RNA–Protein interactions for RNA: ENST00000338660.5

VWA1-201, Transcript of von Willebrand factor A domain containing 1, humanhuman

TSL 2 BASIC

Gene VWA1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA1-201ENST00000338660 UPF1Q92900 1129 aaKnown RBP eCLIP27.33■■□□□ 1.972e-25■■■■■ 76.1
VWA1-201ENST00000338660 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.88■□□□□ 0.771e-14■■□□□ 12.5
VWA1-201ENST00000338660 RPS3P23396 243 aaKnown RBP eCLIP25.77■■□□□ 1.722e-9■■■■□ 22.2
VWA1-201ENST00000338660 SND1Q7KZF4 910 aaKnown RBP eCLIP28.35■■■□□ 2.134e-9■■■■■ 36.3
VWA1-201ENST00000338660 FTOQ9C0B1 505 aaKnown RBP eCLIP30.56■■■□□ 2.482e-8■□□□□ 11
VWA1-201ENST00000338660 AQRO60306 1485 aaKnown RBP eCLIP38.69■■■■□ 3.785e-8■■■■■ 28.2
VWA1-201ENST00000338660 PCBP1Q15365 356 aaKnown RBP eCLIP27.22■■□□□ 1.958e-8■■■■□ 21
VWA1-201ENST00000338660 PRPF4O43172 522 aaKnown RBP eCLIP27.25■■□□□ 1.959e-8■■■■■ 33.2
VWA1-201ENST00000338660 GRSF1Q12849 480 aaKnown RBP eCLIP25.1■■□□□ 1.611e-7■■■□□ 15
VWA1-201ENST00000338660 LARP4Q71RC2 724 aaKnown RBP eCLIP26.03■■□□□ 1.761e-7■■□□□ 13.9
VWA1-201ENST00000338660 RBM22Q9NW64 420 aaKnown RBP eCLIP26.49■■□□□ 1.832e-7■□□□□ 8.8
VWA1-201ENST00000338660 AKAP1Q92667 903 aaKnown RBP eCLIP23.56■■□□□ 1.362e-7■■■■■ 86.8
VWA1-201ENST00000338660 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.97■■□□□ 1.752e-7■□□□□ 9
VWA1-201ENST00000338660 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.76■■□□□ 1.393e-7■■■■□ 20.8
VWA1-201ENST00000338660 DDX3XO00571 662 aaKnown RBP eCLIP28.43■■■□□ 2.145e-7■■■□□ 17.4
VWA1-201ENST00000338660 SF3B1O75533 1304 aaKnown RBP eCLIP26.91■■□□□ 1.96e-7■■■■■ 170.9
VWA1-201ENST00000338660 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.34■■□□□ 1.817e-7■■■■■ 28.4
VWA1-201ENST00000338660 PCBP2Q15366 365 aaKnown RBP eCLIP25.76■■□□□ 1.719e-7■■■□□ 15.2
VWA1-201ENST00000338660 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.77■■■□□ 2.049e-7■■■□□ 14.7
VWA1-201ENST00000338660 EFTUD2Q15029 972 aaKnown RBP eCLIP27.19■■□□□ 1.941e-6■■■■■ 42.2
VWA1-201ENST00000338660 DDX6P26196 483 aaKnown RBP eCLIP25.46■■□□□ 1.671e-6■■□□□ 12.2
VWA1-201ENST00000338660 NOL12Q9UGY1 213 aaKnown RBP eCLIP29.37■■■□□ 2.291e-6■□□□□ 9.7
VWA1-201ENST00000338660 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.19■■□□□ 1.942e-6■■■□□ 17.9
VWA1-201ENST00000338660 TROVE2P10155 538 aaKnown RBP eCLIP26.91■■□□□ 1.92e-6■■■■□ 22.7
VWA1-201ENST00000338660 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.26■■■□□ 2.113e-6■■■■■ 65.4
VWA1-201ENST00000338660 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.05■■■□□ 2.084e-6■□□□□ 9.2
VWA1-201ENST00000338660 RBFOX2O43251 390 aaKnown RBP eCLIP21.58■■□□□ 1.059e-6■■□□□ 11.6
Retrieved 27 of 27 RNA–protein pairs in 12.9 ms