28
GFI1B-201ENST00000339463 ABCA10Q8WWZ4 1543 aa16.79■□□□□ 0.28
GFI1B-201ENST00000339463 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
GFI1B-201ENST00000339463 PDS5BQ9NTI5 1447 aa16.7■□□□□ 0.26
GFI1B-201ENST00000339463 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
GFI1B-201ENST00000339463 P3H3Q8IVL6 736 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms