RNA–Protein interactions for RNA: ENST00000335647.9

KATNA1-202, Transcript of katanin catalytic subunit A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KATNA1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-202ENST00000335647 AEBP2Q6ZN18 517 aaPredicted RBP16.11■□□□□ 0.17
KATNA1-202ENST00000335647 CHIC1Q5VXU3 224 aa15.79■□□□□ 0.12
KATNA1-202ENST00000335647 PHF23Q9BUL5 403 aaPredicted RBP13.89□□□□□ -0.19
KATNA1-202ENST00000335647 SENP3Q9H4L4 574 aaPredicted RBP13.65□□□□□ -0.22
KATNA1-202ENST00000335647 POTEDQ86YR6 584 aa12.89□□□□□ -0.35
KATNA1-202ENST00000335647 PLPPR3Q6T4P5 718 aa12.83□□□□□ -0.35
KATNA1-202ENST00000335647 FOXD1Q16676 465 aa12.67□□□□□ -0.38
KATNA1-202ENST00000335647 PPP6R1Q9UPN7 881 aa12.23□□□□□ -0.45
KATNA1-202ENST00000335647 ADRA2BP18089 450 aa12.21□□□□□ -0.45
KATNA1-202ENST00000335647 PIAS4Q8N2W9 510 aaPredicted RBP11.94□□□□□ -0.5
KATNA1-202ENST00000335647 MSH5O43196 834 aa11.65□□□□□ -0.54
KATNA1-202ENST00000335647 PPP4R3CPQ6ZMV5 832 aa11.31□□□□□ -0.6
KATNA1-202ENST00000335647 SCAF1Q9H7N4 1312 aaKnown RBP11.17□□□□□ -0.62
KATNA1-202ENST00000335647 KCNA4P22459 653 aa11.11□□□□□ -0.63
KATNA1-202ENST00000335647 MAPK8IP2Q13387 824 aaPredicted RBP11.07□□□□□ -0.64
KATNA1-202ENST00000335647 NCBP3Q53F19 620 aaKnown RBP11.02□□□□□ -0.64
KATNA1-202ENST00000335647 CNKSR2Q8WXI2 1034 aa10.98□□□□□ -0.65
KATNA1-202ENST00000335647 DMRT2Q9Y5R5 561 aa10.92□□□□□ -0.66
KATNA1-202ENST00000335647 NPM3O75607 178 aaKnown RBP10.88□□□□□ -0.67
KATNA1-202ENST00000335647 RNF216Q9NWF9 866 aaPredicted RBP10.76□□□□□ -0.69
KATNA1-202ENST00000335647 HOXD11P31277 338 aaPredicted RBP10.72□□□□□ -0.69
KATNA1-202ENST00000335647 DNAJC5BQ9UF47 199 aa10.6□□□□□ -0.71
KATNA1-202ENST00000335647 SLC4A1APQ9BWU0 796 aaKnown RBP10.59□□□□□ -0.71
KATNA1-202ENST00000335647 DCAF8L1A6NGE4 600 aa10.39□□□□□ -0.75
KATNA1-202ENST00000335647 EHMT2Q96KQ7 1210 aa10.34□□□□□ -0.75
KATNA1-202ENST00000335647 CACNB1Q02641 598 aaPredicted RBP10.29□□□□□ -0.76
KATNA1-202ENST00000335647 SLC4A2P04920 1241 aa10.27□□□□□ -0.77
KATNA1-202ENST00000335647 ZBTB22O15209 634 aa10.25□□□□□ -0.77
KATNA1-202ENST00000335647 CSRNP3Q8WYN3 585 aa10.22□□□□□ -0.77
KATNA1-202ENST00000335647 FOXD4L1Q9NU39 408 aa10.22□□□□□ -0.77
KATNA1-202ENST00000335647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.18□□□□□ -0.78
KATNA1-202ENST00000335647 U3KPZ7 1027 aaPredicted RBP10.05□□□□□ -0.8
KATNA1-202ENST00000335647 MYCNP04198 464 aaPredicted RBP10.04□□□□□ -0.8
KATNA1-202ENST00000335647 RNF39Q9H2S5 420 aa10□□□□□ -0.81
KATNA1-202ENST00000335647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.93□□□□□ -0.82
KATNA1-202ENST00000335647 HNRNPUL2Q1KMD3 747 aaKnown RBP9.93□□□□□ -0.82
KATNA1-202ENST00000335647 SAMD1Q6SPF0 538 aaPredicted RBP9.9□□□□□ -0.82
KATNA1-202ENST00000335647 C1QBPQ07021 282 aaKnown RBP9.88□□□□□ -0.83
KATNA1-202ENST00000335647 POTEHQ6S545 545 aa9.88□□□□□ -0.83
KATNA1-202ENST00000335647 ATXN8OSP0DMR3 200 aa9.87□□□□□ -0.83
KATNA1-202ENST00000335647 APLP2Q06481 763 aa9.8□□□□□ -0.84
KATNA1-202ENST00000335647 ATF5Q9Y2D1 282 aaPredicted RBP9.77□□□□□ -0.84
KATNA1-202ENST00000335647 SPINK5Q9NQ38 1064 aaPredicted RBP9.74□□□□□ -0.85
KATNA1-202ENST00000335647 CAPN15O75808 1086 aa9.68□□□□□ -0.86
KATNA1-202ENST00000335647 ZNF219Q9P2Y4 722 aaPredicted RBP9.67□□□□□ -0.86
KATNA1-202ENST00000335647 TRHP20396 242 aaPredicted RBP9.64□□□□□ -0.87
KATNA1-202ENST00000335647 NISCHQ9Y2I1 1504 aa9.57□□□□□ -0.88
KATNA1-202ENST00000335647 DSG3P32926 999 aa9.53□□□□□ -0.88
KATNA1-202ENST00000335647 POLA2Q14181 598 aa9.52□□□□□ -0.89
KATNA1-202ENST00000335647 ABCB7O75027 752 aa9.5□□□□□ -0.89
KATNA1-202ENST00000335647 ZBTB12Q9Y330 459 aaPredicted RBP9.38□□□□□ -0.91
KATNA1-202ENST00000335647 ABCC9O60706 1549 aa9.37□□□□□ -0.91
KATNA1-202ENST00000335647 MKRN4PQ13434 485 aaPredicted RBP9.36□□□□□ -0.91
KATNA1-202ENST00000335647 FBLN2P98095 1184 aa9.34□□□□□ -0.91
KATNA1-202ENST00000335647 FKBP8Q14318 412 aa9.22□□□□□ -0.93
KATNA1-202ENST00000335647 OSCARQ8IYS5 282 aa9.2□□□□□ -0.94
KATNA1-202ENST00000335647 SPDYE4A6NLX3 237 aa9.16□□□□□ -0.94
KATNA1-202ENST00000335647 SPDYE2BA6NHP3 402 aa9.13□□□□□ -0.95
KATNA1-202ENST00000335647 SPDYE6P0CI01 402 aa9.13□□□□□ -0.95
KATNA1-202ENST00000335647 SPDYE2Q495Y8 402 aa9.13□□□□□ -0.95
KATNA1-202ENST00000335647 ZNF692Q9BU19 519 aaPredicted RBP9.09□□□□□ -0.95
KATNA1-202ENST00000335647 RBM42Q9BTD8 480 aaKnown RBP9.07□□□□□ -0.96
KATNA1-202ENST00000335647 SSUH2Q9Y2M2 353 aa9.07□□□□□ -0.96
KATNA1-202ENST00000335647 PROM2Q8N271 834 aa9.06□□□□□ -0.96
KATNA1-202ENST00000335647 AKT1S1Q96B36 256 aa8.97□□□□□ -0.97
KATNA1-202ENST00000335647 PABPN1Q86U42 306 aaKnown RBP eCLIP8.97□□□□□ -0.97
KATNA1-202ENST00000335647 DNAJC5Q9H3Z4 198 aa8.96□□□□□ -0.98
KATNA1-202ENST00000335647 REM2Q8IYK8 340 aaPredicted RBP8.88□□□□□ -0.99
KATNA1-202ENST00000335647 FBXO3Q9UK99 471 aa8.88□□□□□ -0.99
KATNA1-202ENST00000335647 CCDC180Q9P1Z9 1646 aa8.85□□□□□ -0.99
KATNA1-202ENST00000335647 STAG3Q9UJ98 1225 aa8.84□□□□□ -0.99
KATNA1-202ENST00000335647 SPDYE1Q8NFV5 336 aaPredicted RBP8.83□□□□□ -1
KATNA1-202ENST00000335647 PITPNM1O00562 1244 aa8.79□□□□□ -1
KATNA1-202ENST00000335647 CLEC11AQ9Y240 323 aa8.77□□□□□ -1.01
KATNA1-202ENST00000335647 VASPP50552 380 aaPredicted RBP8.76□□□□□ -1.01
KATNA1-202ENST00000335647 PRR29P0C7W0 189 aa8.72□□□□□ -1.01
KATNA1-202ENST00000335647 RB1CC1Q8TDY2 1594 aa8.71□□□□□ -1.01
KATNA1-202ENST00000335647 SP7Q8TDD2 431 aaPredicted RBP8.7□□□□□ -1.02
KATNA1-202ENST00000335647 CHRDL2Q6WN34 429 aa8.68□□□□□ -1.02
KATNA1-202ENST00000335647 MIER1Q8N108 512 aa8.67□□□□□ -1.02
KATNA1-202ENST00000335647 IFNLR1Q8IU57 520 aaPredicted RBP8.65□□□□□ -1.02
KATNA1-202ENST00000335647 PLCD3Q8N3E9 789 aa8.65□□□□□ -1.02
KATNA1-202ENST00000335647 PLSCR2Q9NRY7 297 aa8.64□□□□□ -1.03
KATNA1-202ENST00000335647 CREBZFQ9NS37 354 aa8.63□□□□□ -1.03
KATNA1-202ENST00000335647 FXR2P51116 673 aaKnown RBP eCLIP8.62□□□□□ -1.03
KATNA1-202ENST00000335647 PLEKHG5O94827 1062 aa8.61□□□□□ -1.03
KATNA1-202ENST00000335647 PIP4P2Q8N4L2 257 aa8.58□□□□□ -1.04
KATNA1-202ENST00000335647 ZBTB47Q9UFB7 747 aaPredicted RBP8.58□□□□□ -1.04
KATNA1-202ENST00000335647 KLHL34Q8N239 644 aa8.57□□□□□ -1.04
KATNA1-202ENST00000335647 MNX1P50219 401 aaPredicted RBP8.56□□□□□ -1.04
KATNA1-202ENST00000335647 CHADLQ6NUI6 762 aa8.56□□□□□ -1.04
KATNA1-202ENST00000335647 PRKAR2AP13861 404 aaKnown RBP8.56□□□□□ -1.04
KATNA1-202ENST00000335647 SPOCK2Q92563 424 aa8.53□□□□□ -1.04
KATNA1-202ENST00000335647 NACADO15069 1562 aa8.52□□□□□ -1.05
KATNA1-202ENST00000335647 CECR2Q9BXF3 1484 aa8.51□□□□□ -1.05
KATNA1-202ENST00000335647 AMER1Q5JTC6 1135 aaPredicted RBP8.5□□□□□ -1.05
KATNA1-202ENST00000335647 FARP1Q9Y4F1 1045 aaPredicted RBP8.5□□□□□ -1.05
KATNA1-202ENST00000335647 RTN4Q9NQC3 1192 aaKnown RBP8.49□□□□□ -1.05
KATNA1-202ENST00000335647 NPM1P06748 294 aaKnown RBP eCLIP8.47□□□□□ -1.05
KATNA1-202ENST00000335647 NUBP1P53384 320 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms