RNA–Protein interactions for RNA: ENST00000338056.7

RUNDC3B-202, Transcript of RUN domain containing 3B, humanhuman

TSL 2 BASIC

Gene RUNDC3B, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3B-202ENST00000338056 NISCHQ9Y2I1 1504 aa28.49■■■□□ 2.15
RUNDC3B-202ENST00000338056 DCAF8L2P0C7V8 631 aa28.31■■■□□ 2.12
RUNDC3B-202ENST00000338056 SUPT5HO00267 1087 aaKnown RBP27.31■■□□□ 1.96
RUNDC3B-202ENST00000338056 SHROOM4Q9ULL8 1493 aa27.19■■□□□ 1.94
RUNDC3B-202ENST00000338056 EHMT2Q96KQ7 1210 aa26.28■■□□□ 1.8
RUNDC3B-202ENST00000338056 FAM9AQ8IZU1 332 aaPredicted RBP25.69■■□□□ 1.7
RUNDC3B-202ENST00000338056 PCGF6Q9BYE7 350 aa25.45■■□□□ 1.66
RUNDC3B-202ENST00000338056 TTBK1Q5TCY1 1321 aaPredicted RBP25.29■■□□□ 1.64
RUNDC3B-202ENST00000338056 TRIM41Q8WV44 630 aa25.06■■□□□ 1.6
RUNDC3B-202ENST00000338056 RANGAP1P46060 587 aaPredicted RBP24.94■■□□□ 1.58
RUNDC3B-202ENST00000338056 LOC105371045A0A1W2PR82 267 aa24.83■■□□□ 1.56
RUNDC3B-202ENST00000338056 PPARGC1BQ86YN6 1023 aaKnown RBP24.83■■□□□ 1.56
RUNDC3B-202ENST00000338056 CHIC1Q5VXU3 224 aa24.78■■□□□ 1.56
RUNDC3B-202ENST00000338056 APLP2Q06481 763 aa24.68■■□□□ 1.54
RUNDC3B-202ENST00000338056 UBTFP17480 764 aaKnown RBP24.54■■□□□ 1.52
RUNDC3B-202ENST00000338056 CCER1Q8TC90 406 aaPredicted RBP24.44■■□□□ 1.5
RUNDC3B-202ENST00000338056 ATP1B4Q9UN42 357 aaPredicted RBP24.26■■□□□ 1.47
RUNDC3B-202ENST00000338056 ABCC9O60706 1549 aa24.22■■□□□ 1.47
RUNDC3B-202ENST00000338056 HRCP23327 699 aa24.21■■□□□ 1.47
RUNDC3B-202ENST00000338056 TRIM26Q12899 539 aaPredicted RBP24.2■■□□□ 1.47
RUNDC3B-202ENST00000338056 ZEB1P37275 1124 aaPredicted RBP24.09■■□□□ 1.45
RUNDC3B-202ENST00000338056 PABPN1Q86U42 306 aaKnown RBP eCLIP24.09■■□□□ 1.45
RUNDC3B-202ENST00000338056 YTHDC1Q96MU7 727 aaKnown RBP23.9■■□□□ 1.42
RUNDC3B-202ENST00000338056 HNRNPUL2Q1KMD3 747 aaKnown RBP23.85■■□□□ 1.41
RUNDC3B-202ENST00000338056 ITGAEP38570 1179 aa23.85■■□□□ 1.41
RUNDC3B-202ENST00000338056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.83■■□□□ 1.41
RUNDC3B-202ENST00000338056 CENPBP07199 599 aaPredicted RBP23.72■■□□□ 1.39
RUNDC3B-202ENST00000338056 ZCCHC6Q5VYS8 1495 aaKnown RBP23.66■■□□□ 1.38
RUNDC3B-202ENST00000338056 PELP1Q8IZL8 1130 aaKnown RBP23.52■■□□□ 1.36
RUNDC3B-202ENST00000338056 SCRIBQ14160 1630 aa23.4■■□□□ 1.34
RUNDC3B-202ENST00000338056 MYO15BQ96JP2 1530 aa23.28■■□□□ 1.32
RUNDC3B-202ENST00000338056 DIEXFQ68CQ4 756 aaKnown RBP23.24■■□□□ 1.31
RUNDC3B-202ENST00000338056 CNGB1Q14028 1251 aaPredicted RBP23.22■■□□□ 1.31
RUNDC3B-202ENST00000338056 CSRNP3Q8WYN3 585 aa23.21■■□□□ 1.31
RUNDC3B-202ENST00000338056 FAM50AQ14320 339 aaKnown RBP23.13■■□□□ 1.29
RUNDC3B-202ENST00000338056 POLR3GLQ9BT43 218 aa23.1■■□□□ 1.29
RUNDC3B-202ENST00000338056 P3H3Q8IVL6 736 aa23.09■■□□□ 1.29
RUNDC3B-202ENST00000338056 CCDC180Q9P1Z9 1646 aa23.06■■□□□ 1.28
RUNDC3B-202ENST00000338056 NEUROD1Q13562 356 aa23.01■■□□□ 1.27
RUNDC3B-202ENST00000338056 NEFLP07196 543 aa22.98■■□□□ 1.27
RUNDC3B-202ENST00000338056 RSF1Q96T23 1441 aaPredicted RBP22.97■■□□□ 1.27
RUNDC3B-202ENST00000338056 ARID3CA6NKF2 412 aa22.93■■□□□ 1.26
RUNDC3B-202ENST00000338056 DCAF1Q9Y4B6 1507 aa22.83■■□□□ 1.25
RUNDC3B-202ENST00000338056 MYT1LQ9UL68 1186 aa22.82■■□□□ 1.24
RUNDC3B-202ENST00000338056 GTF3C3Q9Y5Q9 886 aa22.8■■□□□ 1.24
RUNDC3B-202ENST00000338056 TRIM52Q96A61 297 aa22.78■■□□□ 1.24
RUNDC3B-202ENST00000338056 FBLN2P98095 1184 aa22.77■■□□□ 1.24
RUNDC3B-202ENST00000338056 ZNF316A6NFI3 1004 aaPredicted RBP22.75■■□□□ 1.23
RUNDC3B-202ENST00000338056 ERICH6Q7L0X2 663 aa22.75■■□□□ 1.23
RUNDC3B-202ENST00000338056 CECR2Q9BXF3 1484 aa22.71■■□□□ 1.23
RUNDC3B-202ENST00000338056 BCANQ96GW7 911 aa22.62■■□□□ 1.21
RUNDC3B-202ENST00000338056 ZNF326Q5BKZ1 582 aaKnown RBP22.6■■□□□ 1.21
RUNDC3B-202ENST00000338056 ACIN1Q9UKV3 1341 aaKnown RBP22.5■■□□□ 1.19
RUNDC3B-202ENST00000338056 ZNF777Q9ULD5 760 aaPredicted RBP22.41■■□□□ 1.18
RUNDC3B-202ENST00000338056 CEP162Q5TB80 1403 aa22.4■■□□□ 1.18
RUNDC3B-202ENST00000338056 RB1CC1Q8TDY2 1594 aa22.39■■□□□ 1.18
RUNDC3B-202ENST00000338056 CLIP1P30622 1438 aa22.39■■□□□ 1.17
RUNDC3B-202ENST00000338056 HIRIP3Q9BW71 556 aaPredicted RBP22.37■■□□□ 1.17
RUNDC3B-202ENST00000338056 CHIC2Q9UKJ5 165 aa22.36■■□□□ 1.17
RUNDC3B-202ENST00000338056 ANP32CO43423 234 aa22.34■■□□□ 1.17
RUNDC3B-202ENST00000338056 SLC4A1APQ9BWU0 796 aaKnown RBP22.33■■□□□ 1.17
RUNDC3B-202ENST00000338056 NACADO15069 1562 aa22.33■■□□□ 1.16
RUNDC3B-202ENST00000338056 DDX10Q13206 875 aaKnown RBP22.32■■□□□ 1.16
RUNDC3B-202ENST00000338056 WRNQ14191 1432 aaPredicted RBP eCLIP22.32■■□□□ 1.16
RUNDC3B-202ENST00000338056 MROH2BQ7Z745 1585 aa22.31■■□□□ 1.16
RUNDC3B-202ENST00000338056 SOGA1O94964 1423 aa22.3■■□□□ 1.16
RUNDC3B-202ENST00000338056 MIER1Q8N108 512 aa22.29■■□□□ 1.16
RUNDC3B-202ENST00000338056 SCAF1Q9H7N4 1312 aaKnown RBP22.23■■□□□ 1.15
RUNDC3B-202ENST00000338056 BAZ1BQ9UIG0 1483 aaKnown RBP22.16■■□□□ 1.14
RUNDC3B-202ENST00000338056 GOLGA3Q08378 1498 aa22.15■■□□□ 1.14
RUNDC3B-202ENST00000338056 TNIKQ9UKE5 1360 aa22.14■■□□□ 1.13
RUNDC3B-202ENST00000338056 ABCC8Q09428 1581 aa22.13■■□□□ 1.13
RUNDC3B-202ENST00000338056 BAZ1AQ9NRL2 1556 aaPredicted RBP22.13■■□□□ 1.13
RUNDC3B-202ENST00000338056 CCDC88BA6NC98 1476 aa22.1■■□□□ 1.13
RUNDC3B-202ENST00000338056 TONSLQ96HA7 1378 aa22.1■■□□□ 1.13
RUNDC3B-202ENST00000338056 RRP7BPQ9NSQ0 103 aa22.06■■□□□ 1.12
RUNDC3B-202ENST00000338056 EEA1Q15075 1411 aa22.05■■□□□ 1.12
RUNDC3B-202ENST00000338056 MTUS2Q5JR59 1369 aa22.04■■□□□ 1.12
RUNDC3B-202ENST00000338056 CDK11AQ9UQ88 783 aaPredicted RBP22.02■■□□□ 1.12
RUNDC3B-202ENST00000338056 FKBP8Q14318 412 aa22■■□□□ 1.11
RUNDC3B-202ENST00000338056 WIZO95785 1651 aa21.97■■□□□ 1.11
RUNDC3B-202ENST00000338056 HNRNPUQ00839 825 aaKnown RBP eCLIP21.97■■□□□ 1.11
RUNDC3B-202ENST00000338056 SIN3AQ96ST3 1273 aa21.97■■□□□ 1.11
RUNDC3B-202ENST00000338056 FAM9BQ8IZU0 186 aa21.96■■□□□ 1.11
RUNDC3B-202ENST00000338056 CEP164Q9UPV0 1460 aa21.95■■□□□ 1.1
RUNDC3B-202ENST00000338056 SENP3-EIF4A1A0A087X0R7 540 aa21.95■■□□□ 1.1
RUNDC3B-202ENST00000338056 MYT1Q01538 1121 aa21.93■■□□□ 1.1
RUNDC3B-202ENST00000338056 SALL2Q9Y467 1007 aaPredicted RBP21.93■■□□□ 1.1
RUNDC3B-202ENST00000338056 KANK4Q5T7N3 995 aaPredicted RBP21.93■■□□□ 1.1
RUNDC3B-202ENST00000338056 KIF27Q86VH2 1401 aa21.93■■□□□ 1.1
RUNDC3B-202ENST00000338056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.91■■□□□ 1.1
RUNDC3B-202ENST00000338056 DAXXQ9UER7 740 aaPredicted RBP21.91■■□□□ 1.1
RUNDC3B-202ENST00000338056 KDM2AQ9Y2K7 1162 aa21.9■■□□□ 1.1
RUNDC3B-202ENST00000338056 CHMP7Q8WUX9 453 aaPredicted RBP21.89■■□□□ 1.09
RUNDC3B-202ENST00000338056 CLSPNQ9HAW4 1339 aa21.86■■□□□ 1.09
RUNDC3B-202ENST00000338056 IRX6P78412 446 aaPredicted RBP21.84■■□□□ 1.09
RUNDC3B-202ENST00000338056 RUSC2Q8N2Y8 1516 aa21.82■■□□□ 1.08
RUNDC3B-202ENST00000338056 CHGAP10645 457 aaKnown RBP21.77■■□□□ 1.08
RUNDC3B-202ENST00000338056 CUX2O14529 1486 aa21.76■■□□□ 1.07
RUNDC3B-202ENST00000338056 BCL11AQ9H165 835 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms