RNA–Protein interactions for RNA: ENST00000333957.8

C2CD5-201, Transcript of C2 calcium dependent domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD5, Length 4,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD5-201ENST00000333957 NISCHQ9Y2I1 1504 aa20.38■□□□□ 0.85
C2CD5-201ENST00000333957 DCAF8L2P0C7V8 631 aa19.18■□□□□ 0.66
C2CD5-201ENST00000333957 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.56
C2CD5-201ENST00000333957 SUPT5HO00267 1087 aaKnown RBP18.45■□□□□ 0.54
C2CD5-201ENST00000333957 EHMT2Q96KQ7 1210 aa17.42■□□□□ 0.38
C2CD5-201ENST00000333957 FAM9AQ8IZU1 332 aaPredicted RBP17.25■□□□□ 0.35
C2CD5-201ENST00000333957 TRIM41Q8WV44 630 aa17.12■□□□□ 0.33
C2CD5-201ENST00000333957 ABCC9O60706 1549 aa17.09■□□□□ 0.33
C2CD5-201ENST00000333957 ZCCHC6Q5VYS8 1495 aaKnown RBP17■□□□□ 0.31
C2CD5-201ENST00000333957 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
C2CD5-201ENST00000333957 PCGF6Q9BYE7 350 aa16.97■□□□□ 0.31
C2CD5-201ENST00000333957 CCDC180Q9P1Z9 1646 aa16.96■□□□□ 0.31
C2CD5-201ENST00000333957 TTBK1Q5TCY1 1321 aaPredicted RBP16.79■□□□□ 0.28
C2CD5-201ENST00000333957 APLP2Q06481 763 aa16.75■□□□□ 0.27
C2CD5-201ENST00000333957 LOC105371045A0A1W2PR82 267 aa16.74■□□□□ 0.27
C2CD5-201ENST00000333957 PABPN1Q86U42 306 aaKnown RBP eCLIP16.7■□□□□ 0.26
C2CD5-201ENST00000333957 RANGAP1P46060 587 aaPredicted RBP16.69■□□□□ 0.26
C2CD5-201ENST00000333957 UBTFP17480 764 aaKnown RBP16.67■□□□□ 0.26
C2CD5-201ENST00000333957 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
C2CD5-201ENST00000333957 PPARGC1BQ86YN6 1023 aaKnown RBP16.53■□□□□ 0.24
C2CD5-201ENST00000333957 TRIM26Q12899 539 aaPredicted RBP16.44■□□□□ 0.22
C2CD5-201ENST00000333957 CCER1Q8TC90 406 aaPredicted RBP16.39■□□□□ 0.22
C2CD5-201ENST00000333957 ZEB1P37275 1124 aaPredicted RBP16.37■□□□□ 0.21
C2CD5-201ENST00000333957 ATP1B4Q9UN42 357 aaPredicted RBP16.34■□□□□ 0.21
C2CD5-201ENST00000333957 DCAF1Q9Y4B6 1507 aa16.31■□□□□ 0.2
C2CD5-201ENST00000333957 HRCP23327 699 aa16.3■□□□□ 0.2
C2CD5-201ENST00000333957 NACADO15069 1562 aa16.22■□□□□ 0.19
C2CD5-201ENST00000333957 RSF1Q96T23 1441 aaPredicted RBP16.21■□□□□ 0.19
C2CD5-201ENST00000333957 RB1CC1Q8TDY2 1594 aa16.21■□□□□ 0.18
C2CD5-201ENST00000333957 MYO15BQ96JP2 1530 aa16.05■□□□□ 0.16
C2CD5-201ENST00000333957 HNRNPUL2Q1KMD3 747 aaKnown RBP16.04■□□□□ 0.16
C2CD5-201ENST00000333957 CSRNP3Q8WYN3 585 aa16.03■□□□□ 0.16
C2CD5-201ENST00000333957 CECR2Q9BXF3 1484 aa16.01■□□□□ 0.15
C2CD5-201ENST00000333957 ITGAEP38570 1179 aa16■□□□□ 0.15
C2CD5-201ENST00000333957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.97■□□□□ 0.15
C2CD5-201ENST00000333957 BAZ1AQ9NRL2 1556 aaPredicted RBP15.87■□□□□ 0.13
C2CD5-201ENST00000333957 CENPBP07199 599 aaPredicted RBP15.85■□□□□ 0.13
C2CD5-201ENST00000333957 MROH2BQ7Z745 1585 aa15.83■□□□□ 0.12
C2CD5-201ENST00000333957 YTHDC1Q96MU7 727 aaKnown RBP15.74■□□□□ 0.11
C2CD5-201ENST00000333957 BAZ1BQ9UIG0 1483 aaKnown RBP15.74■□□□□ 0.11
C2CD5-201ENST00000333957 FAM50AQ14320 339 aaKnown RBP15.7■□□□□ 0.1
C2CD5-201ENST00000333957 P3H3Q8IVL6 736 aa15.69■□□□□ 0.1
C2CD5-201ENST00000333957 PELP1Q8IZL8 1130 aaKnown RBP15.68■□□□□ 0.1
C2CD5-201ENST00000333957 WRNQ14191 1432 aaPredicted RBP eCLIP15.68■□□□□ 0.1
C2CD5-201ENST00000333957 WIZO95785 1651 aa15.62■□□□□ 0.09
C2CD5-201ENST00000333957 EEA1Q15075 1411 aa15.61■□□□□ 0.09
C2CD5-201ENST00000333957 CCDC88BA6NC98 1476 aa15.6■□□□□ 0.09
C2CD5-201ENST00000333957 DIEXFQ68CQ4 756 aaKnown RBP15.58■□□□□ 0.08
C2CD5-201ENST00000333957 FBLN2P98095 1184 aa15.57■□□□□ 0.08
C2CD5-201ENST00000333957 CEP162Q5TB80 1403 aa15.56■□□□□ 0.08
C2CD5-201ENST00000333957 CLIP1P30622 1438 aa15.55■□□□□ 0.08
C2CD5-201ENST00000333957 GOLGA3Q08378 1498 aa15.53■□□□□ 0.08
C2CD5-201ENST00000333957 SOGA1O94964 1423 aa15.51■□□□□ 0.07
C2CD5-201ENST00000333957 ABCC8Q09428 1581 aa15.51■□□□□ 0.07
C2CD5-201ENST00000333957 ARID3CA6NKF2 412 aa15.49■□□□□ 0.07
C2CD5-201ENST00000333957 TOP2AP11388 1531 aaKnown RBP15.49■□□□□ 0.07
C2CD5-201ENST00000333957 TNIKQ9UKE5 1360 aa15.48■□□□□ 0.07
C2CD5-201ENST00000333957 NEUROD1Q13562 356 aa15.47■□□□□ 0.07
C2CD5-201ENST00000333957 SMARCA4P51532 1647 aa15.44■□□□□ 0.06
C2CD5-201ENST00000333957 TRIM52Q96A61 297 aa15.44■□□□□ 0.06
C2CD5-201ENST00000333957 CEP164Q9UPV0 1460 aa15.43■□□□□ 0.06
C2CD5-201ENST00000333957 SMARCA2P51531 1590 aa15.43■□□□□ 0.06
C2CD5-201ENST00000333957 MYT1LQ9UL68 1186 aa15.43■□□□□ 0.06
C2CD5-201ENST00000333957 KIF27Q86VH2 1401 aa15.42■□□□□ 0.06
C2CD5-201ENST00000333957 ZNF316A6NFI3 1004 aaPredicted RBP15.39■□□□□ 0.05
C2CD5-201ENST00000333957 POLR3GLQ9BT43 218 aa15.38■□□□□ 0.05
C2CD5-201ENST00000333957 ATAD2BQ9ULI0 1458 aa15.37■□□□□ 0.05
C2CD5-201ENST00000333957 NEFLP07196 543 aa15.34■□□□□ 0.05
C2CD5-201ENST00000333957 CNGB1Q14028 1251 aaPredicted RBP15.29■□□□□ 0.04
C2CD5-201ENST00000333957 CDK11AQ9UQ88 783 aaPredicted RBP15.26■□□□□ 0.03
C2CD5-201ENST00000333957 CUX2O14529 1486 aa15.26■□□□□ 0.03
C2CD5-201ENST00000333957 ZNF777Q9ULD5 760 aaPredicted RBP15.25■□□□□ 0.03
C2CD5-201ENST00000333957 MTUS2Q5JR59 1369 aa15.23■□□□□ 0.03
C2CD5-201ENST00000333957 CARMIL1Q5VZK9 1371 aa15.2■□□□□ 0.02
C2CD5-201ENST00000333957 RUSC2Q8N2Y8 1516 aa15.19■□□□□ 0.02
C2CD5-201ENST00000333957 CHMP7Q8WUX9 453 aaPredicted RBP15.19■□□□□ 0.02
C2CD5-201ENST00000333957 ZNF326Q5BKZ1 582 aaKnown RBP15.18■□□□□ 0.02
C2CD5-201ENST00000333957 CHIC2Q9UKJ5 165 aa15.17■□□□□ 0.02
C2CD5-201ENST00000333957 CADPSQ9ULU8 1353 aa15.16■□□□□ 0.02
C2CD5-201ENST00000333957 VPS8Q8N3P4 1428 aa15.15■□□□□ 0.02
C2CD5-201ENST00000333957 TONSLQ96HA7 1378 aa15.1■□□□□ 0.01
C2CD5-201ENST00000333957 ANP32CO43423 234 aa15.1■□□□□ 0.01
C2CD5-201ENST00000333957 GTF3C3Q9Y5Q9 886 aa15.1■□□□□ 0.01
C2CD5-201ENST00000333957 RAPGEF2Q9Y4G8 1499 aa15.09■□□□□ 0.01
C2CD5-201ENST00000333957 KANK4Q5T7N3 995 aaPredicted RBP15.06■□□□□ 0
C2CD5-201ENST00000333957 TDRD9Q8NDG6 1382 aaKnown RBP15.05■□□□□ 0
C2CD5-201ENST00000333957 ACIN1Q9UKV3 1341 aaKnown RBP15.05■□□□□ -0
C2CD5-201ENST00000333957 PDS5BQ9NTI5 1447 aa15.04■□□□□ -0
C2CD5-201ENST00000333957 NCAPD3P42695 1498 aa15.04■□□□□ -0
C2CD5-201ENST00000333957 ERCC6Q03468 1493 aa15.04■□□□□ -0
C2CD5-201ENST00000333957 FHAD1B1AJZ9 1412 aa15.04■□□□□ -0
C2CD5-201ENST00000333957 RRP7BPQ9NSQ0 103 aa15.03■□□□□ -0
C2CD5-201ENST00000333957 EIF4G1Q04637 1599 aaKnown RBP15.03■□□□□ -0
C2CD5-201ENST00000333957 CCNB3Q8WWL7 1395 aa15.02□□□□□ -0.01
C2CD5-201ENST00000333957 DDX10Q13206 875 aaKnown RBP14.99□□□□□ -0.01
C2CD5-201ENST00000333957 ERICH6Q7L0X2 663 aa14.97□□□□□ -0.01
C2CD5-201ENST00000333957 BICRAQ9NZM4 1560 aa14.97□□□□□ -0.01
C2CD5-201ENST00000333957 FANCD2Q9BXW9 1451 aa14.97□□□□□ -0.01
C2CD5-201ENST00000333957 MIER1Q8N108 512 aa14.95□□□□□ -0.02
C2CD5-201ENST00000333957 TSPY4P0CV99 314 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms