RNA–Protein interactions for RNA: ENST00000336184.6

TRAF5-202, Transcript of TNF receptor associated factor 5, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRAF5, Length 3,972 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF5-202ENST00000336184 NISCHQ9Y2I1 1504 aa14.36□□□□□ -0.11
TRAF5-202ENST00000336184 DCAF8L2P0C7V8 631 aa13.28□□□□□ -0.28
TRAF5-202ENST00000336184 SHROOM4Q9ULL8 1493 aa12.88□□□□□ -0.35
TRAF5-202ENST00000336184 SUPT5HO00267 1087 aaKnown RBP12.65□□□□□ -0.38
TRAF5-202ENST00000336184 ABCC9O60706 1549 aa12.18□□□□□ -0.46
TRAF5-202ENST00000336184 CCDC180Q9P1Z9 1646 aa12.01□□□□□ -0.49
TRAF5-202ENST00000336184 EHMT2Q96KQ7 1210 aa12□□□□□ -0.49
TRAF5-202ENST00000336184 ZCCHC6Q5VYS8 1495 aaKnown RBP11.97□□□□□ -0.49
TRAF5-202ENST00000336184 PABPN1Q86U42 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRAF5-202ENST00000336184 FAM9AQ8IZU1 332 aaPredicted RBP11.84□□□□□ -0.51
TRAF5-202ENST00000336184 SCRIBQ14160 1630 aa11.74□□□□□ -0.53
TRAF5-202ENST00000336184 CHIC1Q5VXU3 224 aa11.67□□□□□ -0.54
TRAF5-202ENST00000336184 TRIM41Q8WV44 630 aa11.67□□□□□ -0.54
TRAF5-202ENST00000336184 LOC105371045A0A1W2PR82 267 aa11.56□□□□□ -0.56
TRAF5-202ENST00000336184 TTBK1Q5TCY1 1321 aaPredicted RBP11.49□□□□□ -0.57
TRAF5-202ENST00000336184 RANGAP1P46060 587 aaPredicted RBP11.48□□□□□ -0.57
TRAF5-202ENST00000336184 DCAF1Q9Y4B6 1507 aa11.46□□□□□ -0.58
TRAF5-202ENST00000336184 NACADO15069 1562 aa11.43□□□□□ -0.58
TRAF5-202ENST00000336184 RB1CC1Q8TDY2 1594 aa11.43□□□□□ -0.58
TRAF5-202ENST00000336184 PCGF6Q9BYE7 350 aa11.43□□□□□ -0.58
TRAF5-202ENST00000336184 PPARGC1BQ86YN6 1023 aaKnown RBP11.39□□□□□ -0.59
TRAF5-202ENST00000336184 CECR2Q9BXF3 1484 aa11.38□□□□□ -0.59
TRAF5-202ENST00000336184 RSF1Q96T23 1441 aaPredicted RBP11.37□□□□□ -0.59
TRAF5-202ENST00000336184 UBTFP17480 764 aaKnown RBP11.34□□□□□ -0.59
TRAF5-202ENST00000336184 MYO15BQ96JP2 1530 aa11.22□□□□□ -0.61
TRAF5-202ENST00000336184 MROH2BQ7Z745 1585 aa11.22□□□□□ -0.61
TRAF5-202ENST00000336184 APLP2Q06481 763 aa11.17□□□□□ -0.62
TRAF5-202ENST00000336184 ATP1B4Q9UN42 357 aaPredicted RBP11.14□□□□□ -0.63
TRAF5-202ENST00000336184 WIZO95785 1651 aa11.1□□□□□ -0.63
TRAF5-202ENST00000336184 BAZ1AQ9NRL2 1556 aaPredicted RBP11.1□□□□□ -0.63
TRAF5-202ENST00000336184 TRIM26Q12899 539 aaPredicted RBP11.02□□□□□ -0.64
TRAF5-202ENST00000336184 BAZ1BQ9UIG0 1483 aaKnown RBP11.02□□□□□ -0.65
TRAF5-202ENST00000336184 CSRNP3Q8WYN3 585 aa11.01□□□□□ -0.65
TRAF5-202ENST00000336184 CCDC88BA6NC98 1476 aa10.99□□□□□ -0.65
TRAF5-202ENST00000336184 CCER1Q8TC90 406 aaPredicted RBP10.95□□□□□ -0.66
TRAF5-202ENST00000336184 SMARCA4P51532 1647 aa10.93□□□□□ -0.66
TRAF5-202ENST00000336184 ABCC8Q09428 1581 aa10.93□□□□□ -0.66
TRAF5-202ENST00000336184 ITGAEP38570 1179 aa10.91□□□□□ -0.66
TRAF5-202ENST00000336184 HNRNPUL2Q1KMD3 747 aaKnown RBP10.91□□□□□ -0.66
TRAF5-202ENST00000336184 P3H3Q8IVL6 736 aa10.89□□□□□ -0.67
TRAF5-202ENST00000336184 WRNQ14191 1432 aaPredicted RBP eCLIP10.88□□□□□ -0.67
TRAF5-202ENST00000336184 ATAD2BQ9ULI0 1458 aa10.88□□□□□ -0.67
TRAF5-202ENST00000336184 TOP2AP11388 1531 aaKnown RBP10.87□□□□□ -0.67
TRAF5-202ENST00000336184 HRCP23327 699 aa10.87□□□□□ -0.67
TRAF5-202ENST00000336184 SOGA1O94964 1423 aa10.86□□□□□ -0.67
TRAF5-202ENST00000336184 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.85□□□□□ -0.67
TRAF5-202ENST00000336184 BICRAQ9NZM4 1560 aa10.83□□□□□ -0.68
TRAF5-202ENST00000336184 FBLN2P98095 1184 aa10.82□□□□□ -0.68
TRAF5-202ENST00000336184 SMARCA2P51531 1590 aa10.8□□□□□ -0.68
TRAF5-202ENST00000336184 UNC13AQ9UPW8 1703 aa10.8□□□□□ -0.68
TRAF5-202ENST00000336184 ARID3CA6NKF2 412 aa10.78□□□□□ -0.68
TRAF5-202ENST00000336184 RUSC2Q8N2Y8 1516 aa10.75□□□□□ -0.69
TRAF5-202ENST00000336184 EIF4G1Q04637 1599 aaKnown RBP10.73□□□□□ -0.69
TRAF5-202ENST00000336184 ZEB1P37275 1124 aaPredicted RBP10.72□□□□□ -0.69
TRAF5-202ENST00000336184 DNAJC5BQ9UF47 199 aa10.71□□□□□ -0.7
TRAF5-202ENST00000336184 CEP162Q5TB80 1403 aa10.7□□□□□ -0.7
TRAF5-202ENST00000336184 FAM50AQ14320 339 aaKnown RBP10.68□□□□□ -0.7
TRAF5-202ENST00000336184 CLIP1P30622 1438 aa10.66□□□□□ -0.7
TRAF5-202ENST00000336184 GOLGA3Q08378 1498 aa10.66□□□□□ -0.7
TRAF5-202ENST00000336184 CADPSQ9ULU8 1353 aa10.65□□□□□ -0.7
TRAF5-202ENST00000336184 EEA1Q15075 1411 aa10.64□□□□□ -0.71
TRAF5-202ENST00000336184 KIF27Q86VH2 1401 aa10.63□□□□□ -0.71
TRAF5-202ENST00000336184 CUX2O14529 1486 aa10.63□□□□□ -0.71
TRAF5-202ENST00000336184 NCAPD3P42695 1498 aa10.63□□□□□ -0.71
TRAF5-202ENST00000336184 TNIKQ9UKE5 1360 aa10.62□□□□□ -0.71
TRAF5-202ENST00000336184 CEP164Q9UPV0 1460 aa10.6□□□□□ -0.71
TRAF5-202ENST00000336184 TDRD9Q8NDG6 1382 aaKnown RBP10.59□□□□□ -0.71
TRAF5-202ENST00000336184 CC2D2AQ9P2K1 1620 aa10.58□□□□□ -0.72
TRAF5-202ENST00000336184 NESP48681 1621 aa10.57□□□□□ -0.72
TRAF5-202ENST00000336184 RAPGEF2Q9Y4G8 1499 aa10.55□□□□□ -0.72
TRAF5-202ENST00000336184 CARMIL1Q5VZK9 1371 aa10.55□□□□□ -0.72
TRAF5-202ENST00000336184 ERCC6Q03468 1493 aa10.54□□□□□ -0.72
TRAF5-202ENST00000336184 SYNJ1O43426 1573 aa10.54□□□□□ -0.72
TRAF5-202ENST00000336184 FANCD2Q9BXW9 1451 aa10.54□□□□□ -0.72
TRAF5-202ENST00000336184 CHMP7Q8WUX9 453 aaPredicted RBP10.53□□□□□ -0.72
TRAF5-202ENST00000336184 NEUROD1Q13562 356 aa10.5□□□□□ -0.73
TRAF5-202ENST00000336184 PELP1Q8IZL8 1130 aaKnown RBP10.5□□□□□ -0.73
TRAF5-202ENST00000336184 PDS5BQ9NTI5 1447 aa10.5□□□□□ -0.73
TRAF5-202ENST00000336184 RAD54L2Q9Y4B4 1467 aa10.49□□□□□ -0.73
TRAF5-202ENST00000336184 YTHDC1Q96MU7 727 aaKnown RBP10.49□□□□□ -0.73
TRAF5-202ENST00000336184 KANK4Q5T7N3 995 aaPredicted RBP10.48□□□□□ -0.73
TRAF5-202ENST00000336184 CFTRP13569 1480 aa10.48□□□□□ -0.73
TRAF5-202ENST00000336184 MYT1LQ9UL68 1186 aa10.47□□□□□ -0.73
TRAF5-202ENST00000336184 ZNF777Q9ULD5 760 aaPredicted RBP10.47□□□□□ -0.73
TRAF5-202ENST00000336184 HMGXB3Q12766 1538 aa10.46□□□□□ -0.73
TRAF5-202ENST00000336184 FGD5Q6ZNL6 1462 aa10.46□□□□□ -0.73
TRAF5-202ENST00000336184 TRIM52Q96A61 297 aa10.46□□□□□ -0.73
TRAF5-202ENST00000336184 PEG3Q9GZU2 1588 aa10.45□□□□□ -0.74
TRAF5-202ENST00000336184 CHIC2Q9UKJ5 165 aa10.44□□□□□ -0.74
TRAF5-202ENST00000336184 CUX1P39880 1505 aa10.43□□□□□ -0.74
TRAF5-202ENST00000336184 IGF1RP08069 1367 aa10.42□□□□□ -0.74
TRAF5-202ENST00000336184 VPS8Q8N3P4 1428 aa10.41□□□□□ -0.74
TRAF5-202ENST00000336184 MTUS2Q5JR59 1369 aa10.4□□□□□ -0.74
TRAF5-202ENST00000336184 CNGB1Q14028 1251 aaPredicted RBP10.38□□□□□ -0.75
TRAF5-202ENST00000336184 DIEXFQ68CQ4 756 aaKnown RBP10.38□□□□□ -0.75
TRAF5-202ENST00000336184 FHOD3Q2V2M9 1422 aa10.36□□□□□ -0.75
TRAF5-202ENST00000336184 TOP2BQ02880 1626 aa10.35□□□□□ -0.75
TRAF5-202ENST00000336184 POLR3GLQ9BT43 218 aa10.35□□□□□ -0.75
TRAF5-202ENST00000336184 AQRO60306 1485 aaKnown RBP eCLIP10.35□□□□□ -0.75
TRAF5-202ENST00000336184 MYT1Q01538 1121 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms