RNA–Protein interactions for RNA: ENST00000336349.5

SPTY2D1-201, Transcript of SPT2 chromatin protein domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTY2D1, Length 5,754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTY2D1-201ENST00000336349 DCAF8L2P0C7V8 631 aa20.56■□□□□ 0.88
SPTY2D1-201ENST00000336349 SUPT5HO00267 1087 aaKnown RBP20■□□□□ 0.79
SPTY2D1-201ENST00000336349 EHMT2Q96KQ7 1210 aa19.76■□□□□ 0.75
SPTY2D1-201ENST00000336349 PELP1Q8IZL8 1130 aaKnown RBP19.44■□□□□ 0.7
SPTY2D1-201ENST00000336349 SHROOM4Q9ULL8 1493 aa19.44■□□□□ 0.7
SPTY2D1-201ENST00000336349 PCGF6Q9BYE7 350 aa19.28■□□□□ 0.68
SPTY2D1-201ENST00000336349 TTBK1Q5TCY1 1321 aaPredicted RBP19.14■□□□□ 0.65
SPTY2D1-201ENST00000336349 FAM9AQ8IZU1 332 aaPredicted RBP18.99■□□□□ 0.63
SPTY2D1-201ENST00000336349 ERICH6Q7L0X2 663 aa18.93■□□□□ 0.62
SPTY2D1-201ENST00000336349 CENPBP07199 599 aaPredicted RBP18.89■□□□□ 0.61
SPTY2D1-201ENST00000336349 YTHDC1Q96MU7 727 aaKnown RBP18.78■□□□□ 0.6
SPTY2D1-201ENST00000336349 APLP2Q06481 763 aa18.78■□□□□ 0.6
SPTY2D1-201ENST00000336349 CCER1Q8TC90 406 aaPredicted RBP18.68■□□□□ 0.58
SPTY2D1-201ENST00000336349 RANGAP1P46060 587 aaPredicted RBP18.58■□□□□ 0.57
SPTY2D1-201ENST00000336349 MYT1Q01538 1121 aa18.57■□□□□ 0.56
SPTY2D1-201ENST00000336349 ZEB1P37275 1124 aaPredicted RBP18.53■□□□□ 0.56
SPTY2D1-201ENST00000336349 NISCHQ9Y2I1 1504 aa18.52■□□□□ 0.55
SPTY2D1-201ENST00000336349 PPARGC1BQ86YN6 1023 aaKnown RBP18.44■□□□□ 0.54
SPTY2D1-201ENST00000336349 NEFLP07196 543 aa18.37■□□□□ 0.53
SPTY2D1-201ENST00000336349 HRCP23327 699 aa18.26■□□□□ 0.51
SPTY2D1-201ENST00000336349 TRIM41Q8WV44 630 aa18.24■□□□□ 0.51
SPTY2D1-201ENST00000336349 ATP1B4Q9UN42 357 aaPredicted RBP18.2■□□□□ 0.5
SPTY2D1-201ENST00000336349 UBTFP17480 764 aaKnown RBP18.09■□□□□ 0.49
SPTY2D1-201ENST00000336349 TRIM26Q12899 539 aaPredicted RBP18.03■□□□□ 0.48
SPTY2D1-201ENST00000336349 LOC105371045A0A1W2PR82 267 aa17.93■□□□□ 0.46
SPTY2D1-201ENST00000336349 CNGB1Q14028 1251 aaPredicted RBP17.93■□□□□ 0.46
SPTY2D1-201ENST00000336349 DAXXQ9UER7 740 aaPredicted RBP17.87■□□□□ 0.45
SPTY2D1-201ENST00000336349 ITGAEP38570 1179 aa17.84■□□□□ 0.45
SPTY2D1-201ENST00000336349 POLR3GLQ9BT43 218 aa17.83■□□□□ 0.45
SPTY2D1-201ENST00000336349 HNRNPUL2Q1KMD3 747 aaKnown RBP17.77■□□□□ 0.44
SPTY2D1-201ENST00000336349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.76■□□□□ 0.43
SPTY2D1-201ENST00000336349 GTF3C3Q9Y5Q9 886 aa17.75■□□□□ 0.43
SPTY2D1-201ENST00000336349 DIEXFQ68CQ4 756 aaKnown RBP17.74■□□□□ 0.43
SPTY2D1-201ENST00000336349 BCANQ96GW7 911 aa17.74■□□□□ 0.43
SPTY2D1-201ENST00000336349 RTL5Q5HYW3 569 aaPredicted RBP17.68■□□□□ 0.42
SPTY2D1-201ENST00000336349 CHIC1Q5VXU3 224 aa17.57■□□□□ 0.4
SPTY2D1-201ENST00000336349 ZNF316A6NFI3 1004 aaPredicted RBP17.5■□□□□ 0.39
SPTY2D1-201ENST00000336349 CLSPNQ9HAW4 1339 aa17.46■□□□□ 0.39
SPTY2D1-201ENST00000336349 ACIN1Q9UKV3 1341 aaKnown RBP17.32■□□□□ 0.36
SPTY2D1-201ENST00000336349 SLC4A1APQ9BWU0 796 aaKnown RBP17.26■□□□□ 0.35
SPTY2D1-201ENST00000336349 CDK11AQ9UQ88 783 aaPredicted RBP17.26■□□□□ 0.35
SPTY2D1-201ENST00000336349 NEUROD1Q13562 356 aa17.26■□□□□ 0.35
SPTY2D1-201ENST00000336349 EIF5BO60841 1220 aaKnown RBP17.24■□□□□ 0.35
SPTY2D1-201ENST00000336349 MYT1LQ9UL68 1186 aa17.24■□□□□ 0.35
SPTY2D1-201ENST00000336349 BCL11AQ9H165 835 aa17.14■□□□□ 0.33
SPTY2D1-201ENST00000336349 FAM50AQ14320 339 aaKnown RBP17.13■□□□□ 0.33
SPTY2D1-201ENST00000336349 NPM2Q86SE8 214 aaKnown RBP17.11■□□□□ 0.33
SPTY2D1-201ENST00000336349 ANP32CO43423 234 aa17.09■□□□□ 0.33
SPTY2D1-201ENST00000336349 ZNF326Q5BKZ1 582 aaKnown RBP17.03■□□□□ 0.32
SPTY2D1-201ENST00000336349 TRIM52Q96A61 297 aa17.03■□□□□ 0.32
SPTY2D1-201ENST00000336349 FKBP8Q14318 412 aa17.01■□□□□ 0.31
SPTY2D1-201ENST00000336349 SCAF1Q9H7N4 1312 aaKnown RBP17.01■□□□□ 0.31
SPTY2D1-201ENST00000336349 ANP32AP39687 249 aaKnown RBP16.98■□□□□ 0.31
SPTY2D1-201ENST00000336349 NBR1Q14596 966 aa16.96■□□□□ 0.3
SPTY2D1-201ENST00000336349 ARXQ96QS3 562 aa16.85■□□□□ 0.29
SPTY2D1-201ENST00000336349 CANXP27824 592 aaKnown RBP16.84■□□□□ 0.29
SPTY2D1-201ENST00000336349 ZBTB47Q9UFB7 747 aaPredicted RBP16.78■□□□□ 0.28
SPTY2D1-201ENST00000336349 IRX6P78412 446 aaPredicted RBP16.74■□□□□ 0.27
SPTY2D1-201ENST00000336349 HNRNPUQ00839 825 aaKnown RBP eCLIP16.74■□□□□ 0.27
SPTY2D1-201ENST00000336349 SALL2Q9Y467 1007 aaPredicted RBP16.72■□□□□ 0.27
SPTY2D1-201ENST00000336349 DDX10Q13206 875 aaKnown RBP16.71■□□□□ 0.27
SPTY2D1-201ENST00000336349 SLC24A1O60721 1099 aa16.7■□□□□ 0.26
SPTY2D1-201ENST00000336349 FAM9BQ8IZU0 186 aa16.69■□□□□ 0.26
SPTY2D1-201ENST00000336349 GLIPR1L2Q4G1C9 344 aa16.66■□□□□ 0.26
SPTY2D1-201ENST00000336349 MIER1Q8N108 512 aa16.65■□□□□ 0.26
SPTY2D1-201ENST00000336349 ARID3CA6NKF2 412 aa16.62■□□□□ 0.25
SPTY2D1-201ENST00000336349 HSP90AA1P07900 732 aaKnown RBP16.61■□□□□ 0.25
SPTY2D1-201ENST00000336349 P3H3Q8IVL6 736 aa16.6■□□□□ 0.25
SPTY2D1-201ENST00000336349 ANP32BQ92688 251 aaKnown RBP16.6■□□□□ 0.25
SPTY2D1-201ENST00000336349 CCDC136Q96JN2 1154 aa16.59■□□□□ 0.25
SPTY2D1-201ENST00000336349 RTN4Q9NQC3 1192 aaKnown RBP16.57■□□□□ 0.24
SPTY2D1-201ENST00000336349 HIRIP3Q9BW71 556 aaPredicted RBP16.55■□□□□ 0.24
SPTY2D1-201ENST00000336349 ANP32EQ9BTT0 268 aa16.52■□□□□ 0.24
SPTY2D1-201ENST00000336349 SENP3-EIF4A1A0A087X0R7 540 aa16.51■□□□□ 0.23
SPTY2D1-201ENST00000336349 UPF2Q9HAU5 1272 aaKnown RBP16.46■□□□□ 0.23
SPTY2D1-201ENST00000336349 NEFMP07197 916 aa16.41■□□□□ 0.22
SPTY2D1-201ENST00000336349 TONSLQ96HA7 1378 aa16.4■□□□□ 0.22
SPTY2D1-201ENST00000336349 ZNF777Q9ULD5 760 aaPredicted RBP16.39■□□□□ 0.21
SPTY2D1-201ENST00000336349 MRS2Q9HD23 443 aa16.39■□□□□ 0.21
SPTY2D1-201ENST00000336349 CSRNP3Q8WYN3 585 aa16.38■□□□□ 0.21
SPTY2D1-201ENST00000336349 PABPN1Q86U42 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
SPTY2D1-201ENST00000336349 TMC1Q8TDI8 760 aa16.36■□□□□ 0.21
SPTY2D1-201ENST00000336349 FBLN2P98095 1184 aa16.32■□□□□ 0.2
SPTY2D1-201ENST00000336349 LAS1LQ9Y4W2 734 aaKnown RBP16.32■□□□□ 0.2
SPTY2D1-201ENST00000336349 DCAF1Q9Y4B6 1507 aa16.28■□□□□ 0.2
SPTY2D1-201ENST00000336349 SUPT16HQ9Y5B9 1047 aaKnown RBP16.28■□□□□ 0.2
SPTY2D1-201ENST00000336349 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.26■□□□□ 0.19
SPTY2D1-201ENST00000336349 CHIC2Q9UKJ5 165 aa16.26■□□□□ 0.19
SPTY2D1-201ENST00000336349 TRIM44Q96DX7 344 aaPredicted RBP16.24■□□□□ 0.19
SPTY2D1-201ENST00000336349 NAP1L5Q96NT1 182 aaPredicted RBP16.21■□□□□ 0.19
SPTY2D1-201ENST00000336349 TPRNQ4KMQ1 711 aa16.21■□□□□ 0.19
SPTY2D1-201ENST00000336349 CHGAP10645 457 aaKnown RBP16.2■□□□□ 0.18
SPTY2D1-201ENST00000336349 KDM2AQ9Y2K7 1162 aa16.19■□□□□ 0.18
SPTY2D1-201ENST00000336349 NCLP19338 710 aaKnown RBP16.17■□□□□ 0.18
SPTY2D1-201ENST00000336349 WDR43Q15061 677 aaKnown RBP eCLIP16.16■□□□□ 0.18
SPTY2D1-201ENST00000336349 DEKP35659 375 aaKnown RBP16.13■□□□□ 0.17
SPTY2D1-201ENST00000336349 ARID4BQ4LE39 1312 aaPredicted RBP16.13■□□□□ 0.17
SPTY2D1-201ENST00000336349 DDRGK1Q96HY6 314 aa16.12■□□□□ 0.17
SPTY2D1-201ENST00000336349 NOP58Q9Y2X3 529 aaKnown RBP16.12■□□□□ 0.17
SPTY2D1-201ENST00000336349 B4GALNT3Q6L9W6 998 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms