RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 DCAF8L2P0C7V8 631 aa25.79■■□□□ 1.72
PARVB-201ENST00000338758 NISCHQ9Y2I1 1504 aa25.59■■□□□ 1.69
PARVB-201ENST00000338758 SUPT5HO00267 1087 aaKnown RBP24.21■■□□□ 1.47
PARVB-201ENST00000338758 SHROOM4Q9ULL8 1493 aa24.1■■□□□ 1.45
PARVB-201ENST00000338758 EHMT2Q96KQ7 1210 aa23.2■■□□□ 1.31
PARVB-201ENST00000338758 FAM9AQ8IZU1 332 aaPredicted RBP22.78■■□□□ 1.24
PARVB-201ENST00000338758 APLP2Q06481 763 aa22.52■■□□□ 1.2
PARVB-201ENST00000338758 TRIM41Q8WV44 630 aa22.44■■□□□ 1.18
PARVB-201ENST00000338758 RANGAP1P46060 587 aaPredicted RBP22.33■■□□□ 1.17
PARVB-201ENST00000338758 TTBK1Q5TCY1 1321 aaPredicted RBP22.3■■□□□ 1.16
PARVB-201ENST00000338758 ABCC9O60706 1549 aa22.22■■□□□ 1.15
PARVB-201ENST00000338758 UBTFP17480 764 aaKnown RBP22.09■■□□□ 1.13
PARVB-201ENST00000338758 ATP1B4Q9UN42 357 aaPredicted RBP22.04■■□□□ 1.12
PARVB-201ENST00000338758 PCGF6Q9BYE7 350 aa22.01■■□□□ 1.11
PARVB-201ENST00000338758 PABPN1Q86U42 306 aaKnown RBP eCLIP21.97■■□□□ 1.11
PARVB-201ENST00000338758 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
PARVB-201ENST00000338758 PPARGC1BQ86YN6 1023 aaKnown RBP21.64■■□□□ 1.05
PARVB-201ENST00000338758 CCER1Q8TC90 406 aaPredicted RBP21.58■■□□□ 1.05
PARVB-201ENST00000338758 LOC105371045A0A1W2PR82 267 aa21.54■■□□□ 1.04
PARVB-201ENST00000338758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.41■■□□□ 1.02
PARVB-201ENST00000338758 HNRNPUL2Q1KMD3 747 aaKnown RBP21.41■■□□□ 1.02
PARVB-201ENST00000338758 ZEB1P37275 1124 aaPredicted RBP21.34■■□□□ 1.01
PARVB-201ENST00000338758 ITGAEP38570 1179 aa21.27■■□□□ 1
PARVB-201ENST00000338758 TRIM26Q12899 539 aaPredicted RBP21.2■□□□□ 0.98
PARVB-201ENST00000338758 MYT1LQ9UL68 1186 aa21.17■□□□□ 0.98
PARVB-201ENST00000338758 ZCCHC6Q5VYS8 1495 aaKnown RBP21.16■□□□□ 0.98
PARVB-201ENST00000338758 SCRIBQ14160 1630 aa21.12■□□□□ 0.97
PARVB-201ENST00000338758 PELP1Q8IZL8 1130 aaKnown RBP21.11■□□□□ 0.97
PARVB-201ENST00000338758 CCDC180Q9P1Z9 1646 aa21.03■□□□□ 0.96
PARVB-201ENST00000338758 FBLN2P98095 1184 aa20.98■□□□□ 0.95
PARVB-201ENST00000338758 CENPBP07199 599 aaPredicted RBP20.88■□□□□ 0.93
PARVB-201ENST00000338758 FAM50AQ14320 339 aaKnown RBP20.8■□□□□ 0.92
PARVB-201ENST00000338758 CSRNP3Q8WYN3 585 aa20.79■□□□□ 0.92
PARVB-201ENST00000338758 YTHDC1Q96MU7 727 aaKnown RBP20.75■□□□□ 0.91
PARVB-201ENST00000338758 POLR3GLQ9BT43 218 aa20.74■□□□□ 0.91
PARVB-201ENST00000338758 P3H3Q8IVL6 736 aa20.72■□□□□ 0.91
PARVB-201ENST00000338758 HRCP23327 699 aa20.69■□□□□ 0.9
PARVB-201ENST00000338758 RB1CC1Q8TDY2 1594 aa20.69■□□□□ 0.9
PARVB-201ENST00000338758 ARID3CA6NKF2 412 aa20.64■□□□□ 0.89
PARVB-201ENST00000338758 TRIM52Q96A61 297 aa20.59■□□□□ 0.89
PARVB-201ENST00000338758 CNGB1Q14028 1251 aaPredicted RBP20.57■□□□□ 0.88
PARVB-201ENST00000338758 NACADO15069 1562 aa20.52■□□□□ 0.88
PARVB-201ENST00000338758 NEFLP07196 543 aa20.51■□□□□ 0.87
PARVB-201ENST00000338758 NEUROD1Q13562 356 aa20.44■□□□□ 0.86
PARVB-201ENST00000338758 RSF1Q96T23 1441 aaPredicted RBP20.43■□□□□ 0.86
PARVB-201ENST00000338758 SLC4A1APQ9BWU0 796 aaKnown RBP20.37■□□□□ 0.85
PARVB-201ENST00000338758 ZNF777Q9ULD5 760 aaPredicted RBP20.35■□□□□ 0.85
PARVB-201ENST00000338758 CDK11AQ9UQ88 783 aaPredicted RBP20.33■□□□□ 0.84
PARVB-201ENST00000338758 ZNF326Q5BKZ1 582 aaKnown RBP20.3■□□□□ 0.84
PARVB-201ENST00000338758 BAZ1BQ9UIG0 1483 aaKnown RBP20.24■□□□□ 0.83
PARVB-201ENST00000338758 CHMP7Q8WUX9 453 aaPredicted RBP20.22■□□□□ 0.83
PARVB-201ENST00000338758 DCAF1Q9Y4B6 1507 aa20.2■□□□□ 0.82
PARVB-201ENST00000338758 ERICH6Q7L0X2 663 aa20.2■□□□□ 0.82
PARVB-201ENST00000338758 DIEXFQ68CQ4 756 aaKnown RBP20.19■□□□□ 0.82
PARVB-201ENST00000338758 CECR2Q9BXF3 1484 aa20.19■□□□□ 0.82
PARVB-201ENST00000338758 NPM1P06748 294 aaKnown RBP eCLIP20.17■□□□□ 0.82
PARVB-201ENST00000338758 WRNQ14191 1432 aaPredicted RBP eCLIP20.08■□□□□ 0.81
PARVB-201ENST00000338758 BAZ1AQ9NRL2 1556 aaPredicted RBP20.08■□□□□ 0.8
PARVB-201ENST00000338758 BCANQ96GW7 911 aa20■□□□□ 0.79
PARVB-201ENST00000338758 CHIC2Q9UKJ5 165 aa20■□□□□ 0.79
PARVB-201ENST00000338758 CLIP1P30622 1438 aa19.99■□□□□ 0.79
PARVB-201ENST00000338758 MTUS2Q5JR59 1369 aa19.96■□□□□ 0.79
PARVB-201ENST00000338758 ESF1Q9H501 851 aaKnown RBP19.95■□□□□ 0.78
PARVB-201ENST00000338758 EEA1Q15075 1411 aa19.92■□□□□ 0.78
PARVB-201ENST00000338758 KIF27Q86VH2 1401 aa19.9■□□□□ 0.78
PARVB-201ENST00000338758 ANP32CO43423 234 aa19.9■□□□□ 0.78
PARVB-201ENST00000338758 ERCC6Q03468 1493 aa19.9■□□□□ 0.78
PARVB-201ENST00000338758 ZNF316A6NFI3 1004 aaPredicted RBP19.89■□□□□ 0.78
PARVB-201ENST00000338758 CHGAP10645 457 aaKnown RBP19.89■□□□□ 0.77
PARVB-201ENST00000338758 TSPY4P0CV99 314 aa19.89■□□□□ 0.77
PARVB-201ENST00000338758 TSPY10P0CW01 314 aa19.89■□□□□ 0.77
PARVB-201ENST00000338758 PLPPR3Q6T4P5 718 aa19.87■□□□□ 0.77
PARVB-201ENST00000338758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.86■□□□□ 0.77
PARVB-201ENST00000338758 MROH2BQ7Z745 1585 aa19.86■□□□□ 0.77
PARVB-201ENST00000338758 KCNH8Q96L42 1107 aa19.85■□□□□ 0.77
PARVB-201ENST00000338758 GOLGA3Q08378 1498 aa19.84■□□□□ 0.77
PARVB-201ENST00000338758 MYO15BQ96JP2 1530 aa19.83■□□□□ 0.76
PARVB-201ENST00000338758 STAG3Q9UJ98 1225 aa19.81■□□□□ 0.76
PARVB-201ENST00000338758 TONSLQ96HA7 1378 aa19.8■□□□□ 0.76
PARVB-201ENST00000338758 CEP162Q5TB80 1403 aa19.8■□□□□ 0.76
PARVB-201ENST00000338758 PLEKHD1A6NEE1 506 aa19.8■□□□□ 0.76
PARVB-201ENST00000338758 CCDC88BA6NC98 1476 aa19.72■□□□□ 0.75
PARVB-201ENST00000338758 RRP7BPQ9NSQ0 103 aa19.71■□□□□ 0.75
PARVB-201ENST00000338758 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
PARVB-201ENST00000338758 TNIKQ9UKE5 1360 aa19.7■□□□□ 0.74
PARVB-201ENST00000338758 DAXXQ9UER7 740 aaPredicted RBP19.69■□□□□ 0.74
PARVB-201ENST00000338758 CUX2O14529 1486 aa19.68■□□□□ 0.74
PARVB-201ENST00000338758 SOGA1O94964 1423 aa19.66■□□□□ 0.74
PARVB-201ENST00000338758 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
PARVB-201ENST00000338758 CARMIL1Q5VZK9 1371 aa19.65■□□□□ 0.74
PARVB-201ENST00000338758 CLSPNQ9HAW4 1339 aa19.63■□□□□ 0.73
PARVB-201ENST00000338758 KDM2AQ9Y2K7 1162 aa19.63■□□□□ 0.73
PARVB-201ENST00000338758 CFDP1Q9UEE9 299 aaPredicted RBP19.63■□□□□ 0.73
PARVB-201ENST00000338758 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
PARVB-201ENST00000338758 SLC24A1O60721 1099 aa19.59■□□□□ 0.73
PARVB-201ENST00000338758 NEFMP07197 916 aa19.57■□□□□ 0.72
PARVB-201ENST00000338758 DDX10Q13206 875 aaKnown RBP19.57■□□□□ 0.72
PARVB-201ENST00000338758 TDRD9Q8NDG6 1382 aaKnown RBP19.56■□□□□ 0.72
PARVB-201ENST00000338758 ABCC8Q09428 1581 aa19.53■□□□□ 0.72
PARVB-201ENST00000338758 CADPSQ9ULU8 1353 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms